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Search of human proteins with 50363230
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|50363230 RAB11 family interacting protein 1 isoform 2 [Homo
sapiens]
(612 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|50363230 RAB11 family interacting protein 1 isoform 2 [Homo s... 1214 0.0
gi|50659104 RAB11 family interacting protein 1 isoform 3 [Homo s... 1212 0.0
gi|50363228 RAB11 family interacting protein 1 isoform 1 [Homo s... 221 2e-57
gi|7662394 RAB11 family interacting protein 2 (class I) [Homo sa... 84 5e-16
gi|24308075 RAB11 family interacting protein 5 (class I) [Homo s... 72 2e-12
gi|50428935 BPY2 interacting protein 1 [Homo sapiens] 47 5e-05
gi|66392157 RGD motif, leucine rich repeats, tropomodulin domain... 45 3e-04
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 44 4e-04
gi|5031681 embryonal Fyn-associated substrate isoform 1 [Homo sa... 44 4e-04
gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e... 43 7e-04
gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d... 43 7e-04
gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a ... 43 7e-04
gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c ... 43 7e-04
gi|157909822 pragmin [Homo sapiens] 43 0.001
gi|150170670 piccolo isoform 2 [Homo sapiens] 42 0.001
gi|150378539 piccolo isoform 1 [Homo sapiens] 42 0.001
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 42 0.002
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 40 0.005
gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax ... 40 0.006
gi|38373671 SEC24-related protein C [Homo sapiens] 40 0.006
gi|38373669 SEC24-related protein C [Homo sapiens] 40 0.006
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 40 0.008
gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo ... 40 0.008
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 40 0.008
gi|239508790 PREDICTED: hypothetical protein, partial [Homo sapi... 39 0.011
gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens] 39 0.014
gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens] 39 0.014
gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens] 39 0.014
gi|46852390 coiled-coil domain containing 6 [Homo sapiens] 39 0.014
gi|226437579 NAC alpha domain containing [Homo sapiens] 39 0.018
>gi|50363230 RAB11 family interacting protein 1 isoform 2 [Homo
sapiens]
Length = 612
Score = 1214 bits (3141), Expect = 0.0
Identities = 612/612 (100%), Positives = 612/612 (100%)
Query: 1 MGRTRETGTEKNTSSLELEESLPEQPETGRQEEELPRFPCKKQDYSPSSGEAQEVPFALS 60
MGRTRETGTEKNTSSLELEESLPEQPETGRQEEELPRFPCKKQDYSPSSGEAQEVPFALS
Sbjct: 1 MGRTRETGTEKNTSSLELEESLPEQPETGRQEEELPRFPCKKQDYSPSSGEAQEVPFALS 60
Query: 61 LSSDGAVSPVGELAAGGDRDLESQAGSLVESKARDAAEEVAPPLPMGASVPSIDSMMRKL 120
LSSDGAVSPVGELAAGGDRDLESQAGSLVESKARDAAEEVAPPLPMGASVPSIDSMMRKL
Sbjct: 61 LSSDGAVSPVGELAAGGDRDLESQAGSLVESKARDAAEEVAPPLPMGASVPSIDSMMRKL 120
Query: 121 EEMGLNLRKDQKKTKKRVSFSEQLFTEEAVAGAALLVEGHSSCPQELNPAWSVAGNASDG 180
EEMGLNLRKDQKKTKKRVSFSEQLFTEEAVAGAALLVEGHSSCPQELNPAWSVAGNASDG
Sbjct: 121 EEMGLNLRKDQKKTKKRVSFSEQLFTEEAVAGAALLVEGHSSCPQELNPAWSVAGNASDG 180
Query: 181 EPPESPHAEDSERESVTTPGPATCGAPASPADHLLLPSQEESFSEVPMSEASSAKDTPLF 240
EPPESPHAEDSERESVTTPGPATCGAPASPADHLLLPSQEESFSEVPMSEASSAKDTPLF
Sbjct: 181 EPPESPHAEDSERESVTTPGPATCGAPASPADHLLLPSQEESFSEVPMSEASSAKDTPLF 240
Query: 241 RMEGEDALVTQYQSKASDHEGLLSDPLSDLQLVSDFKSPIMADLNLSLPSIPEVASDDER 300
RMEGEDALVTQYQSKASDHEGLLSDPLSDLQLVSDFKSPIMADLNLSLPSIPEVASDDER
Sbjct: 241 RMEGEDALVTQYQSKASDHEGLLSDPLSDLQLVSDFKSPIMADLNLSLPSIPEVASDDER 300
Query: 301 IDQVEDDGDQVEDDGETAKSSTLDIGALSLGLVVPCPERGKGPSGEADRLVLGEGLCDFR 360
IDQVEDDGDQVEDDGETAKSSTLDIGALSLGLVVPCPERGKGPSGEADRLVLGEGLCDFR
Sbjct: 301 IDQVEDDGDQVEDDGETAKSSTLDIGALSLGLVVPCPERGKGPSGEADRLVLGEGLCDFR 360
Query: 361 LQAPQASVTAPSEQTTEFGIHKPHLGKSSSLDKQLPGPSGGEEEKPMGNGSPSPPPGTSL 420
LQAPQASVTAPSEQTTEFGIHKPHLGKSSSLDKQLPGPSGGEEEKPMGNGSPSPPPGTSL
Sbjct: 361 LQAPQASVTAPSEQTTEFGIHKPHLGKSSSLDKQLPGPSGGEEEKPMGNGSPSPPPGTSL 420
Query: 421 DNPVPSPSPSEIFPVTHSFPSSAHSDTHHTSTAESQKKATAEGSAGRVENFGKRKPLLQA 480
DNPVPSPSPSEIFPVTHSFPSSAHSDTHHTSTAESQKKATAEGSAGRVENFGKRKPLLQA
Sbjct: 421 DNPVPSPSPSEIFPVTHSFPSSAHSDTHHTSTAESQKKATAEGSAGRVENFGKRKPLLQA 480
Query: 481 WVSPSETHPVSAQPGAGTGSAKHRLHPVKPMNAMATKVANCSLGTATIISENLNNEVMMK 540
WVSPSETHPVSAQPGAGTGSAKHRLHPVKPMNAMATKVANCSLGTATIISENLNNEVMMK
Sbjct: 481 WVSPSETHPVSAQPGAGTGSAKHRLHPVKPMNAMATKVANCSLGTATIISENLNNEVMMK 540
Query: 541 KYSPSDPAFAYAQLTHDELIQLVLKQKETISKKEFQVRELEDYIDNLLVRVMEETPNILR 600
KYSPSDPAFAYAQLTHDELIQLVLKQKETISKKEFQVRELEDYIDNLLVRVMEETPNILR
Sbjct: 541 KYSPSDPAFAYAQLTHDELIQLVLKQKETISKKEFQVRELEDYIDNLLVRVMEETPNILR 600
Query: 601 IPTQVGKKAGKM 612
IPTQVGKKAGKM
Sbjct: 601 IPTQVGKKAGKM 612
>gi|50659104 RAB11 family interacting protein 1 isoform 3 [Homo
sapiens]
Length = 1283
Score = 1212 bits (3135), Expect = 0.0
Identities = 611/612 (99%), Positives = 611/612 (99%)
Query: 1 MGRTRETGTEKNTSSLELEESLPEQPETGRQEEELPRFPCKKQDYSPSSGEAQEVPFALS 60
MGRTRETGTEKNTSSLELEESLPEQPETGRQEEELPRFPCKKQDYSPSSGEAQEVPFALS
Sbjct: 672 MGRTRETGTEKNTSSLELEESLPEQPETGRQEEELPRFPCKKQDYSPSSGEAQEVPFALS 731
Query: 61 LSSDGAVSPVGELAAGGDRDLESQAGSLVESKARDAAEEVAPPLPMGASVPSIDSMMRKL 120
LSSDGAVSPVGELAAGGDRDLESQAGSLVESKARDAAEEVAPPLPMGASVPSIDSMMRKL
Sbjct: 732 LSSDGAVSPVGELAAGGDRDLESQAGSLVESKARDAAEEVAPPLPMGASVPSIDSMMRKL 791
Query: 121 EEMGLNLRKDQKKTKKRVSFSEQLFTEEAVAGAALLVEGHSSCPQELNPAWSVAGNASDG 180
EEMGLNLRKDQKKTKKRVSFSEQLFTEEAVAGAALLVEGHSSCPQELNPAWSVAGNASDG
Sbjct: 792 EEMGLNLRKDQKKTKKRVSFSEQLFTEEAVAGAALLVEGHSSCPQELNPAWSVAGNASDG 851
Query: 181 EPPESPHAEDSERESVTTPGPATCGAPASPADHLLLPSQEESFSEVPMSEASSAKDTPLF 240
EPPESPHAEDSERESVTTPGPATCGAPASPADHLLLPSQEESFSEVPMSEASSAKDTPLF
Sbjct: 852 EPPESPHAEDSERESVTTPGPATCGAPASPADHLLLPSQEESFSEVPMSEASSAKDTPLF 911
Query: 241 RMEGEDALVTQYQSKASDHEGLLSDPLSDLQLVSDFKSPIMADLNLSLPSIPEVASDDER 300
RMEGEDALVTQYQSKASDHEGLLSDPLSDLQLVSDFKSPIMADLNLSLPSIPEVASDDER
Sbjct: 912 RMEGEDALVTQYQSKASDHEGLLSDPLSDLQLVSDFKSPIMADLNLSLPSIPEVASDDER 971
Query: 301 IDQVEDDGDQVEDDGETAKSSTLDIGALSLGLVVPCPERGKGPSGEADRLVLGEGLCDFR 360
IDQVEDDGDQVEDDGETAKSSTLDIGALSLGLVVPCPERGKGPSGEADRLVLGEGLCDFR
Sbjct: 972 IDQVEDDGDQVEDDGETAKSSTLDIGALSLGLVVPCPERGKGPSGEADRLVLGEGLCDFR 1031
Query: 361 LQAPQASVTAPSEQTTEFGIHKPHLGKSSSLDKQLPGPSGGEEEKPMGNGSPSPPPGTSL 420
LQAPQASVTAPSEQTTEFGIHKPHLGKSSSLDKQLPGPSGGEEEKPMGNGSPSPPPGTSL
Sbjct: 1032 LQAPQASVTAPSEQTTEFGIHKPHLGKSSSLDKQLPGPSGGEEEKPMGNGSPSPPPGTSL 1091
Query: 421 DNPVPSPSPSEIFPVTHSFPSSAHSDTHHTSTAESQKKATAEGSAGRVENFGKRKPLLQA 480
DNPVPSPSPSEIFPVTHSFPSSAHSDTHHTSTAESQKKATAEGSAGRVENFGKRKPLLQA
Sbjct: 1092 DNPVPSPSPSEIFPVTHSFPSSAHSDTHHTSTAESQKKATAEGSAGRVENFGKRKPLLQA 1151
Query: 481 WVSPSETHPVSAQPGAGTGSAKHRLHPVKPMNAMATKVANCSLGTATIISENLNNEVMMK 540
WVSPSETHPVSAQPGAGTGSAKHRLHPVKPMNA ATKVANCSLGTATIISENLNNEVMMK
Sbjct: 1152 WVSPSETHPVSAQPGAGTGSAKHRLHPVKPMNATATKVANCSLGTATIISENLNNEVMMK 1211
Query: 541 KYSPSDPAFAYAQLTHDELIQLVLKQKETISKKEFQVRELEDYIDNLLVRVMEETPNILR 600
KYSPSDPAFAYAQLTHDELIQLVLKQKETISKKEFQVRELEDYIDNLLVRVMEETPNILR
Sbjct: 1212 KYSPSDPAFAYAQLTHDELIQLVLKQKETISKKEFQVRELEDYIDNLLVRVMEETPNILR 1271
Query: 601 IPTQVGKKAGKM 612
IPTQVGKKAGKM
Sbjct: 1272 IPTQVGKKAGKM 1283
Score = 29.6 bits (65), Expect = 8.5
Identities = 86/405 (21%), Positives = 144/405 (35%), Gaps = 69/405 (17%)
Query: 212 DHLLLPSQEESFSEVPMSEASSAKDTPLFRME----GEDALVTQYQSKASDHEGLLSD-P 266
+H+ L Q E+ E+ S SS+ FR + + L + ++ GL SD
Sbjct: 322 NHVYL-EQPEAKGEIKDSSPSSSPSPKGFRKKHLFSSTENLAAGSWKEPAEGGGLSSDRQ 380
Query: 267 LSDLQLVSDFKSPIMADLNLSLPSI--PEVASDDERIDQVEDDGDQVEDDGETAKSSTLD 324
LS+ KS ++LPS + S D R + + + ++ E+ K +
Sbjct: 381 LSESSTKDSLKS-------MTLPSYRPAPLVSGDLRENMAPANSEATKEAKESKKPESRR 433
Query: 325 IGALSLGLVVPCPERGKGPSGEADRLVLG---EGLC-----DFRLQAPQASVTAPSEQTT 376
LSL + + KG GE V G EG+ P + SE+ T
Sbjct: 434 SSLLSL--MTGKKDVAKGSEGENPLTVPGREKEGMLMGVKPGEDASGPAEDLVRRSEKDT 491
Query: 377 EFGIHKPHLGKSSSLDKQLPGPSGGEEEK-------------------PMGNGSPSPPPG 417
+ + + D Q+ P E K P SP P
Sbjct: 492 AAVVSRQGSSLNLFEDVQITEPEAEPESKSEPRPPISSPRAPQTRAVKPRLEVSPEAQPT 551
Query: 418 TSLDNPVPSPSPSEIFPVTHSFPSSAHSDTHHTSTAESQKKATAEGSAGRVENFGKRKPL 477
L +P SPS P + S +S S+ H + +S + + F
Sbjct: 552 ARLPSPTDSPSSLPPLP-SSSGQASVPSELGHGADTQSSESPSV---------FSSLSSP 601
Query: 478 LQAWVSPSETHPVSAQPGAGTGSAKHRLHPVKPMNAMATKVANCSLGTATIISENLNNEV 537
+ A +S S P+ + P G AK P+ P + T+ + + + +L +
Sbjct: 602 IAAPISTST--PIESWPLVDRGQAKSEGPPLLPKAELQTESLTPVPNSGSSVLGSLFKQ- 658
Query: 538 MMKKYSPSDPAFAYAQLTHDELIQLVLKQKETISKKEFQVRELED 582
P+F + T D L+ + +ET ++K ELE+
Sbjct: 659 ---------PSFPANKGTEDSLMG---RTRETGTEKNTSSLELEE 691
>gi|50363228 RAB11 family interacting protein 1 isoform 1 [Homo
sapiens]
Length = 649
Score = 221 bits (563), Expect = 2e-57
Identities = 137/248 (55%), Positives = 154/248 (62%), Gaps = 18/248 (7%)
Query: 370 APSEQTTEFGIHKPHLGKSSSLDKQLPGPS----GGEEEKPMGNGSPSPPPGTSLDNPVP 425
A SE T E K + SSL + G G E E P+ PG + +
Sbjct: 415 ANSEATKEAKESKKPESRRSSLLSLMTGKKDVAKGSEGENPL------TVPGREKEGMLM 468
Query: 426 SPSPSEIFPVTHSFPSSAHSDTHHTSTAESQKKATAEGSAGRV-ENFGKRKPLLQAWVSP 484
P E S D S ++ + +GS+ + E+ +P +
Sbjct: 469 GVKPGED-------ASGPAEDLVRRSEKDTAAVVSRQGSSLNLFEDVQITEPEAEPESKS 521
Query: 485 SETHPVSAQPGAGTGSAKHRLHPVKPMNAMATKVANCSLGTATIISENLNNEVMMKKYSP 544
P+S+ T + K RLHPVKPMNA ATKVANCSLGTATIISENLNNEVMMKKYSP
Sbjct: 522 EPRPPISSPRAPQTRAVKPRLHPVKPMNATATKVANCSLGTATIISENLNNEVMMKKYSP 581
Query: 545 SDPAFAYAQLTHDELIQLVLKQKETISKKEFQVRELEDYIDNLLVRVMEETPNILRIPTQ 604
SDPAFAYAQLTHDELIQLVLKQKETISKKEFQVRELEDYIDNLLVRVMEETPNILRIPTQ
Sbjct: 582 SDPAFAYAQLTHDELIQLVLKQKETISKKEFQVRELEDYIDNLLVRVMEETPNILRIPTQ 641
Query: 605 VGKKAGKM 612
VGKKAGKM
Sbjct: 642 VGKKAGKM 649
>gi|7662394 RAB11 family interacting protein 2 (class I) [Homo
sapiens]
Length = 512
Score = 83.6 bits (205), Expect = 5e-16
Identities = 38/69 (55%), Positives = 53/69 (76%)
Query: 543 SPSDPAFAYAQLTHDELIQLVLKQKETISKKEFQVRELEDYIDNLLVRVMEETPNILRIP 602
+P D Y LT++E++Q ++K KE + +K+ +RELEDYIDNLLVRVMEETP+ILR+P
Sbjct: 440 NPFDATAGYRSLTYEEVLQELVKHKELLRRKDTHIRELEDYIDNLLVRVMEETPSILRVP 499
Query: 603 TQVGKKAGK 611
+ +KAGK
Sbjct: 500 YEPSRKAGK 508
>gi|24308075 RAB11 family interacting protein 5 (class I) [Homo
sapiens]
Length = 653
Score = 71.6 bits (174), Expect = 2e-12
Identities = 49/161 (30%), Positives = 85/161 (52%), Gaps = 14/161 (8%)
Query: 448 HHTSTAESQKKATAEGSAGRVENFGKRKPLLQAWVSPSETHPVSAQPGAGTGSAKHRLHP 507
HH+S+ E + K++ G R +KP SP P+SA P G+ K
Sbjct: 496 HHSSSGEEKAKSSWFGL--REAKDPTQKP------SPHPVKPLSAAPVEGSPDRKQSRSS 547
Query: 508 VK-PMNAMATKVANCSLGTATIISE-----NLNNEVMMKKYSPSDPAFAYAQLTHDELIQ 561
+ +++ K+ + G+ +++ + + +K + D + Y LTHDELI
Sbjct: 548 LSIALSSGLEKLKTVTSGSIQPVTQAPQAGQMVDTKRLKDSAVLDQSAKYYHLTHDELIS 607
Query: 562 LVLKQKETISKKEFQVRELEDYIDNLLVRVMEETPNILRIP 602
L+L+++ +S+++ V+ELE YID LLVR+ME +P +L+IP
Sbjct: 608 LLLQRERELSQRDEHVQELESYIDRLLVRIMETSPTLLQIP 648
>gi|50428935 BPY2 interacting protein 1 [Homo sapiens]
Length = 1059
Score = 47.0 bits (110), Expect = 5e-05
Identities = 91/380 (23%), Positives = 143/380 (37%), Gaps = 56/380 (14%)
Query: 77 GDRDLESQAGSLVESKARDAAEE--VAPPLPMGASVPSIDSMMRKLEEMGLNLRKDQKKT 134
G RD + G L+ + R E VA P A P RK E+ R+ +K
Sbjct: 477 GSRDSSKREG-LLATHPRPGQERPGVARKEPARAEAP------RKTEKEAKTPRELKKDP 529
Query: 135 KKRVSFSEQLFTEEAVAGAALLVEGHSSCPQELNPAWSVAGNASDGEPP--ESPHAEDSE 192
K VS ++ A + L + ++ + A S + + G PP P + S
Sbjct: 530 KPSVSRTQPREVRRAASSVPNLKKTNAQAAPKPRKAPSTSHS---GFPPVANGPRSPPSL 586
Query: 193 RESVTTPGPATCGAPAS-----PADHL-LLPSQEESFSEVPMSEASSAKDTPLFRMEGED 246
R +P A CG+PAS P+ L +P+ EE E+P+ +A P R +
Sbjct: 587 RCGEASPPSAACGSPASQLVATPSLELGPIPAGEEKALELPL----AASSIPRPRTPSPE 642
Query: 247 ALVTQYQSKASDHEGLLSDPLSDLQLVSDFKSPIMADLNLSLPSIPEVASDDERIDQVED 306
+ ++S A E L PL + D SP + ++ PS+P + D
Sbjct: 643 S----HRSPAEGSERLSLSPLRGGEAGPD-ASPTVTTPTVTTPSLPAEVGSPHSTE--VD 695
Query: 307 DGDQVEDDGETAKSSTLDIGALSLGLVVPCPERGKGPSGEADRLVLGEGLCDFRLQAPQA 366
+ V + S+ LSL L P R P + D ++ + R P A
Sbjct: 696 ESLSVSFEQVLPPSAPTSEAGLSLPLRGPRARRSASPH-DVDLCLVSPCEFEHRKAVPMA 754
Query: 367 SVTAPSEQTTEFGIHKPHLGKSSSLDKQLPGPSGGEEEKPMGNGSPSPPPGTSLDNPVPS 426
A + + SS+ ++ G G EE P TS+ +P+
Sbjct: 755 PAPASPGSSND----------SSARSQERAGGLGAEETPP-----------TSVSESLPT 793
Query: 427 PSPSEIFPVTHSFPSSAHSD 446
S S+ P+ P +A SD
Sbjct: 794 LSDSDPVPLA---PGAADSD 810
>gi|66392157 RGD motif, leucine rich repeats, tropomodulin domain and
proline-rich containing [Homo sapiens]
Length = 1435
Score = 44.7 bits (104), Expect = 3e-04
Identities = 46/159 (28%), Positives = 67/159 (42%), Gaps = 15/159 (9%)
Query: 59 LSLSSDGAVSPVGELAAGGDRDLESQAGSLVESKARDAAEEVAPPLPMGASVPSIDSMMR 118
LS++ A S V + AG L + LVES A+ A + P LP A S++
Sbjct: 867 LSITGTLAESIVAQALAG----LSAARDQLVESLAQQATVTMPPALP--APDGGEPSLLE 920
Query: 119 KLEEMGLNLRKDQKKTKKRVSFSEQLFTEEAVAGAALLVEGHSSCPQELNPAWSVAGNAS 178
E GL +++++ K++ Q + E ++ LV S +E P +A
Sbjct: 921 PGELEGLFFPEEKEEEKEKDDSPPQKWPE--LSHGLHLVPFIHSAAEEAEPEPELAAPGE 978
Query: 179 DGEPPESPHAEDSERESVTTPGPATCGAPASPADHLLLP 217
D EP P A S P PA G PA P + LP
Sbjct: 979 DAEPQAGPSARGS-------PSPAAPGPPAGPLPRMDLP 1010
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 43.9 bits (102), Expect = 4e-04
Identities = 60/258 (23%), Positives = 108/258 (41%), Gaps = 21/258 (8%)
Query: 10 EKNTSSLELEESLPEQPETGRQEE----ELPRFPCKKQDYSPSSGEAQEVPFALSLSSDG 65
EK S ++ E PE+ ++ +EE E + P K++ SP ++ E L + S
Sbjct: 706 EKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPE 765
Query: 66 AVSPVGELAAGGDRDLESQAGSLVESKARDAAEEVAPPLPMGASVPSIDSMMRKLEEMGL 125
A +P E A +A S V+ + + + E+ PL A P + + K EE+
Sbjct: 766 AKTPAKEEARSPADKFPEKAKSPVKEEVK-SPEKAKSPLKEDAKAP--EKEIPKKEEVKS 822
Query: 126 NLRKDQKKTKKRVSFSEQLFTEEAVAGAALLVEGHSSCPQELNPAWSVAGNASDGEPPES 185
+++++K + +V + EE E S +E A E P+
Sbjct: 823 PVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEE----------APKKEAPK- 871
Query: 186 PHAEDSERESVTTPGPATCGAPASPA-DHLLLPSQE-ESFSEVPMSEASSAKD-TPLFRM 242
P E+ + +V P + A A D +P+ E E+ ++V + E + K+ T + +
Sbjct: 872 PKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKK 931
Query: 243 EGEDALVTQYQSKASDHE 260
E +DA + A E
Sbjct: 932 EPDDAKAKEPSKPAEKKE 949
Score = 35.4 bits (80), Expect = 0.15
Identities = 87/440 (19%), Positives = 162/440 (36%), Gaps = 41/440 (9%)
Query: 2 GRTRETGTEKNTSSLELEESLPEQPETGRQEEELPRFPCKKQDYSPSSGEAQEVPFALS- 60
G+ E G E+ E E P E E+E + P K++ SP+ ++ E A S
Sbjct: 483 GKEEEGGEEEEAEGGEEETKSPPAEEAASPEKEA-KSPVKEEAKSPAEAKSPEKEEAKSP 541
Query: 61 ---LSSDGAVSPVGELAAGGDRDLESQAGSLVESKARDAAEEVAPPLPMGASVPSIDSMM 117
S + A SP E +A S E+K+ + E +P A V S +
Sbjct: 542 AEVKSPEKAKSPAKE-----------EAKSPPEAKSPEKEEAKSP-----AEVKSPEKAK 585
Query: 118 RKLEEMGLNLRKDQKKTKKRVSFSEQLFTEEAVAGAALLVEGHSSCPQEL-NPAWSVAGN 176
+E + + + K + E+ ++ A A V+ + P E+ +P + +
Sbjct: 586 SPAKEEAKSPAEAKSPEKAKSPVKEE---AKSPAEAKSPVKEEAKSPAEVKSPEKAKSPT 642
Query: 177 ASDGEPPE---SPHAEDSER-ESVTTPGPATCGAPASPADHLLLPSQEESFSEVPMSEAS 232
+ + PE SP E+++ E +P A +P + ++ ++ P+ E
Sbjct: 643 KEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKE-- 700
Query: 233 SAKDTPLFRMEGEDALVTQYQSKASDHEGLLSDPLSDLQLVSDFKSPIMADLNLSLPSIP 292
AK + ++ + ++K+ E + + + + KSP A ++
Sbjct: 701 EAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTL- 759
Query: 293 EVASDDERIDQVEDDGDQVEDDGETAKSSTLDIGALSLGLVVPCPERGKGPSGEADRLVL 352
+V S + + E+ + E AKS + V PE+ K P E +
Sbjct: 760 DVKSPEAKTPAKEEARSPADKFPEKAKSPVKE--------EVKSPEKAKSPLKEDAKAPE 811
Query: 353 GEGLCDFRLQAPQASVTAPSEQTTEFGIHKPHLGKSSSLDKQLPGPSGGEEEKPMGNGSP 412
E +++P P E + K K+ + K +EE P +P
Sbjct: 812 KEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPK-KEAP 870
Query: 413 SPPPGTSLDNPVPSPSPSEI 432
P + V P S++
Sbjct: 871 KPKVEEKKEPAVEKPKESKV 890
>gi|5031681 embryonal Fyn-associated substrate isoform 1 [Homo
sapiens]
Length = 561
Score = 43.9 bits (102), Expect = 4e-04
Identities = 72/288 (25%), Positives = 108/288 (37%), Gaps = 46/288 (15%)
Query: 169 PAWSVAGNASDGEPPESPHAEDSERESVTTPGPA----TCGAPASPADHLLLPSQEESFS 224
P+ S A A G P +P + ++E P PA T G PA P P +
Sbjct: 74 PSLSPASPAQPGSPYPAPDHSNEDQEVYVVPPPARPCPTSGPPAGPC-----PPSPDLIY 128
Query: 225 EVPMSEASSAKDTPLFRMEGEDALVTQYQSKAS---DHEGLLSDPLSDLQLVSDFKSPIM 281
++P + + P +E D T + +S D S PL+ + + P
Sbjct: 129 KIPRASGTQLA-APRDALEVYDVPPTALRVPSSGPYDCPASFSHPLTRVAP----QPPGE 183
Query: 282 ADLNLSLPSIPEVASDDERIDQVEDDGDQVEDDGETAKSSTLDIGALSLGLVVPCPER-- 339
D +P P+ ++ E +E +G + A S L + L L PE
Sbjct: 184 DDAPYDVPLTPKPPAELE--PDLEWEGGREPGPPIYAAPSNLKRASALLNL-YEAPEELL 240
Query: 340 GKGPSGEADRLVLGEGLCDFRLQAPQA-------SVTAPSEQTTEFGI--------HKPH 384
G G D EG+ D L P+A A +Q T + H+P
Sbjct: 241 ADGEGGGTD-----EGIYDVPLLGPEAPPSPEPPGALASHDQDTLAQLLARSPPPPHRPR 295
Query: 385 LGKSSSLDKQLPGPSGGEEEKPMGNGSPSPPP---GTSLDNPVPSPSP 429
L + SL ++ P P+ E P + PSP P G+ D P+P P P
Sbjct: 296 LPSAESLSRR-PLPALPVPEAPSPSPVPSPAPGRKGSIQDRPLPPPPP 342
>gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e
[Homo sapiens]
Length = 1451
Score = 43.1 bits (100), Expect = 7e-04
Identities = 99/475 (20%), Positives = 166/475 (34%), Gaps = 59/475 (12%)
Query: 31 QEEELPRFPCKKQDYSPSSGEAQEVPFALSLSSDGAVSPVGELAAGGDRDLESQAGSLVE 90
+E +P F + S+G+A S SSD + V + +++ + S E
Sbjct: 175 EEGSVPAFGAAAKPGMVSAGQADSSSEDTSSSSDE--TDVEGKPSVKPAQVKASSVSTKE 232
Query: 91 SKARDAAE------EVAPPLPMGASVPSIDSMMRKLEEMGLNLRKDQKK-------TKKR 137
S AR AA +V P + GA P+ +K EE + + + T+ +
Sbjct: 233 SPARKAAPAPGKVGDVTPQVKGGALPPA--KRAKKPEEESESSEEGSESEEEAPAGTRSQ 290
Query: 138 VSFSEQLFTEEAVAGAALLVEGHSSCPQELNPAWSVAGNASDGEPPE-----SPHAEDSE 192
V SE++ A + A G + P A +VA G+P E S + DSE
Sbjct: 291 VKASEKILQVRAASAPAKGTPGKGATPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSE 350
Query: 193 RESVTTPG---------PATCGAPASPADHLLLPSQEESFSEVPMSEASSAKDTPLFRME 243
E+ + GA ++PA S + + P + A
Sbjct: 351 EETPAAKALLQAKASGKTSQVGAASAPAKE----SPRKGAAPAPPGKTGPAVAKAQAGKR 406
Query: 244 GEDALVTQYQSKASDHEGLLSDPLSDLQLVSDFKSPIM-ADLNLSLPSIPEVASDDERID 302
ED+ + +S + + + P V +P + + P+ P
Sbjct: 407 EEDSQSSSEESDSEEEAPAQAKPSGKAPQVRAASAPAKESPRKGAAPAPPRKTGPAAAQV 466
Query: 303 QVEDDGDQVEDDGETAKSSTLDIGALS---------LG---LVVPCPERGKGPSGEADRL 350
QV G Q ED +++ S D AL+ LG V P G GP G+
Sbjct: 467 QV---GKQEEDSRSSSEESDSDREALAAMNAAQVKPLGKSPQVKPASTMGMGPLGKGAGP 523
Query: 351 VLGEGLCDFRLQAPQASVTAPSEQTTEFGIHKPHLGKSSSLDKQLPGPSGGEEEKPMGNG 410
V + A SE ++E S S D ++P +EK +GN
Sbjct: 524 VPPGKVGPATPSAQVGKWEEDSESSSE--------ESSDSSDGEVPTAVAPAQEKSLGNI 575
Query: 411 SPSPPPGTSLDNPVPSPSPSEIFPVTHSFPSSAHSDTHHTSTAESQKKATAEGSA 465
+ P + P P + ++ S + +A+S++ A +A
Sbjct: 576 LQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSADSEEAPAAMTAA 630
>gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d
[Homo sapiens]
Length = 1488
Score = 43.1 bits (100), Expect = 7e-04
Identities = 99/475 (20%), Positives = 166/475 (34%), Gaps = 59/475 (12%)
Query: 31 QEEELPRFPCKKQDYSPSSGEAQEVPFALSLSSDGAVSPVGELAAGGDRDLESQAGSLVE 90
+E +P F + S+G+A S SSD + V + +++ + S E
Sbjct: 175 EEGSVPAFGAAAKPGMVSAGQADSSSEDTSSSSDE--TDVEGKPSVKPAQVKASSVSTKE 232
Query: 91 SKARDAAE------EVAPPLPMGASVPSIDSMMRKLEEMGLNLRKDQKK-------TKKR 137
S AR AA +V P + GA P+ +K EE + + + T+ +
Sbjct: 233 SPARKAAPAPGKVGDVTPQVKGGALPPA--KRAKKPEEESESSEEGSESEEEAPAGTRSQ 290
Query: 138 VSFSEQLFTEEAVAGAALLVEGHSSCPQELNPAWSVAGNASDGEPPE-----SPHAEDSE 192
V SE++ A + A G + P A +VA G+P E S + DSE
Sbjct: 291 VKASEKILQVRAASAPAKGTPGKGATPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSE 350
Query: 193 RESVTTPG---------PATCGAPASPADHLLLPSQEESFSEVPMSEASSAKDTPLFRME 243
E+ + GA ++PA S + + P + A
Sbjct: 351 EETPAAKALLQAKASGKTSQVGAASAPAKE----SPRKGAAPAPPGKTGPAVAKAQAGKR 406
Query: 244 GEDALVTQYQSKASDHEGLLSDPLSDLQLVSDFKSPIM-ADLNLSLPSIPEVASDDERID 302
ED+ + +S + + + P V +P + + P+ P
Sbjct: 407 EEDSQSSSEESDSEEEAPAQAKPSGKAPQVRAASAPAKESPRKGAAPAPPRKTGPAAAQV 466
Query: 303 QVEDDGDQVEDDGETAKSSTLDIGALS---------LG---LVVPCPERGKGPSGEADRL 350
QV G Q ED +++ S D AL+ LG V P G GP G+
Sbjct: 467 QV---GKQEEDSRSSSEESDSDREALAAMNAAQVKPLGKSPQVKPASTMGMGPLGKGAGP 523
Query: 351 VLGEGLCDFRLQAPQASVTAPSEQTTEFGIHKPHLGKSSSLDKQLPGPSGGEEEKPMGNG 410
V + A SE ++E S S D ++P +EK +GN
Sbjct: 524 VPPGKVGPATPSAQVGKWEEDSESSSE--------ESSDSSDGEVPTAVAPAQEKSLGNI 575
Query: 411 SPSPPPGTSLDNPVPSPSPSEIFPVTHSFPSSAHSDTHHTSTAESQKKATAEGSA 465
+ P + P P + ++ S + +A+S++ A +A
Sbjct: 576 LQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSADSEEAPAAMTAA 630
>gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a
[Homo sapiens]
Length = 1450
Score = 43.1 bits (100), Expect = 7e-04
Identities = 99/475 (20%), Positives = 166/475 (34%), Gaps = 59/475 (12%)
Query: 31 QEEELPRFPCKKQDYSPSSGEAQEVPFALSLSSDGAVSPVGELAAGGDRDLESQAGSLVE 90
+E +P F + S+G+A S SSD + V + +++ + S E
Sbjct: 175 EEGSVPAFGAAAKPGMVSAGQADSSSEDTSSSSDE--TDVEGKPSVKPAQVKASSVSTKE 232
Query: 91 SKARDAAE------EVAPPLPMGASVPSIDSMMRKLEEMGLNLRKDQKK-------TKKR 137
S AR AA +V P + GA P+ +K EE + + + T+ +
Sbjct: 233 SPARKAAPAPGKVGDVTPQVKGGALPPA--KRAKKPEEESESSEEGSESEEEAPAGTRSQ 290
Query: 138 VSFSEQLFTEEAVAGAALLVEGHSSCPQELNPAWSVAGNASDGEPPE-----SPHAEDSE 192
V SE++ A + A G + P A +VA G+P E S + DSE
Sbjct: 291 VKASEKILQVRAASAPAKGTPGKGATPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSE 350
Query: 193 RESVTTPG---------PATCGAPASPADHLLLPSQEESFSEVPMSEASSAKDTPLFRME 243
E+ + GA ++PA S + + P + A
Sbjct: 351 EETPAAKALLQAKASGKTSQVGAASAPAKE----SPRKGAAPAPPGKTGPAVAKAQAGKR 406
Query: 244 GEDALVTQYQSKASDHEGLLSDPLSDLQLVSDFKSPIM-ADLNLSLPSIPEVASDDERID 302
ED+ + +S + + + P V +P + + P+ P
Sbjct: 407 EEDSQSSSEESDSEEEAPAQAKPSGKAPQVRAASAPAKESPRKGAAPAPPRKTGPAAAQV 466
Query: 303 QVEDDGDQVEDDGETAKSSTLDIGALS---------LG---LVVPCPERGKGPSGEADRL 350
QV G Q ED +++ S D AL+ LG V P G GP G+
Sbjct: 467 QV---GKQEEDSRSSSEESDSDREALAAMNAAQVKPLGKSPQVKPASTMGMGPLGKGAGP 523
Query: 351 VLGEGLCDFRLQAPQASVTAPSEQTTEFGIHKPHLGKSSSLDKQLPGPSGGEEEKPMGNG 410
V + A SE ++E S S D ++P +EK +GN
Sbjct: 524 VPPGKVGPATPSAQVGKWEEDSESSSE--------ESSDSSDGEVPTAVAPAQEKSLGNI 575
Query: 411 SPSPPPGTSLDNPVPSPSPSEIFPVTHSFPSSAHSDTHHTSTAESQKKATAEGSA 465
+ P + P P + ++ S + +A+S++ A +A
Sbjct: 576 LQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSADSEEAPAAMTAA 630
>gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c
[Homo sapiens]
Length = 958
Score = 43.1 bits (100), Expect = 7e-04
Identities = 99/475 (20%), Positives = 166/475 (34%), Gaps = 59/475 (12%)
Query: 31 QEEELPRFPCKKQDYSPSSGEAQEVPFALSLSSDGAVSPVGELAAGGDRDLESQAGSLVE 90
+E +P F + S+G+A S SSD + V + +++ + S E
Sbjct: 175 EEGSVPAFGAAAKPGMVSAGQADSSSEDTSSSSDE--TDVEGKPSVKPAQVKASSVSTKE 232
Query: 91 SKARDAAE------EVAPPLPMGASVPSIDSMMRKLEEMGLNLRKDQKK-------TKKR 137
S AR AA +V P + GA P+ +K EE + + + T+ +
Sbjct: 233 SPARKAAPAPGKVGDVTPQVKGGALPPA--KRAKKPEEESESSEEGSESEEEAPAGTRSQ 290
Query: 138 VSFSEQLFTEEAVAGAALLVEGHSSCPQELNPAWSVAGNASDGEPPE-----SPHAEDSE 192
V SE++ A + A G + P A +VA G+P E S + DSE
Sbjct: 291 VKASEKILQVRAASAPAKGTPGKGATPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSE 350
Query: 193 RESVTTPG---------PATCGAPASPADHLLLPSQEESFSEVPMSEASSAKDTPLFRME 243
E+ + GA ++PA S + + P + A
Sbjct: 351 EETPAAKALLQAKASGKTSQVGAASAPAKE----SPRKGAAPAPPGKTGPAVAKAQAGKR 406
Query: 244 GEDALVTQYQSKASDHEGLLSDPLSDLQLVSDFKSPIM-ADLNLSLPSIPEVASDDERID 302
ED+ + +S + + + P V +P + + P+ P
Sbjct: 407 EEDSQSSSEESDSEEEAPAQAKPSGKAPQVRAASAPAKESPRKGAAPAPPRKTGPAAAQV 466
Query: 303 QVEDDGDQVEDDGETAKSSTLDIGALS---------LG---LVVPCPERGKGPSGEADRL 350
QV G Q ED +++ S D AL+ LG V P G GP G+
Sbjct: 467 QV---GKQEEDSRSSSEESDSDREALAAMNAAQVKPLGKSPQVKPASTMGMGPLGKGAGP 523
Query: 351 VLGEGLCDFRLQAPQASVTAPSEQTTEFGIHKPHLGKSSSLDKQLPGPSGGEEEKPMGNG 410
V + A SE ++E S S D ++P +EK +GN
Sbjct: 524 VPPGKVGPATPSAQVGKWEEDSESSSE--------ESSDSSDGEVPTAVAPAQEKSLGNI 575
Query: 411 SPSPPPGTSLDNPVPSPSPSEIFPVTHSFPSSAHSDTHHTSTAESQKKATAEGSA 465
+ P + P P + ++ S + +A+S++ A +A
Sbjct: 576 LQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSADSEEAPAAMTAA 630
>gi|157909822 pragmin [Homo sapiens]
Length = 1402
Score = 42.7 bits (99), Expect = 0.001
Identities = 48/202 (23%), Positives = 78/202 (38%), Gaps = 12/202 (5%)
Query: 353 GEGLCDFRLQAPQASVTAPSEQTTEFGIHKPHLGKSSSLDKQLPGPSGGEEEKPMGNGSP 412
G+GL A AS + P E+ P L KSS + + +GG P+ + S
Sbjct: 518 GQGLSSRESHAHSASESKPKERPAI----PPKLSKSSPVGSPVSPSAGGPPVSPLADLSD 573
Query: 413 SPPPGTSLDNPVPSPSPSEIFP------VTHSFPSSAHSDTHHTSTAESQKKATAEGSAG 466
G+S+ PS P++ P V S PS +S +E ++ G+
Sbjct: 574 GSSGGSSIGPQPPSQGPADPAPSCRTNGVAISDPSRCPQPA-ASSASEQRRPRFQAGTWS 632
Query: 467 RVENFGKRKPLLQAWVSPSETHPVSAQPGAGTGSAK-HRLHPVKPMNAMATKVANCSLGT 525
R + + + Q +S S P + S HRLHP + +KV +
Sbjct: 633 RQCRIEEEEEVEQELLSHSWGRETKNGPTDHSNSTTWHRLHPTDGSSGQNSKVGTGMSKS 692
Query: 526 ATIISENLNNEVMMKKYSPSDP 547
A+ E + ++ +SP P
Sbjct: 693 ASFAFEFPKDRSGIETFSPPPP 714
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 42.4 bits (98), Expect = 0.001
Identities = 42/136 (30%), Positives = 56/136 (41%), Gaps = 6/136 (4%)
Query: 360 RLQAPQASVTAPSEQTTEFGIHKP--HLGKSSSLDKQLPGPSGGEEEKPMGNGSPSPPPG 417
++ A QA S Q T G KP L + Q PGP+ ++P PS PG
Sbjct: 448 KIPAQQAGPGKTSAQQT--GPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPG 505
Query: 418 TSLDNPV-PSPS-PSEIFPVTHSFPSSAHSDTHHTSTAESQKKATAEGSAGRVENFGKRK 475
++ P P P+ PS P + PS ++ S K +A+ S V G K
Sbjct: 506 STKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGK 565
Query: 476 PLLQAWVSPSETHPVS 491
PL VSPS P S
Sbjct: 566 PLQPPTVSPSAKQPPS 581
Score = 31.2 bits (69), Expect = 2.9
Identities = 110/522 (21%), Positives = 176/522 (33%), Gaps = 74/522 (14%)
Query: 2 GRTRETGTEKN--TSSLELEESLP-EQPETGRQEEELPRFPCKKQDYSPSSGEAQEVPFA 58
GR + G K+ T + E+ LP P T +E R K++ S + F
Sbjct: 103 GRPAQPGLSKSRTTDTFRSEQKLPGRSPSTISLKESKSRTDLKEEHKS-----SMMPGFL 157
Query: 59 LSLSSDGAVSPVGELAAGGDRDLESQAGSLVESKARDAAEEVAPPLPMGASVPSIDSMMR 118
+++ AVS V D +S+A S E+ + + P G P +
Sbjct: 158 SEVNALSAVSSVVNKFNPFDLISDSEA-SQEETTKKQKVVQKEQGKPEGIIKPPLQQQPP 216
Query: 119 KLEEMGLNLRKD---QKKTKKRVSFSEQLFTEEAVAGAALLVEGHSSCPQELNPAWSVAG 175
K +D Q T K +S + + G ++G + PQ + +
Sbjct: 217 KPIPKQQGPGRDPLQQDGTPKSISSQQPEKIKSQPPGTGKPIQGPTQTPQTDHAKLPLQR 276
Query: 176 NASDGEPPESPHAEDSERESVTTPGPATCGAPASPADHLLLPSQEESFSEVPMSEASSAK 235
+AS P++ A+ ESV P+ P+ P P Q+ + + P + K
Sbjct: 277 DASR---PQTKQADIVRGESVKPSLPS----PSKP------PIQQPTPGKPPAQQPGHEK 323
Query: 236 DTPLFRMEGEDALVTQYQSKASDHEGLLSDPLSDLQLVSDFKSPIMADLNLSLPSIPEVA 295
P +K L+ PL+ Q K P+ P+ P +
Sbjct: 324 SQP-------------GPAKPPAQPSGLTKPLA--QQPGTVKPPVQPPGTTKPPAQP-LG 367
Query: 296 SDDERIDQVEDDGDQVEDDGETAKSSTLDIGALSLGLVVPCPERGKGPSGEADRLVLGEG 355
Q + E G A + +G P + GP+ + V G
Sbjct: 368 PAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKT--------PAQQPGPAKPPTQQV---G 416
Query: 356 LCDFRLQAPQASVTAPSEQTTEFGIHKPHLGKSSSLDKQLPGPSGGEEEKPMGNGSPSPP 415
Q P A + T+ + +P GK + Q GP ++ PS
Sbjct: 417 TPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGK---IPAQQAGPGKTSAQQTGPTKPPSQL 473
Query: 416 PGTSLDNPVPSPSPSEIFPVTHSFPSSAHSDTHHTSTAESQKKATAEGSAGRVENFGKRK 475
PG + P P P++ P P SA + + + + G K
Sbjct: 474 PGPAKPPP-QQPGPAKPPPQQ---PGSAKPPSQQPGSTKPPPQQP-----------GPAK 518
Query: 476 PLLQAWVSPSETHPVSAQPGAGTGSAKHRLHPVKPMNAMATK 517
P Q P T P S QPG+ SA+ + P KP +TK
Sbjct: 519 PSPQ---QPGSTKPPSQQPGSAKPSAQ-QPSPAKPSAQQSTK 556
Score = 31.2 bits (69), Expect = 2.9
Identities = 33/123 (26%), Positives = 48/123 (39%), Gaps = 27/123 (21%)
Query: 403 EEKPMGNGSPSPP-----PGTSLDNPVPSPSPSE--------IFPVTHSFPSSAHSDTHH 449
+ KPM GSP+PP G ++ P SP P E + +T + P S +
Sbjct: 867 DAKPMPKGSPTPPGPRPTAGQTVPTPQQSPKPQEQSRRFSLNLGSITDA-PKSQPTTPQE 925
Query: 450 TST-----------AESQKKATAEGSAGRVENFGKRKPLLQAWVSPSETHPVSAQPGAGT 498
T T +++ + G G G P+ QA +PS+ P S P T
Sbjct: 926 TVTGKLFGFGASIFSQASNLISTAGQPGPHSQSGPGAPMKQA-PAPSQP-PTSQGPPKST 983
Query: 499 GSA 501
G A
Sbjct: 984 GQA 986
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 42.4 bits (98), Expect = 0.001
Identities = 42/136 (30%), Positives = 56/136 (41%), Gaps = 6/136 (4%)
Query: 360 RLQAPQASVTAPSEQTTEFGIHKP--HLGKSSSLDKQLPGPSGGEEEKPMGNGSPSPPPG 417
++ A QA S Q T G KP L + Q PGP+ ++P PS PG
Sbjct: 448 KIPAQQAGPGKTSAQQT--GPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPG 505
Query: 418 TSLDNPV-PSPS-PSEIFPVTHSFPSSAHSDTHHTSTAESQKKATAEGSAGRVENFGKRK 475
++ P P P+ PS P + PS ++ S K +A+ S V G K
Sbjct: 506 STKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGK 565
Query: 476 PLLQAWVSPSETHPVS 491
PL VSPS P S
Sbjct: 566 PLQPPTVSPSAKQPPS 581
Score = 31.2 bits (69), Expect = 2.9
Identities = 110/522 (21%), Positives = 176/522 (33%), Gaps = 74/522 (14%)
Query: 2 GRTRETGTEKN--TSSLELEESLP-EQPETGRQEEELPRFPCKKQDYSPSSGEAQEVPFA 58
GR + G K+ T + E+ LP P T +E R K++ S + F
Sbjct: 103 GRPAQPGLSKSRTTDTFRSEQKLPGRSPSTISLKESKSRTDLKEEHKS-----SMMPGFL 157
Query: 59 LSLSSDGAVSPVGELAAGGDRDLESQAGSLVESKARDAAEEVAPPLPMGASVPSIDSMMR 118
+++ AVS V D +S+A S E+ + + P G P +
Sbjct: 158 SEVNALSAVSSVVNKFNPFDLISDSEA-SQEETTKKQKVVQKEQGKPEGIIKPPLQQQPP 216
Query: 119 KLEEMGLNLRKD---QKKTKKRVSFSEQLFTEEAVAGAALLVEGHSSCPQELNPAWSVAG 175
K +D Q T K +S + + G ++G + PQ + +
Sbjct: 217 KPIPKQQGPGRDPLQQDGTPKSISSQQPEKIKSQPPGTGKPIQGPTQTPQTDHAKLPLQR 276
Query: 176 NASDGEPPESPHAEDSERESVTTPGPATCGAPASPADHLLLPSQEESFSEVPMSEASSAK 235
+AS P++ A+ ESV P+ P+ P P Q+ + + P + K
Sbjct: 277 DASR---PQTKQADIVRGESVKPSLPS----PSKP------PIQQPTPGKPPAQQPGHEK 323
Query: 236 DTPLFRMEGEDALVTQYQSKASDHEGLLSDPLSDLQLVSDFKSPIMADLNLSLPSIPEVA 295
P +K L+ PL+ Q K P+ P+ P +
Sbjct: 324 SQP-------------GPAKPPAQPSGLTKPLA--QQPGTVKPPVQPPGTTKPPAQP-LG 367
Query: 296 SDDERIDQVEDDGDQVEDDGETAKSSTLDIGALSLGLVVPCPERGKGPSGEADRLVLGEG 355
Q + E G A + +G P + GP+ + V G
Sbjct: 368 PAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKT--------PAQQPGPAKPPTQQV---G 416
Query: 356 LCDFRLQAPQASVTAPSEQTTEFGIHKPHLGKSSSLDKQLPGPSGGEEEKPMGNGSPSPP 415
Q P A + T+ + +P GK + Q GP ++ PS
Sbjct: 417 TPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGK---IPAQQAGPGKTSAQQTGPTKPPSQL 473
Query: 416 PGTSLDNPVPSPSPSEIFPVTHSFPSSAHSDTHHTSTAESQKKATAEGSAGRVENFGKRK 475
PG + P P P++ P P SA + + + + G K
Sbjct: 474 PGPAKPPP-QQPGPAKPPPQQ---PGSAKPPSQQPGSTKPPPQQP-----------GPAK 518
Query: 476 PLLQAWVSPSETHPVSAQPGAGTGSAKHRLHPVKPMNAMATK 517
P Q P T P S QPG+ SA+ + P KP +TK
Sbjct: 519 PSPQ---QPGSTKPPSQQPGSAKPSAQ-QPSPAKPSAQQSTK 556
Score = 31.2 bits (69), Expect = 2.9
Identities = 33/123 (26%), Positives = 48/123 (39%), Gaps = 27/123 (21%)
Query: 403 EEKPMGNGSPSPP-----PGTSLDNPVPSPSPSE--------IFPVTHSFPSSAHSDTHH 449
+ KPM GSP+PP G ++ P SP P E + +T + P S +
Sbjct: 867 DAKPMPKGSPTPPGPRPTAGQTVPTPQQSPKPQEQSRRFSLNLGSITDA-PKSQPTTPQE 925
Query: 450 TST-----------AESQKKATAEGSAGRVENFGKRKPLLQAWVSPSETHPVSAQPGAGT 498
T T +++ + G G G P+ QA +PS+ P S P T
Sbjct: 926 TVTGKLFGFGASIFSQASNLISTAGQPGPHSQSGPGAPMKQA-PAPSQP-PTSQGPPKST 983
Query: 499 GSA 501
G A
Sbjct: 984 GQA 986
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 41.6 bits (96), Expect = 0.002
Identities = 68/268 (25%), Positives = 98/268 (36%), Gaps = 42/268 (15%)
Query: 21 SLPEQPETGRQEEELPRFPCKKQDYSPSSGEAQEVPFALS----LSSDGAVSPVGEL--- 73
S P +P EELP P + SP +P LS ++ A+SP+GEL
Sbjct: 901 SEPGEPPLSPLPEELPLSPSGEPSLSPQLMPPDPLPPPLSPIITAAAPPALSPLGELEYP 960
Query: 74 -AAGGDRDLESQ-AGSLVESKARDAAEEVA---PPLPMGASVPSIDSMMRKLEEMGLNLR 128
A GD D ES A ++E+ E P+P PS S + + +
Sbjct: 961 FGAKGDSDPESPLAAPILETPISPPPEANCTDPEPVPPMILPPSPGSPVGPASPILMEPL 1020
Query: 129 KDQKKTKKRVSFSEQLFTEEAVAGAALLVEGHSSCPQELNPAWSVAGNASDGE------- 181
Q + S Q + AL + S P L+P V G + + E
Sbjct: 1021 PPQCSPLLQHSLVPQNSPPSQCSPPALPL----SVPSPLSPIGKVVGVSDEAELHEMETE 1076
Query: 182 ---PPESPHAEDSERESVTTP-GPATCGAPA---------------SPADHLLLPSQEES 222
PE P E S + +P G +C AP+ +P D + P +
Sbjct: 1077 KVSEPECPALEPSATSPLPSPMGDLSCPAPSPAPALDDFSGLGEDTAPLDGIDAPGSQPE 1136
Query: 223 FSEVPMSEASSAKDTPLFRMEGEDALVT 250
+ P S AS K +P+ E A VT
Sbjct: 1137 PGQTPGSLASELKGSPVLLDPEELAPVT 1164
Score = 33.9 bits (76), Expect = 0.45
Identities = 59/271 (21%), Positives = 89/271 (32%), Gaps = 25/271 (9%)
Query: 182 PPESPHAEDSERESVTTPGPATCGAPASPADHLLLPSQEESFSEVPMSEASSA--KDTPL 239
P ESP + E ++ P +P A HL P +E S P S + +P
Sbjct: 453 PEESPTSPPPEASRLSPPPEELPASPLPEALHLSRPLEESPLSPPPEESPLSPPPESSPF 512
Query: 240 FRMEGEDALVTQYQSKASDHEGLLSDPLSDLQLVSDFKSPIMADLNLSLPSIPEVASDDE 299
+E + + E LS P L F+ ++ LP+ P +
Sbjct: 513 SPLEESPLSPPEESPPSPALETPLSPPPEASPLSPPFEESPLSPPPEELPTSPP--PEAS 570
Query: 300 RIDQVEDDGDQVEDDGETAKSSTLDIGAL-----SLGLVVPCPERGKGPSGEADRLVLGE 354
R+ ++ E+ S + L L P E P EA RL
Sbjct: 571 RLSPPPEESPMSPPPEESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPEASRLS--- 627
Query: 355 GLCDFRLQAPQASVTAPSEQTTEFGIHKPHLGKSSSL---DKQLPGPSGGEEEKPMGNGS 411
P+ S +P + + P + + S L + P P P
Sbjct: 628 -------PPPEDSPMSPPPEESPMS-PPPEVSRLSPLPVVSRLSPPPEESPLSPPPEESP 679
Query: 412 PSPPPGTSLDNPVPSPSPSEIFPVTHSFPSS 442
SPPP S +P P SP+ P P+S
Sbjct: 680 TSPPPEASRLSPPPEDSPTS--PPPEDSPAS 708
Score = 32.3 bits (72), Expect = 1.3
Identities = 46/186 (24%), Positives = 61/186 (32%), Gaps = 16/186 (8%)
Query: 337 PERGKGPSGEADRLVLGEGLCDFRLQAPQASVTAPSEQTTEFGIHKPHLGKSS-SLDKQL 395
PE G P+ E D L + C + + + P E KP LGK+ L+ QL
Sbjct: 375 PEPGDTPTDEPDALYVA---CQGQPKGGHVTSMQPKEPGPLQCEAKP-LGKAGVQLEPQL 430
Query: 396 PGPSGGE-------EEKPMG----NGSPSPPPGTSLDNPVPSPSPSEIFPVTHSFPSSAH 444
P E EE P+ SPPP S +P P P+ P
Sbjct: 431 EAPLNEEMPLLPPPEESPLSPPPEESPTSPPPEASRLSPPPEELPASPLPEALHLSRPLE 490
Query: 445 SDTHHTSTAESQKKATAEGSAGRVENFGKRKPLLQAWVSPSETHPVSAQPGAGTGSAKHR 504
ES E S P ++ SP+ P+S P A S
Sbjct: 491 ESPLSPPPEESPLSPPPESSPFSPLEESPLSPPEESPPSPALETPLSPPPEASPLSPPFE 550
Query: 505 LHPVKP 510
P+ P
Sbjct: 551 ESPLSP 556
Score = 31.6 bits (70), Expect = 2.2
Identities = 26/78 (33%), Positives = 33/78 (42%), Gaps = 10/78 (12%)
Query: 394 QLPGPSGGEEEKP-MGNGSPSPPPGTSLDNPVPS--PSPSEIFPVTHSFPSSAHSDTHHT 450
+LP P G P +G P+PPP + + PS PSPS P P + H
Sbjct: 4288 RLPAPPGALSTGPVLGPVHPTPPPSSPQEPKRPSQLPSPSSQLPTEAQLPPT------HP 4341
Query: 451 STAESQKKATAEGSAGRV 468
T + Q T E GRV
Sbjct: 4342 GTPKPQ-GPTLEPPPGRV 4358
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 40.4 bits (93), Expect = 0.005
Identities = 65/289 (22%), Positives = 109/289 (37%), Gaps = 34/289 (11%)
Query: 158 EGHSSCPQELNPAWSVAGNASDGEPPESPHAEDSERESVTTPGPATCGAPASPADHLLLP 217
E SS +E P + + +PP + A +S +S + AP+ PA
Sbjct: 328 ESDSSSEEEKKPPTKAVVSKATTKPPPAKKAAESSSDSSDSDSSEDDEAPSKPAGTTKNS 387
Query: 218 SQEESF-SEVPMSEASSAKDTPLFRMEGEDALVTQYQSKASDHEGLLSDPLSDLQLVSDF 276
S + + ++ P + ++A P+ G+ L + S +S+ E S+ ++V+
Sbjct: 388 SNKPAVTTKSPAVKPAAAPKQPV--GGGQKLLTRKADSSSSEEESSSSEEEKTKKMVATT 445
Query: 277 KSPIMADLNLSLPSIPEVASDDERIDQVEDDGDQVEDDGE-TAKSSTLDIGALSLGLVVP 335
K A LSLP+ + A R + D E++ E T+KS+ G P
Sbjct: 446 KPKATAKAALSLPA--KQAPQGSRDSSSDSDSSSSEEEEEKTSKSAVKKKPQKVAGGAAP 503
Query: 336 ----CPERGKGPSG----------EADRLVLGEGLCDFRLQAPQASVTA----------- 370
++GK S E + + G+G R QAP+A+ T+
Sbjct: 504 SKPASAKKGKAESSNSSSSDDSSEEEEEKLKGKG--SPRPQAPKANGTSALTAQNGKAAK 561
Query: 371 -PSEQTTEFGIHKPHLGKSSSLDKQLPGPSGGEEEKPMGNGSPSPPPGT 418
E+ E + KS SL K+ + E E P P T
Sbjct: 562 NSEEEEEEKKKAAVVVSKSGSLKKRKQNEAAKEAETPQAKKIKLQTPNT 610
Score = 30.8 bits (68), Expect = 3.8
Identities = 38/148 (25%), Positives = 59/148 (39%), Gaps = 44/148 (29%)
Query: 362 QAPQASVTAPSEQTTEFGIHKPHLGKSSSLDKQLPGPSGGEEEKPMGNGS---------P 412
+AP + T P+ +++ + SS D++ E++KPM N
Sbjct: 251 KAPVKAATTPTRKSSS--------SEDSSSDEE------EEQKKPMKNKPGPYSSVPPPS 296
Query: 413 SPPPGTSLDNPVPSPSPSEIFPVTHSFPSSAHSDTHHTSTAESQKKATAEGSAGRVENFG 472
+PPP SL P + + PV S SS SD S++E +K
Sbjct: 297 APPPKKSLGTQPPKKAVEKQQPVESSEDSSDESD----SSSEEEK--------------- 337
Query: 473 KRKPLLQAWVSPSETHPVSAQPGAGTGS 500
KP +A VS + T P A+ A + S
Sbjct: 338 --KPPTKAVVSKATTKPPPAKKAAESSS 363
>gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax
homolog 2 [Homo sapiens]
Length = 1210
Score = 40.0 bits (92), Expect = 0.006
Identities = 108/511 (21%), Positives = 176/511 (34%), Gaps = 71/511 (13%)
Query: 9 TEKNTSSLELEESLPEQPETGRQEEELPRFPCKKQDYSPSSGEAQEVPFALSLSSDGAVS 68
+E + S +S E + +E E P + + P + ++ L+ S A
Sbjct: 471 SESTSDSDSSSDSESESSSSDSEENEPLETPAPEPE--PPTTNKWQLDNWLTKVSQPAAP 528
Query: 69 PVGELAAGGDRDLESQAGSLVESKARDAAEEVAPPLPMGASVPSIDSMM-----RKLEEM 123
P G + R GS + +++ +E PP + P R ++
Sbjct: 529 PEGPRSTEPPRRHPESKGSSDSATSQEHSESKDPPPKSSSKAPRAPPEAPHPGKRSCQKS 588
Query: 124 GLNLRKDQKKT------KKRVSFSEQLFTEEAVAGA---ALLVEGHSSCPQELNPAWSVA 174
Q++T KK V S + + ++ G LL G + P
Sbjct: 589 PAQQEPPQRQTVGTKQPKKPVKASARAGSRTSLQGEREPGLLPYGSRDQTSKDKPKVKTK 648
Query: 175 GN---ASDGEP-PESPHAEDSERESVTTPGPATCGAPASPADHLLLPSQEESFSEVPMSE 230
G A+ EP P P + + ++ + P P+ + PA + E F+ VP++E
Sbjct: 649 GRPRAAASNEPKPAVPPSSEKKKHKSSLPAPSKALSGPEPAKDNVEDRTPEHFALVPLTE 708
Query: 231 ASSAKDTPL-FRMEG-EDALVTQYQSKASDHEGLLSDPLSDLQLVSDFK-----SPIMAD 283
+ + R G A+V Q S+ + L PL D +L+S + +M
Sbjct: 709 SQGPPHSGSGSRTSGCRQAVVVQEDSR----KDRLPLPLRDTKLLSPLRDTPPPQSLMVK 764
Query: 284 LNLSLPS-IPEVASDDERIDQVEDDGDQVEDDGETAKSSTLDIGALSLGLVVPCPERGKG 342
+ L L S IP+ R + ED + K S+ L+ K
Sbjct: 765 ITLDLLSRIPQPPGKGSRQRKAEDKQPPAGKKHSSEKRSSDSSSKLA-----------KK 813
Query: 343 PSGEADRLVLGEGLCD---FRLQAPQASVTAPSEQT-TEFGIHKPHLGKSSSLDKQL--P 396
GEA+R CD RL+ S ++ S + E KP S S K++ P
Sbjct: 814 RKGEAER------DCDNKKIRLEKEIKSQSSSSSSSHKESSKTKPSRPSSQSSKKEMLPP 867
Query: 397 GPSGGEEEKPMGNGSPSPPPGTSLDNPVPSPSPSEIFPVTHSFPSSAHS--DTHHTSTAE 454
P +KP P S E P SA S H S+
Sbjct: 868 PPVSSSSQKPA--------------KPALKRSRREADTCGQDPPKSASSTKSNHKDSSIP 913
Query: 455 SQKKATAEGSAGRVENFGKRKPLLQAWVSPS 485
Q++ +GS E+ G + PS
Sbjct: 914 KQRRVEGKGSRSSSEHKGSSGDTANPFPVPS 944
>gi|38373671 SEC24-related protein C [Homo sapiens]
Length = 1094
Score = 40.0 bits (92), Expect = 0.006
Identities = 47/206 (22%), Positives = 69/206 (33%), Gaps = 5/206 (2%)
Query: 2 GRTRETGTEKNTSSLELEESLPEQPETGRQEEELPRFPCKKQDYSPSSGEAQEVPFALSL 61
G+ + + SS + LP G + P Q Y P AQ +
Sbjct: 84 GQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLAPVGNQPPVLQPYGPPPTSAQVATQLSGM 143
Query: 62 SSDGAVSPV---GELAAGGDRDLESQAGSLVESKARDAAEE-VAPPLPMGASVPSIDSMM 117
GAV+P L G L S +GS S + + APPL P I +
Sbjct: 144 QISGAVAPAPPSSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQ 203
Query: 118 RKLEEMGLNLRKDQKKTKKRVSFSEQLFTEEAVAGAALLVEGH-SSCPQELNPAWSVAGN 176
R + + S + L ++ G ++ H SS PQ L P + G
Sbjct: 204 RSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQALPPGTQMTGP 263
Query: 177 ASDGEPPESPHAEDSERESVTTPGPA 202
P SP + + + GPA
Sbjct: 264 LGPLPPMHSPQQPGYQPQQNGSFGPA 289
>gi|38373669 SEC24-related protein C [Homo sapiens]
Length = 1094
Score = 40.0 bits (92), Expect = 0.006
Identities = 47/206 (22%), Positives = 69/206 (33%), Gaps = 5/206 (2%)
Query: 2 GRTRETGTEKNTSSLELEESLPEQPETGRQEEELPRFPCKKQDYSPSSGEAQEVPFALSL 61
G+ + + SS + LP G + P Q Y P AQ +
Sbjct: 84 GQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLAPVGNQPPVLQPYGPPPTSAQVATQLSGM 143
Query: 62 SSDGAVSPV---GELAAGGDRDLESQAGSLVESKARDAAEE-VAPPLPMGASVPSIDSMM 117
GAV+P L G L S +GS S + + APPL P I +
Sbjct: 144 QISGAVAPAPPSSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQ 203
Query: 118 RKLEEMGLNLRKDQKKTKKRVSFSEQLFTEEAVAGAALLVEGH-SSCPQELNPAWSVAGN 176
R + + S + L ++ G ++ H SS PQ L P + G
Sbjct: 204 RSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQALPPGTQMTGP 263
Query: 177 ASDGEPPESPHAEDSERESVTTPGPA 202
P SP + + + GPA
Sbjct: 264 LGPLPPMHSPQQPGYQPQQNGSFGPA 289
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 39.7 bits (91), Expect = 0.008
Identities = 78/392 (19%), Positives = 133/392 (33%), Gaps = 52/392 (13%)
Query: 146 TEEAVAGAALLVEGHSSCPQE-LNPAWSVAGNASDGEPPESPHAEDSERESVTT------ 198
T + A++ V + P L+PA S P ++D+ TT
Sbjct: 740 TASGLLEASMPVHSSTRSPHTTLSPAGSTTRQGESTTFHSWPSSKDTRPAPPTTTSAFVE 799
Query: 199 PGPATCGAPAS-PADHLLLPSQEESFSEVPMSEASSAKDTPLFRMEGEDALVTQYQSKAS 257
P + G+P+S P H+ S E + SS T D + + +
Sbjct: 800 PSTTSHGSPSSIPTTHISARSTTSGLVEESTTYHSSPGSTQTMHFPESDTTSGRGEESTT 859
Query: 258 DHEG----LLSDPLSDLQLVSDFKSPIMADLNLSLPSIPEVASDDERIDQVEDDGDQVED 313
H + S P + LV + S + + + P+ ++ R ++
Sbjct: 860 SHSSTTHTISSAPSTTSALVEEPTSYHSSPGSTATTHFPDSSTTSGRSEE---------- 909
Query: 314 DGETAKSSTLDIGALSLGLVVPCPERGKGPSGEADRLVLGEGLCDFRLQAPQASVTAP-- 371
TA S+ D +V+P GE+ + G A S T P
Sbjct: 910 --STASHSSQDATGT---IVLPARSTTSVLLGESTTSPISSG--SMETTALPGSTTTPGL 962
Query: 372 SEQTTEFGIHKPHLGKSSSLDKQLPGPSGGEEEKPMGNGSPSPPPGTSLDNPVPSPSPSE 431
SE++T F H +++L SG EE P T+ + +P S
Sbjct: 963 SERSTTF--HSSPRSPATTLSPASTTSSGVSEESTTSRSRPGSTHTTAFPDSTTTPGLSR 1020
Query: 432 IFPVTHSFPSSAHS---DTHHTSTAESQKKATAEGSAGRVE-----------NFGKRKPL 477
+HS P S + T++ SQ+ T+ S+G + +FG+
Sbjct: 1021 HSTTSHSSPGSTDTTLLPASTTTSGPSQESTTSHSSSGSTDTALSPGSTTALSFGQESTT 1080
Query: 478 LQAWVSPSETHPV---SAQPGAGTGSAKHRLH 506
+ +P TH + +G A R+H
Sbjct: 1081 FHS--NPGSTHTTLFPDSTTSSGIVEASTRVH 1110
Score = 38.9 bits (89), Expect = 0.014
Identities = 74/355 (20%), Positives = 125/355 (35%), Gaps = 56/355 (15%)
Query: 174 AGNASDGEPPESPHAEDSERESVTTPGPA---TCGAPASPADHLLLPSQEESFSEVPMSE 230
A + + G ES S + TTP PA T G + P ++ P S+
Sbjct: 3430 ASSTTLGRSEESTTVHSSPVATATTPSPARSTTSGLVEESTTYHSSPGSTQTM-HFPESD 3488
Query: 231 ASSAKDTPLFRMEGEDALVTQYQSKASDHEGLLSDPLSDLQLVSDFKSPIMADLNLSLPS 290
+S + GE++ S +S + S P + LV + S + + +
Sbjct: 3489 TTSGR--------GEESTT----SHSSTTHTISSAPSTTSALVEEPTSYHSSPGSTATTH 3536
Query: 291 IPEVASDDERIDQVEDDGDQVEDDGETAKSSTLDIGALSLGLVVPCPERGKGPSGEADRL 350
P+ ++ R ++ TA S+ D +V+P GE+
Sbjct: 3537 FPDSSTTSGRSEE------------STASHSSQDATGT---IVLPARSTTSVLLGESTTS 3581
Query: 351 VLGEGLCDFRLQAPQASVTAP--SEQTTEFGIHKPHLGKSSSLDKQLPGPSGGEEEKPMG 408
+ G A S T P SE++T F H +++L SG EE
Sbjct: 3582 PISSG--SMETTALPGSTTTPGLSEKSTTF--HSSPRSPATTLSPASTTSSGVSEESTTS 3637
Query: 409 NGSPSPPPGTSLDNPVPSPSPSEIFPVTHSFPSSAHS---DTHHTSTAESQKKATAEGSA 465
+ P T+ + +P S +HS P S + T++ SQ+ T+ S+
Sbjct: 3638 HSRPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTSGSSQESTTSHSSS 3697
Query: 466 GRVE-----------NFGKRKPLLQAWVSPSETHPV---SAQPGAGTGSAKHRLH 506
G + +FG+ + SP TH + +G A R+H
Sbjct: 3698 GSTDTALSPGSTTALSFGQESTTFHS--SPGSTHTTLFPDSTTSSGIVEASTRVH 3750
Score = 36.6 bits (83), Expect = 0.069
Identities = 72/352 (20%), Positives = 120/352 (34%), Gaps = 50/352 (14%)
Query: 174 AGNASDGEPPESPHAEDSERESVTTPGPATCGAPASPADHLLLPSQEESFSEVPMSEASS 233
A + + G ES S + TTP PA + S S + E+S+
Sbjct: 1873 ASSTTLGRSEESTTVHSSPVATATTPSPARSTTSGLVEESTAYHSSPGSTQTMHFPESST 1932
Query: 234 AKDTPLFRMEGEDALVTQYQSKASDHEGLLSDPLSDLQLVSDFKSPIMADLNLSLPSIPE 293
A E++ S +S + S P + LV + S + + + P+
Sbjct: 1933 ASG------RSEESRT----SHSSTTHTISSPPSTTSALVEEPTSYHSSPGSTATTHFPD 1982
Query: 294 VASDDERIDQVEDDGDQVEDDGETAKSSTLDIGALSLGLVVPCPERGKGPSGEADRLVLG 353
++ R ++ TA S+ D +V+P GE+ +
Sbjct: 1983 SSTTSGRSEE------------STASHSSQDATGT---IVLPARSTTSVLLGESTTSPIS 2027
Query: 354 EGLCDFRLQAPQASVTAP--SEQTTEFGIHKPHLGKSSSLDKQLPGPSGGEEEKPMGNGS 411
G A S T P SE++T F H +++L SG EE +
Sbjct: 2028 SG--SMETTALPGSTTTPGLSEKSTTF--HSSPRSPATTLSPASTTSSGVSEESTTSHSR 2083
Query: 412 PSPPPGTSLDNPVPSPSPSEIFPVTHSFPSSAHS---DTHHTSTAESQKKATAEGSAGRV 468
P T+ + +P S +HS P S + T++ SQ+ T+ S G
Sbjct: 2084 PGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTSGPSQESTTSHSSPGST 2143
Query: 469 E-----------NFGKRKPLLQAWVSPSETHPV---SAQPGAGTGSAKHRLH 506
+ +FG+ + SP TH + +G A R+H
Sbjct: 2144 DTALSPGSTTALSFGQESTTFHS--SPGSTHTTLFPDSTTSSGIVEASTRVH 2193
Score = 34.3 bits (77), Expect = 0.34
Identities = 70/337 (20%), Positives = 117/337 (34%), Gaps = 44/337 (13%)
Query: 192 ERESVTTPGPATCGAPASPADHLLLPSQEES---FSEVPMS-EASSAKDTPLFRMEGEDA 247
E + + P + + SPA EES +S P S E + TP + GE+
Sbjct: 2353 EESTTSRSQPGSTHSTVSPASTTTPGLSEESTTVYSSSPGSTETTVFPRTPTTSVRGEEP 2412
Query: 248 LVTQYQSKASDHEGLLSDPLSDLQLVSDFKSPIMADLNLSLPSIPEVASDDERIDQVEDD 307
T + AS H L ++ D + + + + + P P AS +
Sbjct: 2413 -TTFHSRPASTHTTLFTE---------DSTTSGLTEESTAFPGSP--ASTQTGLPATLTT 2460
Query: 308 GDQVEDDGETAKSSTLDIGALSLGLVV-PCPERGKGPSGEADRLVLGEGLCDFRLQAPQA 366
D E+ S+T + S G + P G GE+ L +
Sbjct: 2461 ADLGEE------STTFPSSSGSTGTTLSPARSTTSGLVGESTPSRLSPSSTETTTLPGSP 2514
Query: 367 SVTAPSEQTTEFGIHKPHLGKSSSLDKQLPGPSGGEEEKPMGNGSPSPPPGTSLDNPVPS 426
+ + SE++T F + ++L SG EE + P T+ + +
Sbjct: 2515 TTPSLSEKSTTF--YTSPRSPDATLSPATTTSSGVSEESSTSHSQPGSTHTTAFPDSTTT 2572
Query: 427 PSPSEIFPVTHSFPSSAHS---DTHHTSTAESQKKATAEGSAGRVE-----------NFG 472
P S +HS P S + T++ SQ+ T+ S G + +FG
Sbjct: 2573 PGLSRHSTTSHSSPGSTDTTLLPASTTTSGPSQESTTSHSSPGSTDTALSPGSTTALSFG 2632
Query: 473 KRKPLLQAWVSPSETHPV---SAQPGAGTGSAKHRLH 506
+ + SP TH + +G A R+H
Sbjct: 2633 QESTTFHS--SPGSTHTTLFPDSTTSSGIVEASTRVH 2667
Score = 30.4 bits (67), Expect = 5.0
Identities = 34/110 (30%), Positives = 42/110 (38%), Gaps = 11/110 (10%)
Query: 370 APSEQTTE--FGIHKP-HLGKSSSLDKQLPG----PSGGEEEKPMGNGSPSPPPGTSLDN 422
+P+ TT G P L SS+ LPG PS E+ SP P T
Sbjct: 1399 SPARSTTSGLVGESTPSRLSPSSTETTTLPGSPTTPSLSEKSTTFYT-SPRSPDATLSPA 1457
Query: 423 PVPSPSPSEIFPVTHSFPSSAHSDTHHTSTAE---SQKKATAEGSAGRVE 469
S SE +HS P S H+ ST SQ+ T+ S G E
Sbjct: 1458 TTTSSGVSEESSTSHSQPGSTHTTAFPDSTTTSDLSQEPTTSHSSQGSTE 1507
Score = 30.4 bits (67), Expect = 5.0
Identities = 41/156 (26%), Positives = 57/156 (36%), Gaps = 16/156 (10%)
Query: 363 APQASVTA--PSEQTTEFGIHKPHLGKSSSLDKQ---LPGPS---GGEEEKPMGNGSPSP 414
+P A+ TA P+ T + +P SS + LPG + G E+ SP
Sbjct: 3198 SPGATGTALFPTRSATSVLVGEPTTSPISSGSTETTALPGSTTTAGLSEKSTTFYSSPRS 3257
Query: 415 PPGTSLDNPVPSPSPSEIFPVTHSFPSSAHSDTHHTST---AESQKKATAEGSAGRVENF 471
P T S SE +HS P S H+ ST SQ+ + S G +
Sbjct: 3258 PDTTLSPASTTSSGVSEESTTSHSRPGSTHTTAFPGSTTMPGVSQESTASHSSPGSTDT- 3316
Query: 472 GKRKPLLQAWVSPSETHPVSAQPGAGTGSAKHRLHP 507
L + S P S +G GS + L P
Sbjct: 3317 ----TLSPGSTTASSLGPESTTFHSGPGSTETTLLP 3348
Score = 30.4 bits (67), Expect = 5.0
Identities = 34/110 (30%), Positives = 42/110 (38%), Gaps = 11/110 (10%)
Query: 370 APSEQTTE--FGIHKP-HLGKSSSLDKQLPG----PSGGEEEKPMGNGSPSPPPGTSLDN 422
+P+ TT G P L SS+ LPG PS E+ SP P T
Sbjct: 4039 SPARSTTSGLVGESTPSRLSPSSTETTTLPGSPTTPSLSEKSTTFYT-SPRSPDATLSPA 4097
Query: 423 PVPSPSPSEIFPVTHSFPSSAHSDTHHTSTAE---SQKKATAEGSAGRVE 469
S SE +HS P S H+ ST SQ+ T+ S G E
Sbjct: 4098 TTTSSGVSEESSTSHSQPGSTHTTAFPDSTTTSGLSQEPTTSHSSQGSTE 4147
Score = 29.6 bits (65), Expect = 8.5
Identities = 35/129 (27%), Positives = 45/129 (34%), Gaps = 12/129 (9%)
Query: 352 LGEGLCDFRLQAPQASVTAPSEQTTEFGI----HKPHLGKSSSLDKQLPG----PSGGEE 403
LGE F + T ++T G+ L SS+ LPG PS E+
Sbjct: 2937 LGEESTTFPSSSGSTGTTLSPARSTTSGLVGESTPSRLSPSSTETTTLPGSPTTPSLSEK 2996
Query: 404 EKPMGNGSPSPPPGTSLDNPVPSPSPSEIFPVTHSFPSSAHSDTHHTSTAE---SQKKAT 460
SP P T S SE +HS P S H+ ST SQ+
Sbjct: 2997 STTFYT-SPRSPDATLSPATTTSSGVSEESSTSHSQPGSTHTTAFPDSTTTSGLSQEPTA 3055
Query: 461 AEGSAGRVE 469
+ S G E
Sbjct: 3056 SHSSQGSTE 3064
>gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo
sapiens]
Length = 2036
Score = 39.7 bits (91), Expect = 0.008
Identities = 78/392 (19%), Positives = 133/392 (33%), Gaps = 52/392 (13%)
Query: 146 TEEAVAGAALLVEGHSSCPQE-LNPAWSVAGNASDGEPPESPHAEDSERESVTT------ 198
T + A++ V + P L+PA S P ++D+ TT
Sbjct: 227 TASGLLEASMPVHSSTRSPHTTLSPAGSTTRQGESTTFHSWPSSKDTRPAPPTTTSAFVE 286
Query: 199 PGPATCGAPAS-PADHLLLPSQEESFSEVPMSEASSAKDTPLFRMEGEDALVTQYQSKAS 257
P + G+P+S P H+ S E + SS T D + + +
Sbjct: 287 PSTTSHGSPSSIPTTHISARSTTSGLVEESTTYHSSPGSTQTMHFPESDTTSGRGEESTT 346
Query: 258 DHEG----LLSDPLSDLQLVSDFKSPIMADLNLSLPSIPEVASDDERIDQVEDDGDQVED 313
H + S P + LV + S + + + P+ ++ R ++
Sbjct: 347 SHSSTTHTISSAPSTTSALVEEPTSYHSSPGSTATTHFPDSSTTSGRSEE---------- 396
Query: 314 DGETAKSSTLDIGALSLGLVVPCPERGKGPSGEADRLVLGEGLCDFRLQAPQASVTAP-- 371
TA S+ D +V+P GE+ + G A S T P
Sbjct: 397 --STASHSSQDATGT---IVLPARSTTSVLLGESTTSPISSG--SMETTALPGSTTTPGL 449
Query: 372 SEQTTEFGIHKPHLGKSSSLDKQLPGPSGGEEEKPMGNGSPSPPPGTSLDNPVPSPSPSE 431
SE++T F H +++L SG EE P T+ + +P S
Sbjct: 450 SERSTTF--HSSPRSPATTLSPASTTSSGVSEESTTSRSRPGSTHTTAFPDSTTTPGLSR 507
Query: 432 IFPVTHSFPSSAHS---DTHHTSTAESQKKATAEGSAGRVE-----------NFGKRKPL 477
+HS P S + T++ SQ+ T+ S+G + +FG+
Sbjct: 508 HSTTSHSSPGSTDTTLLPASTTTSGPSQESTTSHSSSGSTDTALSPGSTTALSFGQESTT 567
Query: 478 LQAWVSPSETHPV---SAQPGAGTGSAKHRLH 506
+ +P TH + +G A R+H
Sbjct: 568 FHS--NPGSTHTTLFPDSTTSSGIVEASTRVH 597
Score = 30.4 bits (67), Expect = 5.0
Identities = 34/110 (30%), Positives = 42/110 (38%), Gaps = 11/110 (10%)
Query: 370 APSEQTTE--FGIHKP-HLGKSSSLDKQLPG----PSGGEEEKPMGNGSPSPPPGTSLDN 422
+P+ TT G P L SS+ LPG PS E+ SP P T
Sbjct: 886 SPARSTTSGLVGESTPSRLSPSSTETTTLPGSPTTPSLSEKSTTFYT-SPRSPDATLSPA 944
Query: 423 PVPSPSPSEIFPVTHSFPSSAHSDTHHTSTAE---SQKKATAEGSAGRVE 469
S SE +HS P S H+ ST SQ+ T+ S G E
Sbjct: 945 TTTSSGVSEESSTSHSQPGSTHTTAFPDSTTTSDLSQEPTTSHSSQGSTE 994
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 39.7 bits (91), Expect = 0.008
Identities = 106/517 (20%), Positives = 174/517 (33%), Gaps = 66/517 (12%)
Query: 17 ELEESLPEQPETGRQEEELPRFPCKKQDYSPSSGEAQ--EVPFALSLSSDGAVSPVGELA 74
E E E + E E P + + P S + + E + + S+GA +P E
Sbjct: 1855 EAEGDAQEAEGEAQPESEDVEAPEAEGEAQPESEDVETPEAEWEVQPESEGAEAPEAEKE 1914
Query: 75 AGGDRD----LESQAGSLVESKARDAAE-EVAPPLPMGASVPSIDSMMRKLEEMGLNLRK 129
A + + LE++ ES+ +A E E A G + P + + + E +
Sbjct: 1915 AQPETESVEALETEGEDEPESEGAEAQEAEEAAQEAEGQTQPESEVIESQEAE-----EE 1969
Query: 130 DQKKTKKRVSFSEQLFTEEAVAGAALLVEGHSSCPQ---ELNPAWSVAGNASDGEPPESP 186
Q +++ + ++ T+EA G A P+ E+ A A SDG + P
Sbjct: 1970 AQPESEDVEALEVEVETQEA-EGEAQPESEDVEAPEAEGEMQEAEEEAQPESDGVEAQ-P 2027
Query: 187 HAEDSERESVTTPGPATCGAPASPADHLLLPSQEESFSEVPMSEASSAKDTPLFRMEGED 246
+E E + V T G +D + P EE E E A+ E D
Sbjct: 2028 KSEGEEAQEVEGETQKTEGDAQPESDGVEAPEAEEEAQEAE-GEVQEAEGEAHPESEDVD 2086
Query: 247 ALVTQYQSKASDHEGLLSDPLSDLQLVSDFKSPIMA------DLNLSLPSIP-EVASDDE 299
A + +++ + + Q ++P + P E + E
Sbjct: 2087 AQEAEGEAQPESEGVEAPEAEGEAQKAEGIEAPETEGEAQPESEGIEAPEAEGEAQPESE 2146
Query: 300 RIDQVEDDGD-QVEDDGETAKSSTLDIGALSLGLVVPCPERGKGPSGEADRLVLGEGLCD 358
++ + +G+ Q E +G A+ + + G+ P E P E EG
Sbjct: 2147 GVEAQDAEGEAQPESEGIEAQEAEEEAQPELEGVEAPEAEGEAQPESEGIEAPEAEGEAQ 2206
Query: 359 FRLQAPQASVTAPSEQTTEFGIHKPHL---------GKSSSLDKQLPGPSGG-------- 401
L+ +A Q G+ P G++ K P S G
Sbjct: 2207 PELEGVEAPEAEEEAQPEPEGVETPEAEGEAQPESEGETQGEKKGSPQVSLGDGQSEEAS 2266
Query: 402 EEEKPMGNGSPSPPPGTSLDNPVPSPSPSEIFPVT-----------------HSFPSSAH 444
E P+ P+PPP D P P S+ P + H +
Sbjct: 2267 ESSSPVPEDRPTPPPSPGGDTPHQRPG-SQTGPSSSRASSWGNCWQKDSENDHVLGDTRS 2325
Query: 445 SDTHHTSTAESQKKAT---AEGSAGRVEN--FGKRKP 476
D T T +++KAT E S E G R P
Sbjct: 2326 PDAKSTGTPHAERKATRMYPESSTSEQEEAPLGSRTP 2362
Score = 39.3 bits (90), Expect = 0.011
Identities = 75/351 (21%), Positives = 121/351 (34%), Gaps = 38/351 (10%)
Query: 71 GELAAGGDRDLESQAGSLVESKARDAAEEVAPPLPMGASVPSIDSMMRKLEEMGLNLRKD 130
GE AAGGD+D G+ E AE A P G P + ++ E
Sbjct: 1816 GEAAAGGDQDPGQSDGA--EGIEAPEAEGEAQPESEGVEAPEAEGDAQEAE--------- 1864
Query: 131 QKKTKKRVSFSEQLFTEEAVAGAALLVEGHSSCPQELNPAWSVAGNASDGEPPESPHAED 190
+ SE + EA A + S + W V + E PE+
Sbjct: 1865 ----GEAQPESEDVEAPEAEGEA----QPESEDVETPEAEWEVQPESEGAEAPEAEKEAQ 1916
Query: 191 SERESV---TTPG---PATCGAPASPADHLLLPSQEESFSEVPMSEASSAKDTPLFRMEG 244
E ESV T G P + GA A A+ ++ ++ E + E+ A++ E
Sbjct: 1917 PETESVEALETEGEDEPESEGAEAQEAEEAAQEAEGQTQPESEVIESQEAEEEAQPESED 1976
Query: 245 EDALVTQYQSKASDHEGLLSDPLSDLQLVSDFKSPIMADLNLSLPSIPEVASDDERIDQV 304
+AL + +++ ++ E + P S+ D ++P + SD
Sbjct: 1977 VEALEVEVETQEAEGE---AQPESE-----DVEAPEAEGEMQEAEEEAQPESDGVEAQPK 2028
Query: 305 EDDGDQVEDDGETAKSSTLDIGALSLGLVVP-CPERGKGPSGEADRLVLGEGLCDFRLQA 363
+ + E +GET K+ D S G+ P E + GE EG +
Sbjct: 2029 SEGEEAQEVEGETQKTEG-DAQPESDGVEAPEAEEEAQEAEGEVQE---AEGEAHPESED 2084
Query: 364 PQASVTAPSEQTTEFGIHKPHLGKSSSLDKQLPGPSGGEEEKPMGNGSPSP 414
A Q G+ P + + + P E +P G +P
Sbjct: 2085 VDAQEAEGEAQPESEGVEAPEAEGEAQKAEGIEAPETEGEAQPESEGIEAP 2135
Score = 36.2 bits (82), Expect = 0.091
Identities = 46/189 (24%), Positives = 61/189 (32%), Gaps = 29/189 (15%)
Query: 291 IPEVASDDERIDQVEDDGDQVEDDGETAKSSTLDIGALSLGLVVP-----CPERGKGPSG 345
IP SD G++ D + + L +G G V P C + G P+
Sbjct: 776 IPPHTSDSCSKSGAASLGEEARDTPQPSSPLVLQVGRPEQGAVGPHRSHCCSQPGTQPAQ 835
Query: 346 EADRLVLGEG--LCDFRLQAPQASVTAPSEQTTEFGIHKPHLGKSSSLDKQLPGPSGGEE 403
EA R E LC P P +++ G SS GP G
Sbjct: 836 EAQRGPSPEASWLCGRYCPTPPRGRPCPQRRSSSCG------STGSSHQSTARGPGG--- 886
Query: 404 EKPMGNGSPSPPPGTSLDNPVPSPSPSEIFPVTHSFPSSAHSDTHHTSTAESQKKATAEG 463
SP GT P PSP P+ S SSA +E + + G
Sbjct: 887 ---------SPQEGTRQPGPTPSPGPNS----GASRRSSASQGAGSRGLSEEKTLRSGGG 933
Query: 464 SAGRVENFG 472
G+ E G
Sbjct: 934 PQGQEEASG 942
>gi|239508790 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 490
Score = 39.3 bits (90), Expect = 0.011
Identities = 76/295 (25%), Positives = 103/295 (34%), Gaps = 58/295 (19%)
Query: 168 NPAWSVAGNASDGEPPESPHAEDSERESVTTPGPATCGAPASPADHLLLPSQEESFSEVP 227
+P V SD P S S+ S + P P+ P+D LPS S S VP
Sbjct: 186 SPPSDVPSPPSDVPSPPSDVPLLSDVPSPPSDVPLLSDVPSPPSDVPSLPSDVPSLSGVP 245
Query: 228 M----------------SEASSAKDTPLFRMEGEDALVTQYQSKASDHEGLLS---DPLS 268
S+ S D P +L++ S SD LLS P S
Sbjct: 246 SPPSDVPSLLSGVPSPPSDISPPSDVP--------SLLSDVPSLPSDVPSLLSGVPSPPS 297
Query: 269 DL-QLVSDFKSPIMADLNLSLPS-IPEVASDDERIDQVEDDGDQVEDDGETAKSSTLDIG 326
D+ L+SD SP PS +P SD + V V S D+
Sbjct: 298 DVPSLLSDVPSP---------PSDVPSPPSDIPLLSGVPSPPSDVPSPPSDVPSPPSDVP 348
Query: 327 ALSLGLVVPCPERGKGPSGEADRLVLGEGLCDFRLQAPQASVTAPSEQTTEFGIHKPHLG 386
LS VP P + L G+ P ++ + + + PH
Sbjct: 349 LLS---GVPSP---------LSDVPLLSGVPSPPSDVPSLLMSPHRLLMSHYSLVSPHRL 396
Query: 387 KSSSLDKQLPGPSGGEEEKPMGNGSPSPPPGTSLDNPVPS-----PSPSEIFPVT 436
SL +P G P +G PS P G + + VPS PSPS + P+T
Sbjct: 397 DVPSLLSDVPSLLSGVPSSP--SGVPSLPSGVPILSGVPSLPSGVPSPSGV-PIT 448
>gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 38.9 bits (89), Expect = 0.014
Identities = 84/368 (22%), Positives = 140/368 (38%), Gaps = 70/368 (19%)
Query: 9 TEKNTSSLELEESLPEQPETGRQEEELPRFPCKKQDYSPSSGEAQEVPFALSLSSDGAVS 68
+++ L L + P Q+ +L P + S +A+E L+L D A++
Sbjct: 667 SQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAEE---GLTLPQDSAMT 723
Query: 69 PVGELAAGGDRDLESQ-----AGSLVESKARDAA-----EEVAPPLPMG----ASVP--- 111
P L D DL S A +LV +A + + PPLP+ +S P
Sbjct: 724 PPLPLQ---DTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPV 780
Query: 112 SIDSMMRKLEEMGLNLRKDQKKTKKRVSFSEQLFTEEAVAGAALLVEGHSSCPQELNPAW 171
+ +++ + E GL L +D T L SS P+ + A
Sbjct: 781 AAATIVSQQAEEGLTLPQDSAMTPPLPLQDTDL----------------SSAPKPVAAAT 824
Query: 172 SVAGNASDG-----EPPESPHAEDSERESVTTPGPATCGAPASPA--DHLLLPSQEESFS 224
V+ A +G + +P + + + P P P S + L LP +
Sbjct: 825 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATPVSQQAEEGLTLPQDSAMTA 884
Query: 225 EVPMSEASSAKDTPLFRMEGEDALVTQYQSKASDHEGLLSDPLSDL--QLVSDFKSPIMA 282
+P+ + + L Q++A G ++P++ + Q V + P A
Sbjct: 885 PLPLQDTGPTSGPEPLAVATPQTL----QAEAGCAPG--TEPVATMAQQEVGEALGPRPA 938
Query: 283 --DLNLSLPSIPEVASDDERIDQVEDDGDQVEDDGETA------KSSTLDIGALSLGLVV 334
+ N +LP++PE A+ +DQV+ D Q + T STL + ALSL
Sbjct: 939 PEEKNAALPTVPEPAA----LDQVQQDDPQPAAEAGTPWAAQEDADSTLGMEALSL---- 990
Query: 335 PCPERGKG 342
P P G G
Sbjct: 991 PEPASGAG 998
>gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 38.9 bits (89), Expect = 0.014
Identities = 84/368 (22%), Positives = 140/368 (38%), Gaps = 70/368 (19%)
Query: 9 TEKNTSSLELEESLPEQPETGRQEEELPRFPCKKQDYSPSSGEAQEVPFALSLSSDGAVS 68
+++ L L + P Q+ +L P + S +A+E L+L D A++
Sbjct: 667 SQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAEE---GLTLPQDSAMT 723
Query: 69 PVGELAAGGDRDLESQ-----AGSLVESKARDAA-----EEVAPPLPMG----ASVP--- 111
P L D DL S A +LV +A + + PPLP+ +S P
Sbjct: 724 PPLPLQ---DTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPV 780
Query: 112 SIDSMMRKLEEMGLNLRKDQKKTKKRVSFSEQLFTEEAVAGAALLVEGHSSCPQELNPAW 171
+ +++ + E GL L +D T L SS P+ + A
Sbjct: 781 AAATIVSQQAEEGLTLPQDSAMTPPLPLQDTDL----------------SSAPKPVAAAT 824
Query: 172 SVAGNASDG-----EPPESPHAEDSERESVTTPGPATCGAPASPA--DHLLLPSQEESFS 224
V+ A +G + +P + + + P P P S + L LP +
Sbjct: 825 IVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATPVSQQAEEGLTLPQDSAMTA 884
Query: 225 EVPMSEASSAKDTPLFRMEGEDALVTQYQSKASDHEGLLSDPLSDL--QLVSDFKSPIMA 282
+P+ + + L Q++A G ++P++ + Q V + P A
Sbjct: 885 PLPLQDTGPTSGPEPLAVATPQTL----QAEAGCAPG--TEPVATMAQQEVGEALGPRPA 938
Query: 283 --DLNLSLPSIPEVASDDERIDQVEDDGDQVEDDGETA------KSSTLDIGALSLGLVV 334
+ N +LP++PE A+ +DQV+ D Q + T STL + ALSL
Sbjct: 939 PEEKNAALPTVPEPAA----LDQVQQDDPQPAAEAGTPWAAQEDADSTLGMEALSL---- 990
Query: 335 PCPERGKG 342
P P G G
Sbjct: 991 PEPASGAG 998
>gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 38.9 bits (89), Expect = 0.014
Identities = 84/368 (22%), Positives = 140/368 (38%), Gaps = 70/368 (19%)
Query: 9 TEKNTSSLELEESLPEQPETGRQEEELPRFPCKKQDYSPSSGEAQEVPFALSLSSDGAVS 68
+++ L L + P Q+ +L P + S +A+E L+L D A++
Sbjct: 667 SQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAEE---GLTLPQDSAMT 723
Query: 69 PVGELAAGGDRDLESQ-----AGSLVESKARDAA-----EEVAPPLPMG----ASVP--- 111
P L D DL S A +LV +A + + PPLP+ +S P
Sbjct: 724 PPLPLQ---DTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPV 780
Query: 112 SIDSMMRKLEEMGLNLRKDQKKTKKRVSFSEQLFTEEAVAGAALLVEGHSSCPQELNPAW 171
+ +++ + E GL L +D T L SS P+ + A
Sbjct: 781 AAATIVSQQAEEGLTLPQDSAMTPPLPLQDTDL----------------SSAPKPVAAAT 824
Query: 172 SVAGNASDG-----EPPESPHAEDSERESVTTPGPATCGAPASPA--DHLLLPSQEESFS 224
V+ A +G + +P + + + P P P S + L LP +
Sbjct: 825 IVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATPVSQQAEEGLTLPQDSAMTA 884
Query: 225 EVPMSEASSAKDTPLFRMEGEDALVTQYQSKASDHEGLLSDPLSDL--QLVSDFKSPIMA 282
+P+ + + L Q++A G ++P++ + Q V + P A
Sbjct: 885 PLPLQDTGPTSGPEPLAVATPQTL----QAEAGCAPG--TEPVATMAQQEVGEALGPRPA 938
Query: 283 --DLNLSLPSIPEVASDDERIDQVEDDGDQVEDDGETA------KSSTLDIGALSLGLVV 334
+ N +LP++PE A+ +DQV+ D Q + T STL + ALSL
Sbjct: 939 PEEKNAALPTVPEPAA----LDQVQQDDPQPAAEAGTPWAAQEDADSTLGMEALSL---- 990
Query: 335 PCPERGKG 342
P P G G
Sbjct: 991 PEPASGAG 998
>gi|46852390 coiled-coil domain containing 6 [Homo sapiens]
Length = 474
Score = 38.9 bits (89), Expect = 0.014
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Query: 379 GIHKPHLGKSSSLDKQLPGPSGGEEEKPMGNGSPSPPPGTSLDNPVPSPSPSEIFPVTHS 438
G+H H+G S + + PS P P+PPP + PV P P P+ +
Sbjct: 397 GLHVQHMGTSHGITR----PSPRRSNSPDKFKRPTPPPSPNTQTPVQPPPPPPPPPMQPT 452
Query: 439 FPSSAHSD---THHTSTAESQ 456
PS+A S + H++ SQ
Sbjct: 453 VPSAATSQPTPSQHSAHPSSQ 473
>gi|226437579 NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 38.5 bits (88), Expect = 0.018
Identities = 83/368 (22%), Positives = 140/368 (38%), Gaps = 70/368 (19%)
Query: 9 TEKNTSSLELEESLPEQPETGRQEEELPRFPCKKQDYSPSSGEAQEVPFALSLSSDGAVS 68
+++ L L + P Q+ +L P + S +A+E L+L D A++
Sbjct: 707 SQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAEE---GLTLPQDSAMT 763
Query: 69 PVGELAAGGDRDLESQ-----AGSLVESKARDAA-----EEVAPPLPMG----ASVP--- 111
P L D DL S A ++V +A + + PPLP+ +S P
Sbjct: 764 PPLPLQ---DTDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPV 820
Query: 112 SIDSMMRKLEEMGLNLRKDQKKTKKRVSFSEQLFTEEAVAGAALLVEGHSSCPQELNPAW 171
+ +++ + E GL L +D T L SS P+ + A
Sbjct: 821 AAATIVSQQAEEGLTLPQDSAMTPPLPLQDTDL----------------SSAPKPVAAAT 864
Query: 172 SVAGNASDG-----EPPESPHAEDSERESVTTPGPATCGAPASPA--DHLLLPSQEESFS 224
V+ A +G + +P + + + P P P S + L LP +
Sbjct: 865 PVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATPVSQQAEEGLTLPQDSAMTA 924
Query: 225 EVPMSEASSAKDTPLFRMEGEDALVTQYQSKASDHEGLLSDPLSDL--QLVSDFKSPIMA 282
+P+ + + L Q++A G ++P++ + Q V + P A
Sbjct: 925 PLPLQDTGPTSGPEPLAVATPQTL----QAEAGCAPG--TEPVATMAQQEVGEALGPRPA 978
Query: 283 --DLNLSLPSIPEVASDDERIDQVEDDGDQVEDDGETA------KSSTLDIGALSLGLVV 334
+ N +LP++PE A+ +DQV+ D Q + T STL + ALSL
Sbjct: 979 PEEKNAALPTVPEPAA----LDQVQQDDPQPAAEAGTPWAAQEDADSTLGMEALSL---- 1030
Query: 335 PCPERGKG 342
P P G G
Sbjct: 1031 PEPASGAG 1038
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.306 0.126 0.353
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,813,426
Number of Sequences: 37866
Number of extensions: 1624313
Number of successful extensions: 10413
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 407
Number of HSP's that attempted gapping in prelim test: 9148
Number of HSP's gapped (non-prelim): 1636
length of query: 612
length of database: 18,247,518
effective HSP length: 108
effective length of query: 504
effective length of database: 14,157,990
effective search space: 7135626960
effective search space used: 7135626960
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.