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Search of human proteins with 4885543
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4885543 pyruvate dehydrogenase E1 alpha 2 [Homo sapiens]
(388 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4885543 pyruvate dehydrogenase E1 alpha 2 [Homo sapiens] 789 0.0
gi|4505685 pyruvate dehydrogenase E1 alpha 1 precursor [Homo sap... 682 0.0
gi|11386135 branched chain keto acid dehydrogenase E1, alpha pol... 115 5e-26
gi|38788380 dehydrogenase E1 and transketolase domain containing... 46 7e-05
gi|51873036 oxoglutarate (alpha-ketoglutarate) dehydrogenase (li... 36 0.052
gi|19923592 oxysterol binding protein-like 11 [Homo sapiens] 33 0.57
gi|21362052 carbohydrate (N-acetylglucosamine 6-O) sulfotransfer... 32 1.3
gi|205277463 transketolase isoform 1 [Homo sapiens] 32 1.3
gi|4507521 transketolase isoform 1 [Homo sapiens] 32 1.3
gi|157388965 schlafen family member 11 [Homo sapiens] 30 2.8
gi|157388963 schlafen family member 11 [Homo sapiens] 30 2.8
gi|157388961 schlafen family member 11 [Homo sapiens] 30 2.8
gi|157388959 schlafen family member 11 [Homo sapiens] 30 2.8
gi|157388957 schlafen family member 11 [Homo sapiens] 30 2.8
gi|93141226 X-prolyl aminopeptidase 2, membrane-bound [Homo sapi... 29 6.3
gi|50593110 5' nucleotidase, cytosolic IB isoform 1 [Homo sapiens] 29 6.3
gi|50593108 5' nucleotidase, cytosolic IB isoform 2 [Homo sapiens] 29 6.3
gi|133778974 transketolase-like 2 [Homo sapiens] 29 8.3
>gi|4885543 pyruvate dehydrogenase E1 alpha 2 [Homo sapiens]
Length = 388
Score = 789 bits (2038), Expect = 0.0
Identities = 388/388 (100%), Positives = 388/388 (100%)
Query: 1 MLAAFISRVLRRVAQKSARRVLVASRNSSNDATFEIKKCDLYLLEEGPPVTTVLTRAEGL 60
MLAAFISRVLRRVAQKSARRVLVASRNSSNDATFEIKKCDLYLLEEGPPVTTVLTRAEGL
Sbjct: 1 MLAAFISRVLRRVAQKSARRVLVASRNSSNDATFEIKKCDLYLLEEGPPVTTVLTRAEGL 60
Query: 61 KYYRMMLTVRRMELKADQLYKQKFIRGFCHLCDGQEACCVGLEAGINPSDHVITSYRAHG 120
KYYRMMLTVRRMELKADQLYKQKFIRGFCHLCDGQEACCVGLEAGINPSDHVITSYRAHG
Sbjct: 61 KYYRMMLTVRRMELKADQLYKQKFIRGFCHLCDGQEACCVGLEAGINPSDHVITSYRAHG 120
Query: 121 VCYTRGLSVRSILAELTGRRGGCAKGKGGSMHMYTKNFYGGNGIVGAQGPLGAGIALACK 180
VCYTRGLSVRSILAELTGRRGGCAKGKGGSMHMYTKNFYGGNGIVGAQGPLGAGIALACK
Sbjct: 121 VCYTRGLSVRSILAELTGRRGGCAKGKGGSMHMYTKNFYGGNGIVGAQGPLGAGIALACK 180
Query: 181 YKGNDEICLTLYGDGAANQGQIAEAFNMAALWKLPCVFICENNLYGMGTSTERAAASPDY 240
YKGNDEICLTLYGDGAANQGQIAEAFNMAALWKLPCVFICENNLYGMGTSTERAAASPDY
Sbjct: 181 YKGNDEICLTLYGDGAANQGQIAEAFNMAALWKLPCVFICENNLYGMGTSTERAAASPDY 240
Query: 241 YKRGNFIPGLKVDGMDVLCVREATKFAANYCRSGKGPILMELQTYRYHGHSMSDPGVSYR 300
YKRGNFIPGLKVDGMDVLCVREATKFAANYCRSGKGPILMELQTYRYHGHSMSDPGVSYR
Sbjct: 241 YKRGNFIPGLKVDGMDVLCVREATKFAANYCRSGKGPILMELQTYRYHGHSMSDPGVSYR 300
Query: 301 TREEIQEVRSKRDPIIILQDRMVNSKLATVEELKEIGAEVRKEIDDAAQFATTDPEPHLE 360
TREEIQEVRSKRDPIIILQDRMVNSKLATVEELKEIGAEVRKEIDDAAQFATTDPEPHLE
Sbjct: 301 TREEIQEVRSKRDPIIILQDRMVNSKLATVEELKEIGAEVRKEIDDAAQFATTDPEPHLE 360
Query: 361 ELGHHIYSSDSSFEVRGANPWIKFKSVS 388
ELGHHIYSSDSSFEVRGANPWIKFKSVS
Sbjct: 361 ELGHHIYSSDSSFEVRGANPWIKFKSVS 388
>gi|4505685 pyruvate dehydrogenase E1 alpha 1 precursor [Homo
sapiens]
Length = 390
Score = 682 bits (1760), Expect = 0.0
Identities = 333/388 (85%), Positives = 356/388 (91%), Gaps = 1/388 (0%)
Query: 1 MLAAFISRVLRRVAQKSARRVLVASRNSSNDATFEIKKCDLYLLEEGPPVTTVLTRAEGL 60
MLAA +SRVL +QK A RVLVASRN +NDATFEIKKCDL+ LEEGPPVTTVLTR +GL
Sbjct: 4 MLAA-VSRVLSGASQKPASRVLVASRNFANDATFEIKKCDLHRLEEGPPVTTVLTREDGL 62
Query: 61 KYYRMMLTVRRMELKADQLYKQKFIRGFCHLCDGQEACCVGLEAGINPSDHVITSYRAHG 120
KYYRMM TVRRMELKADQLYKQK IRGFCHLCDGQEACCVGLEAGINP+DH+IT+YRAHG
Sbjct: 63 KYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHG 122
Query: 121 VCYTRGLSVRSILAELTGRRGGCAKGKGGSMHMYTKNFYGGNGIVGAQGPLGAGIALACK 180
+TRGLSVR ILAELTGR+GGCAKGKGGSMHMY KNFYGGNGIVGAQ PLGAGIALACK
Sbjct: 123 FTFTRGLSVREILAELTGRKGGCAKGKGGSMHMYAKNFYGGNGIVGAQVPLGAGIALACK 182
Query: 181 YKGNDEICLTLYGDGAANQGQIAEAFNMAALWKLPCVFICENNLYGMGTSTERAAASPDY 240
Y G DE+CLTLYGDGAANQGQI EA+NMAALWKLPC+FICENN YGMGTS ERAAAS DY
Sbjct: 183 YNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDY 242
Query: 241 YKRGNFIPGLKVDGMDVLCVREATKFAANYCRSGKGPILMELQTYRYHGHSMSDPGVSYR 300
YKRG+FIPGL+VDGMD+LCVREAT+FAA YCRSGKGPILMELQTYRYHGHSMSDPGVSYR
Sbjct: 243 YKRGDFIPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYR 302
Query: 301 TREEIQEVRSKRDPIIILQDRMVNSKLATVEELKEIGAEVRKEIDDAAQFATTDPEPHLE 360
TREEIQEVRSK DPI++L+DRMVNS LA+VEELKEI EVRKEI+DAAQFAT DPEP LE
Sbjct: 303 TREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLE 362
Query: 361 ELGHHIYSSDSSFEVRGANPWIKFKSVS 388
ELG+HIYSSD FEVRGAN WIKFKSVS
Sbjct: 363 ELGYHIYSSDPPFEVRGANQWIKFKSVS 390
>gi|11386135 branched chain keto acid dehydrogenase E1, alpha
polypeptide [Homo sapiens]
Length = 445
Score = 115 bits (289), Expect = 5e-26
Identities = 89/318 (27%), Positives = 141/318 (44%), Gaps = 5/318 (1%)
Query: 54 LTRAEGLKYYRMMLTVRRMELKADQLYKQKFIRGFCHLCDGQEACCVGLEAGINPSDHVI 113
L + + LK Y+ M + M+ + +Q I F G+E VG A ++ +D V
Sbjct: 97 LPKEKVLKLYKSMTLLNTMDRILYESQRQGRI-SFYMTNYGEEGTHVGSAAALDNTDLVF 155
Query: 114 TSYRAHGVCYTRGLSVRSILAELTGRRGGCAKGKGGSMHMYTK--NFYGGNGIVGAQGPL 171
YR GV R + +A+ G KG+ +H K +F + + Q P
Sbjct: 156 GQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQ 215
Query: 172 GAGIALACKYKGNDEICLTLYGDGAANQGQIAEAFNMAALWKLPCVFICENNLYGMGTST 231
G A A K + + + +G+GAA++G FN AA + P +F C NN Y + T T
Sbjct: 216 AVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPT 275
Query: 232 ERAAASPDYYKRGNF--IPGLKVDGMDVLCVREATKFAANYCRSGKGPILMELQTYRYHG 289
RG I ++VDG DV V ATK A + P L+E TYR
Sbjct: 276 SEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGH 335
Query: 290 HSMSDPGVSYRTREEIQEVRSKRDPIIILQDRMVNSKLATVEELKEIGAEVRKEIDDAAQ 349
HS SD +YR+ +E+ + PI L+ +++ E+ K + R+++ +A +
Sbjct: 336 HSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVMEAFE 395
Query: 350 FATTDPEPHLEELGHHIY 367
A P+P+ L +Y
Sbjct: 396 QAERKPKPNPNLLFSDVY 413
>gi|38788380 dehydrogenase E1 and transketolase domain containing 1
[Homo sapiens]
Length = 919
Score = 45.8 bits (107), Expect = 7e-05
Identities = 46/189 (24%), Positives = 80/189 (42%), Gaps = 18/189 (9%)
Query: 183 GNDEICLTLYGDGA-ANQGQIAEAFNMAALWKLPC---VFICENNLYGMGTSTERAAASP 238
G+ ICL ++GD + QG + E F ++ L V + NN G T ER +S
Sbjct: 322 GDRVICLQVHGDASFCGQGIVPETFTLSNLPHFRIGGSVHLIVNNQLGYTTPAERGRSSL 381
Query: 239 DYYKRGNFIPG--LKVDGMDVLCVREATKFAANYCRSGKGPILMELQTYRYHGHSMSDPG 296
G + + V+G V AT+ A Y R + ++++L YR GH+ D
Sbjct: 382 YCSDIGKLVGCAIIHVNGDSPEEVVRATRLAFEYQRQFRKDVIIDLLCYRQWGHNELDEP 441
Query: 297 VSYRTREEIQEVRSKRDPIIILQDRMVNSKLATVEELKEIGAEVRKEIDDAAQFATTDPE 356
Y + +R+++ + ++ L T EE+ EI + +++D
Sbjct: 442 F-YTNPIMYKIIRARKSIPDTYAEHLIAGGLMTQEEVSEIKSSYYAKLND---------- 490
Query: 357 PHLEELGHH 365
HL + H+
Sbjct: 491 -HLNNMAHY 498
>gi|51873036 oxoglutarate (alpha-ketoglutarate) dehydrogenase
(lipoamide) isoform 1 precursor [Homo sapiens]
Length = 1023
Score = 36.2 bits (82), Expect = 0.052
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 8/120 (6%)
Query: 182 KGNDEICLTLYGDGA-ANQGQIAEAFNMAALWKLPC---VFICENNLYGMGTSTERAAAS 237
+G + + L+GD A A QG + E F+++ L V + NN G T A +S
Sbjct: 399 EGKKVMSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSS 458
Query: 238 P---DYYKRGNFIPGLKVDGMDVLCVREATKFAANYCRSGKGPILMELQTYRYHGHSMSD 294
P D + N P V+ D V K AA + + ++++L YR +GH+ D
Sbjct: 459 PYPTDVARVVN-APIFHVNSDDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMD 517
>gi|19923592 oxysterol binding protein-like 11 [Homo sapiens]
Length = 747
Score = 32.7 bits (73), Expect = 0.57
Identities = 33/105 (31%), Positives = 44/105 (41%), Gaps = 19/105 (18%)
Query: 76 ADQLYKQKFIRGFCHLCDGQEACC----------VGLEAGINPSDHVITSYRAHGVCYTR 125
A+Q+ + GF C ++ C +G+ G+ I S HG YT
Sbjct: 506 AEQVSHHPPVSGFYAECTERKMCVNAHVWTKSKFLGMSIGVTMVGEGILSLLEHGEEYTF 565
Query: 126 GLS---VRSILA----ELTGRRG-GCAK-GKGGSMHMYTKNFYGG 161
L RSIL EL G+ CAK G S+ +TK FYGG
Sbjct: 566 SLPCAYARSILTVPWVELGGKVSVNCAKTGYSASITFHTKPFYGG 610
>gi|21362052 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase
5 [Homo sapiens]
Length = 411
Score = 31.6 bits (70), Expect = 1.3
Identities = 40/187 (21%), Positives = 67/187 (35%), Gaps = 37/187 (19%)
Query: 203 AEAFNMAALWKLPCVFICENNLYG------------MGTSTERAAASP---DYYKRGNFI 247
A +MA + +F+C+ +++ +T RA SP + RG
Sbjct: 107 AATLHMAVRDLMRSIFLCDMDVFDAYMPQSRNLSAFFNWATSRALCSPPACSAFPRGTIS 166
Query: 248 PGLKVDGMDVLCVREATKFAANYCRSGKGPILMELQTYRYH---------------GHSM 292
K D LC R+ A CRS +L E++ + H +
Sbjct: 167 ---KQDVCKTLCTRQPFSLAREACRSYSHVVLKEVRFFNLQVLYPLLSDPALNLRIVHLV 223
Query: 293 SDPGVSYRTREEIQEVRSKRDPIIILQDRMVNSKLATVEELKEIGAEVRKEIDDAAQFAT 352
DP R+RE + ++ + I++ N K + + EV + A+ AT
Sbjct: 224 RDPRAVLRSREAAGPILARDNGIVL----GTNGKWVEADPHLRLIREVCRSHVRIAEAAT 279
Query: 353 TDPEPHL 359
P P L
Sbjct: 280 LKPPPFL 286
>gi|205277463 transketolase isoform 1 [Homo sapiens]
Length = 623
Score = 31.6 bits (70), Expect = 1.3
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 167 AQGPLGAGIALAC--KYKGN--DEICLTLY---GDGAANQGQIAEAFNMAALWKLP-CVF 218
A G LG G+ AC Y G D+ +Y GDG ++G + EA A+++KL V
Sbjct: 121 ATGSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVA 180
Query: 219 ICENNLYGMGTSTERAAASPDYYKR 243
I + N G Y KR
Sbjct: 181 ILDINRLGQSDPAPLQHQMDIYQKR 205
>gi|4507521 transketolase isoform 1 [Homo sapiens]
Length = 623
Score = 31.6 bits (70), Expect = 1.3
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 167 AQGPLGAGIALAC--KYKGN--DEICLTLY---GDGAANQGQIAEAFNMAALWKLP-CVF 218
A G LG G+ AC Y G D+ +Y GDG ++G + EA A+++KL V
Sbjct: 121 ATGSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVA 180
Query: 219 ICENNLYGMGTSTERAAASPDYYKR 243
I + N G Y KR
Sbjct: 181 ILDINRLGQSDPAPLQHQMDIYQKR 205
>gi|157388965 schlafen family member 11 [Homo sapiens]
Length = 901
Score = 30.4 bits (67), Expect = 2.8
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 9/142 (6%)
Query: 6 ISRVLRRVAQKSARRVLVASRNSSNDATFEIKK---CDLYLLEEG--PPVTTVLTR--AE 58
+ ++ + Q R +L+ SR+ + D + K CD L+ + P + T+L AE
Sbjct: 423 LEELINKQMQPFFRGILIFSRSWAVDLNLQEKPGVICDALLIAQNSTPILYTILREQDAE 482
Query: 59 GLKYYRMMLTVRRMELKADQLYKQKFIRGFCHLCDGQEACCVGLEAGINPSDHVITSYRA 118
G Y + +L Y K LC E+ LEA ++P D+ SY
Sbjct: 483 GQDYCTRTAFTLKQKLVNMGGYTGKVCVRAKVLCLSPESSAEALEAAVSPMDYP-ASYSL 541
Query: 119 HGVCYTRGLSVRSILAELTGRR 140
G + L ++S++ L G R
Sbjct: 542 AGTQHMEAL-LQSLVIVLLGFR 562
>gi|157388963 schlafen family member 11 [Homo sapiens]
Length = 901
Score = 30.4 bits (67), Expect = 2.8
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 9/142 (6%)
Query: 6 ISRVLRRVAQKSARRVLVASRNSSNDATFEIKK---CDLYLLEEG--PPVTTVLTR--AE 58
+ ++ + Q R +L+ SR+ + D + K CD L+ + P + T+L AE
Sbjct: 423 LEELINKQMQPFFRGILIFSRSWAVDLNLQEKPGVICDALLIAQNSTPILYTILREQDAE 482
Query: 59 GLKYYRMMLTVRRMELKADQLYKQKFIRGFCHLCDGQEACCVGLEAGINPSDHVITSYRA 118
G Y + +L Y K LC E+ LEA ++P D+ SY
Sbjct: 483 GQDYCTRTAFTLKQKLVNMGGYTGKVCVRAKVLCLSPESSAEALEAAVSPMDYP-ASYSL 541
Query: 119 HGVCYTRGLSVRSILAELTGRR 140
G + L ++S++ L G R
Sbjct: 542 AGTQHMEAL-LQSLVIVLLGFR 562
>gi|157388961 schlafen family member 11 [Homo sapiens]
Length = 901
Score = 30.4 bits (67), Expect = 2.8
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 9/142 (6%)
Query: 6 ISRVLRRVAQKSARRVLVASRNSSNDATFEIKK---CDLYLLEEG--PPVTTVLTR--AE 58
+ ++ + Q R +L+ SR+ + D + K CD L+ + P + T+L AE
Sbjct: 423 LEELINKQMQPFFRGILIFSRSWAVDLNLQEKPGVICDALLIAQNSTPILYTILREQDAE 482
Query: 59 GLKYYRMMLTVRRMELKADQLYKQKFIRGFCHLCDGQEACCVGLEAGINPSDHVITSYRA 118
G Y + +L Y K LC E+ LEA ++P D+ SY
Sbjct: 483 GQDYCTRTAFTLKQKLVNMGGYTGKVCVRAKVLCLSPESSAEALEAAVSPMDYP-ASYSL 541
Query: 119 HGVCYTRGLSVRSILAELTGRR 140
G + L ++S++ L G R
Sbjct: 542 AGTQHMEAL-LQSLVIVLLGFR 562
>gi|157388959 schlafen family member 11 [Homo sapiens]
Length = 901
Score = 30.4 bits (67), Expect = 2.8
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 9/142 (6%)
Query: 6 ISRVLRRVAQKSARRVLVASRNSSNDATFEIKK---CDLYLLEEG--PPVTTVLTR--AE 58
+ ++ + Q R +L+ SR+ + D + K CD L+ + P + T+L AE
Sbjct: 423 LEELINKQMQPFFRGILIFSRSWAVDLNLQEKPGVICDALLIAQNSTPILYTILREQDAE 482
Query: 59 GLKYYRMMLTVRRMELKADQLYKQKFIRGFCHLCDGQEACCVGLEAGINPSDHVITSYRA 118
G Y + +L Y K LC E+ LEA ++P D+ SY
Sbjct: 483 GQDYCTRTAFTLKQKLVNMGGYTGKVCVRAKVLCLSPESSAEALEAAVSPMDYP-ASYSL 541
Query: 119 HGVCYTRGLSVRSILAELTGRR 140
G + L ++S++ L G R
Sbjct: 542 AGTQHMEAL-LQSLVIVLLGFR 562
>gi|157388957 schlafen family member 11 [Homo sapiens]
Length = 901
Score = 30.4 bits (67), Expect = 2.8
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 9/142 (6%)
Query: 6 ISRVLRRVAQKSARRVLVASRNSSNDATFEIKK---CDLYLLEEG--PPVTTVLTR--AE 58
+ ++ + Q R +L+ SR+ + D + K CD L+ + P + T+L AE
Sbjct: 423 LEELINKQMQPFFRGILIFSRSWAVDLNLQEKPGVICDALLIAQNSTPILYTILREQDAE 482
Query: 59 GLKYYRMMLTVRRMELKADQLYKQKFIRGFCHLCDGQEACCVGLEAGINPSDHVITSYRA 118
G Y + +L Y K LC E+ LEA ++P D+ SY
Sbjct: 483 GQDYCTRTAFTLKQKLVNMGGYTGKVCVRAKVLCLSPESSAEALEAAVSPMDYP-ASYSL 541
Query: 119 HGVCYTRGLSVRSILAELTGRR 140
G + L ++S++ L G R
Sbjct: 542 AGTQHMEAL-LQSLVIVLLGFR 562
>gi|93141226 X-prolyl aminopeptidase 2, membrane-bound [Homo
sapiens]
Length = 674
Score = 29.3 bits (64), Expect = 6.3
Identities = 30/98 (30%), Positives = 41/98 (41%), Gaps = 31/98 (31%)
Query: 196 AANQGQIAEAFNMAALWKLPC-----------VFIC---------ENNL---YGMGTSTE 232
AA G++ EAF ALW F+C NN+ GM TS E
Sbjct: 496 AATSGRMVEAFARRALWDAGLNYGHGTGHGIGNFLCVHEWPVGFQSNNIAMAKGMFTSIE 555
Query: 233 RAAASPDYYKRGNFIPGLKVDGMDVLCVREATKFAANY 270
P YYK G F G++++ + L V TK+ +Y
Sbjct: 556 -----PGYYKDGEF--GIRLEDV-ALVVEAKTKYPGSY 585
>gi|50593110 5' nucleotidase, cytosolic IB isoform 1 [Homo sapiens]
Length = 610
Score = 29.3 bits (64), Expect = 6.3
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 7/63 (11%)
Query: 323 VNSKLATVEELKEIGAEVRK-------EIDDAAQFATTDPEPHLEELGHHIYSSDSSFEV 375
+ + L T GA V K EID+A A P L ++ HI+ D F +
Sbjct: 531 IRTYLVTARSAASSGARVLKTLRRWGLEIDEALFLAGAPKSPILVKIRPHIFFDDHMFHI 590
Query: 376 RGA 378
GA
Sbjct: 591 EGA 593
>gi|50593108 5' nucleotidase, cytosolic IB isoform 2 [Homo sapiens]
Length = 550
Score = 29.3 bits (64), Expect = 6.3
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 7/63 (11%)
Query: 323 VNSKLATVEELKEIGAEVRK-------EIDDAAQFATTDPEPHLEELGHHIYSSDSSFEV 375
+ + L T GA V K EID+A A P L ++ HI+ D F +
Sbjct: 471 IRTYLVTARSAASSGARVLKTLRRWGLEIDEALFLAGAPKSPILVKIRPHIFFDDHMFHI 530
Query: 376 RGA 378
GA
Sbjct: 531 EGA 533
>gi|133778974 transketolase-like 2 [Homo sapiens]
Length = 626
Score = 28.9 bits (63), Expect = 8.3
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 7/55 (12%)
Query: 167 AQGPLGAGIALAC------KYKGNDEI-CLTLYGDGAANQGQIAEAFNMAALWKL 214
A G LG G+ AC KY L GDG +++G + EAF A+ + L
Sbjct: 122 ATGSLGQGLGTACGMAYTGKYLDKASYRVFCLMGDGESSEGSVWEAFAFASHYNL 176
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.136 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,706,686
Number of Sequences: 37866
Number of extensions: 663746
Number of successful extensions: 1463
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1458
Number of HSP's gapped (non-prelim): 23
length of query: 388
length of database: 18,247,518
effective HSP length: 104
effective length of query: 284
effective length of database: 14,309,454
effective search space: 4063884936
effective search space used: 4063884936
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.