Guide to the Human Genome
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Name: PDHA2 Sequence: fasta or formatted (388aa) NCBI GI: 4885543
Description:

pyruvate dehydrogenase E1 alpha 2

Referenced in:

TCA Cycle

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0         35           3
 C cysteine            3.4         13           2
 D aspartate           4.4         17           2
 E glutamate           6.7         26           2
 F phenylalanine       3.1         12           1
 G glycine             9.5         37           2
 H histidine           2.3          9           2
 I isoleucine          5.4         21           3
 K lysine              5.9         23           2
 L leucine             8.2         32           2
 M methionine          3.1         12           2
 N asparagine          3.6         14           2
 P proline             3.4         13           2
 Q glutamine           2.8         11           1
 R arginine            7.2         28           2
 S serine              6.2         24           2
 T threonine           4.6         18           2
 V valine              5.9         23           1
 W tryptophan          0.5          2           1
 Y tyrosine            4.6         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pyruvate dehydrogenase E1 alpha 2 
PDHA1                 0.860   pyruvate dehydrogenase E1 alpha 1 precursor 
BCKDHA                0.118   branched chain keto acid dehydrogenase E1, alpha pol...
DHTKD1                0.027   dehydrogenase E1 and transketolase domain containing...
OGDH                  0.014   oxoglutarate (alpha-ketoglutarate) dehydrogenase (li...
OSBPL11               0.010   oxysterol binding protein-like 11 
CHST5                 0.009   carbohydrate (N-acetylglucosamine 6-O) sulfotransfer...
TKT                   0.009   transketolase isoform 1 
TKT                   0.009   transketolase isoform 1 
SLFN11                0.007   schlafen family member 11 
SLFN11                0.007   schlafen family member 11 
SLFN11                0.007   schlafen family member 11 
SLFN11                0.007   schlafen family member 11 
SLFN11                0.007   schlafen family member 11 
XPNPEP2               0.005   X-prolyl aminopeptidase 2, membrane-bound 
NT5C1B                0.005   5' nucleotidase, cytosolic IB isoform 1 
NT5C1B                0.005   5' nucleotidase, cytosolic IB isoform 2 
TKTL2                 0.005   transketolase-like 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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