SMC6 3161

Name: SMC6	Sequence: fasta or formatted (1091aa)		NCBI GI: 13375848
Description: SMC6 protein		Referenced in: DNases, Recombination, and DNA Repair
Other entries for this name: alt mRNA [1091aa] SMC6 protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 71 2 C cysteine 1.6 17 2 D aspartate 6.0 66 3 E glutamate 10.9 119 2 F phenylalanine 3.4 37 2 G glycine 3.8 41 2 H histidine 2.4 26 1 I isoleucine 5.9 64 2 K lysine 9.6 105 3 L leucine 9.5 104 2 M methionine 2.8 31 1 N asparagine 5.1 56 2 P proline 2.6 28 2 Q glutamine 5.8 63 2 R arginine 6.8 74 2 S serine 6.7 73 2 T threonine 3.5 38 2 V valine 4.4 48 2 W tryptophan 0.3 3 1 Y tyrosine 2.5 27 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SMC6 protein SMC6 1.000 SMC6 protein SMC5 0.056 SMC5 protein KTN1 0.036 kinectin 1 isoform a KTN1 0.036 kinectin 1 isoform a MYH7 0.035 myosin, heavy chain 7, cardiac muscle, beta KTN1 0.034 kinectin 1 isoform b MYH6 0.033 myosin heavy chain 6 KTN1 0.033 kinectin 1 isoform c MYH8 0.032 myosin, heavy chain 8, skeletal muscle, perinatal [... MYH11 0.030 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.030 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.030 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.030 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... MYH4 0.029 myosin, heavy polypeptide 4, skeletal muscle SMC3 0.029 structural maintenance of chromosomes 3 SMC4 0.029 SMC4 structural maintenance of chromosomes 4-like 1 ... SMC4 0.029 SMC4 structural maintenance of chromosomes 4-like 1 ... MYH1 0.029 myosin, heavy chain 1, skeletal muscle, adult [Homo... GOLGA4 0.027 golgi autoantigen, golgin subfamily a, 4 GOLGA3 0.027 Golgi autoantigen, golgin subfamily a, 3 EEA1 0.026 early endosome antigen 1, 162kD SMC1A 0.026 structural maintenance of chromosomes 1A CCDC46 0.025 coiled-coil domain containing 46 isoform a ROCK2 0.024 Rho-associated, coiled-coil containing protein kinas... SYCP1 0.024 synaptonemal complex protein 1 MYH9 0.024 myosin, heavy polypeptide 9, non-muscle AKAP9 0.024 A-kinase anchor protein 9 isoform 2 AKAP9 0.024 A-kinase anchor protein 9 isoform 3 ROCK1 0.024 Rho-associated, coiled-coil containing protein kinase... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.