Guide to the Human Genome
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Name: UGP2 Sequence: fasta or formatted (497aa) NCBI GI: 48255968
Description:

UDP-glucose pyrophosphorylase 2 isoform b

Referenced in:

Glycogen

Other entries for this name:
alt prot [508aa] UDP-glucose pyrophosphorylase 2 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0         20           2
 C cysteine            0.6          3           1
 D aspartate           5.4         27           1
 E glutamate           6.4         32           1
 F phenylalanine       4.2         21           1
 G glycine             6.8         34           2
 H histidine           2.2         11           1
 I isoleucine          6.6         33           3
 K lysine              8.0         40           2
 L leucine            10.9         54           3
 M methionine          1.8          9           1
 N asparagine          6.8         34           2
 P proline             4.2         21           2
 Q glutamine           3.4         17           2
 R arginine            4.0         20           2
 S serine              7.2         36           2
 T threonine           5.8         29           2
 V valine              7.8         39           3
 W tryptophan          0.6          3           1
 Y tyrosine            2.8         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   UDP-glucose pyrophosphorylase 2 isoform b 
UGP2                  1.000   UDP-glucose pyrophosphorylase 2 isoform a 
UAP1                  0.031   UDP-N-acetylglucosamine pyrophosphorylase 1 
UAP1L1                0.025   UDP-N-acteylglucosamine pyrophosphorylase 1-like 1 ...
MDN1                  0.008   MDN1, midasin homolog 
TUBGCP2               0.007   tubulin, gamma complex associated protein 2 
ITIH2                 0.005   inter-alpha globulin inhibitor H2 polypeptide 
LOC729920             0.005   notch1-induced protein isoform a 
LOC729920             0.005   notch1-induced protein isoform b 
COL14A1               0.005   collagen, type XIV, alpha 1 
EXTL3                 0.005   exostoses-like 3 
TLR5                  0.004   toll-like receptor 5 
DCDC5                 0.004   PREDICTED: doublecortin domain containing 5 
DCDC5                 0.004   PREDICTED: doublecortin domain containing 5 
DCDC5                 0.004   PREDICTED: doublecortin domain containing 5 
LOXHD1                0.004   lipoxygenase homology domains 1 isoform 1 
MTHFS                 0.004   5,10-methenyltetrahydrofolate synthetase (5-formyltet...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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