Guide to the Human Genome
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Name: UAP1L1 Sequence: fasta or formatted (507aa) NCBI GI: 187936958
Description:

UDP-N-acteylglucosamine pyrophosphorylase 1-like 1

Referenced in:

N-Acetyl Sugars and Hyaluronan

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9         50           2
 C cysteine            2.0         10           1
 D aspartate           4.3         22           1
 E glutamate           9.9         50           3
 F phenylalanine       4.7         24           2
 G glycine             6.7         34           2
 H histidine           2.4         12           1
 I isoleucine          2.4         12           1
 K lysine              3.7         19           2
 L leucine            11.2         57           3
 M methionine          1.4          7           1
 N asparagine          2.6         13           1
 P proline             7.9         40           3
 Q glutamine           3.9         20           1
 R arginine            8.9         45           3
 S serine              3.6         18           1
 T threonine           3.0         15           1
 V valine              8.1         41           2
 W tryptophan          1.0          5           1
 Y tyrosine            2.6         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   UDP-N-acteylglucosamine pyrophosphorylase 1-like 1 ... 
UAP1                  0.555   UDP-N-acetylglucosamine pyrophosphorylase 1 
UGP2                  0.024   UDP-glucose pyrophosphorylase 2 isoform b 
UGP2                  0.024   UDP-glucose pyrophosphorylase 2 isoform a 
AEBP2                 0.011   AE binding protein 2 isoform b 
AEBP2                 0.011   AE binding protein 2 isoform a 
TNRC18                0.010   trinucleotide repeat containing 18 
LOC100130174          0.008   PREDICTED: hypothetical protein 
LOC100130174          0.008   PREDICTED: hypothetical protein 
ARHGEF18              0.007   Rho/Rac guanine nucleotide exchange factor 18 isofo...
ARHGEF18              0.007   Rho/Rac guanine nucleotide exchange factor 18 isofor...
MAGED2                0.007   melanoma antigen family D, 2 
MAGED2                0.007   melanoma antigen family D, 2 
MAGED2                0.007   melanoma antigen family D, 2 
LOC730429             0.006   PREDICTED: similar to ubiquitin protein ligase E3 c...
KCNA5                 0.006   potassium voltage-gated channel, shaker-related subf...
UBR5                  0.006   ubiquitin protein ligase E3 component n-recognin 5 [...
CHD7                  0.006   chromodomain helicase DNA binding protein 7 
SPEG                  0.006   SPEG complex locus 
DPPA4                 0.006   developmental pluripotency associated 4 
DTX1                  0.006   deltex homolog 1 
DNM1                  0.005   dynamin 1 isoform 1 
SAMD1                 0.005   sterile alpha motif domain containing 1 
SSH1                  0.005   slingshot 1 isoform 1 
EIF2AK3               0.005   eukaryotic translation initiation factor 2-alpha ki...
SYNE2                 0.005   spectrin repeat containing, nuclear envelope 2 isof...
SYNE2                 0.005   spectrin repeat containing, nuclear envelope 2 isof...
FBXL19                0.005   F-box and leucine-rich repeat protein 19 
LOC100293114          0.004   PREDICTED: hypothetical protein 
LOC100292120          0.004   PREDICTED: hypothetical protein XP_002346164 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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