Search of human proteins with 4758980

Search of human proteins with 4758980

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4758980 pituitary tumor-transforming protein 1 [Homo
sapiens]
         (202 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4758980 pituitary tumor-transforming protein 1 [Homo sapiens]      407   e-114
gi|154354976 pituitary tumor-transforming 2 [Homo sapiens]            314   4e-86
gi|31652242 transcription factor 20 isoform 2 [Homo sapiens]           37   0.011
gi|31652244 transcription factor 20 isoform 1 [Homo sapiens]           37   0.011
gi|167466272 cytoskeleton associated protein 2-like [Homo sapiens]     35   0.057
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [...    33   0.16 
gi|213385323 anaphase-promoting complex subunit 5 isoform b [Hom...    32   0.48 
gi|20127553 anaphase-promoting complex subunit 5 isoform a [Homo...    32   0.48 
gi|117938768 GNAS complex locus alex [Homo sapiens]                    31   0.63 
gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo ...    31   0.63 
gi|156104862 ankyrin repeat domain 38 [Homo sapiens]                   31   0.63 
gi|27735067 hypothetical protein LOC126353 [Homo sapiens]              31   0.82 
gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [H...    30   1.1  
gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f...    30   1.1  
gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e...    30   1.1  
gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d...    30   1.1  
gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b ...    30   1.1  
gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a ...    30   1.1  
gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c ...    30   1.1  
gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens]    30   1.1  
gi|18959210 WIRE protein [Homo sapiens]                                30   1.1  
gi|148727245 thioredoxin domain-containing 2 isoform 1 [Homo sap...    30   1.4  
gi|148727319 thioredoxin domain-containing 2 isoform 2 [Homo sap...    30   1.4  
gi|42516570 thioredoxin domain-containing 2 isoform 1 [Homo sapi...    30   1.4  
gi|46049063 exportin 6 [Homo sapiens]                                  30   1.4  
gi|26051278 nuclear pore membrane protein 121 [Homo sapiens]           30   1.4  
gi|223633988 hypothetical protein LOC85379 [Homo sapiens]              30   1.8  
gi|239747180 PREDICTED: hypothetical protein XP_002343933 [Homo ...    30   1.8  
gi|151301137 AT-hook transcription factor [Homo sapiens]               30   1.8  
gi|109134330 PHD finger protein 20-like 1 isoform 2 [Homo sapiens]     29   3.1  

>gi|4758980 pituitary tumor-transforming protein 1 [Homo sapiens]
          Length = 202

 Score =  407 bits (1045), Expect = e-114
 Identities = 202/202 (100%), Positives = 202/202 (100%)

Query: 1   MATLIYVDKENGEPGTRVVAKDGLKLGSGPSIKALDGRSQVSTPRFGKTFDAPPALPKAT 60
           MATLIYVDKENGEPGTRVVAKDGLKLGSGPSIKALDGRSQVSTPRFGKTFDAPPALPKAT
Sbjct: 1   MATLIYVDKENGEPGTRVVAKDGLKLGSGPSIKALDGRSQVSTPRFGKTFDAPPALPKAT 60

Query: 61  RKALGTVNRATEKSVKTKGPLKQKQPSFSAKKMTEKTVKAKSSVPASDDAYPEIEKFFPF 120
           RKALGTVNRATEKSVKTKGPLKQKQPSFSAKKMTEKTVKAKSSVPASDDAYPEIEKFFPF
Sbjct: 61  RKALGTVNRATEKSVKTKGPLKQKQPSFSAKKMTEKTVKAKSSVPASDDAYPEIEKFFPF 120

Query: 121 NPLDFESFDLPEEHQIAHLPLSGVPLMILDEERELEKLFQLGPPSPVKMPSPPWESNLLQ 180
           NPLDFESFDLPEEHQIAHLPLSGVPLMILDEERELEKLFQLGPPSPVKMPSPPWESNLLQ
Sbjct: 121 NPLDFESFDLPEEHQIAHLPLSGVPLMILDEERELEKLFQLGPPSPVKMPSPPWESNLLQ 180

Query: 181 SPSSILSTLDVELPPVCCDIDI 202
           SPSSILSTLDVELPPVCCDIDI
Sbjct: 181 SPSSILSTLDVELPPVCCDIDI 202


>gi|154354976 pituitary tumor-transforming 2 [Homo sapiens]
          Length = 191

 Score =  314 bits (804), Expect = 4e-86
 Identities = 161/178 (90%), Positives = 162/178 (91%)

Query: 1   MATLIYVDKENGEPGTRVVAKDGLKLGSGPSIKALDGRSQVSTPRFGKTFDAPPALPKAT 60
           MATLIYVDKE GEPGTRV AKD LKL S PSIKALDG SQV T RFGKT+DAP ALPKAT
Sbjct: 1   MATLIYVDKEIGEPGTRVAAKDVLKLESRPSIKALDGISQVLTRRFGKTYDAPSALPKAT 60

Query: 61  RKALGTVNRATEKSVKTKGPLKQKQPSFSAKKMTEKTVKAKSSVPASDDAYPEIEKFFPF 120
           RKALGTVNRATEKSVKT GP KQKQPSFSAKKMTEKTVK KSSVPASDDAYPEIEKFFPF
Sbjct: 61  RKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDAYPEIEKFFPF 120

Query: 121 NPLDFESFDLPEEHQIAHLPLSGVPLMILDEERELEKLFQLGPPSPVKMPSPPWESNL 178
           N LDFESFDLPEE QIAHLPLSGVPLMILDEE ELEKLFQLGPPSPVKMPSPPWE NL
Sbjct: 121 NLLDFESFDLPEERQIAHLPLSGVPLMILDEEGELEKLFQLGPPSPVKMPSPPWECNL 178


>gi|31652242 transcription factor 20 isoform 2 [Homo sapiens]
          Length = 1938

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 48/179 (26%), Positives = 72/179 (40%), Gaps = 30/179 (16%)

Query: 37   GRSQVSTPRFGKTFDAPPALPKATRKALGTVNRATEKSVKTKGPLKQKQPSFSAKKMTEK 96
            GR   S  +  K    PP  P+  +   G+ +    K  K +   ++++P    +K    
Sbjct: 1541 GRPIGSVNKQKKQQQPPPPPPQPPQIPEGSAD-GEPKPKKQRQRRERRKPGAQPRKR--- 1596

Query: 97   TVKAKSSVPASDDAYPEIEKFFPFNPLD-----FESFDLPEEHQIAHLPLSGVPLMILDE 151
              K K +VP  +   PEI+  +   PLD      +SF  P  H +    L  V  +I  E
Sbjct: 1597 --KTKQAVPIVEPQEPEIKLKYATQPLDKTDAKNKSF-YPYIHVVNKCELGAVCTIINAE 1653

Query: 152  ERELEKLFQ--------LGPPSPVKMPSPPWESNLLQSP----SSILSTLDVELPPVCC 198
            E E  KL +          PPS  +  + P  S +LQ P    SS++  L      VCC
Sbjct: 1654 EEEQTKLVRGRKGQRSLTPPPSSTESKALPASSFMLQGPVVTESSVMGHL------VCC 1706



 Score = 28.9 bits (63), Expect = 3.1
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 94   TEKTV-KAKSSVPASDDAYPEIEKFFPFNPLDFESF 128
            +EKTV  +K SVP + +  PE+E   P  PLD   F
Sbjct: 1817 SEKTVLDSKPSVPTTSEGGPELELQIPELPLDSNEF 1852


>gi|31652244 transcription factor 20 isoform 1 [Homo sapiens]
          Length = 1960

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 48/179 (26%), Positives = 72/179 (40%), Gaps = 30/179 (16%)

Query: 37   GRSQVSTPRFGKTFDAPPALPKATRKALGTVNRATEKSVKTKGPLKQKQPSFSAKKMTEK 96
            GR   S  +  K    PP  P+  +   G+ +    K  K +   ++++P    +K    
Sbjct: 1541 GRPIGSVNKQKKQQQPPPPPPQPPQIPEGSAD-GEPKPKKQRQRRERRKPGAQPRKR--- 1596

Query: 97   TVKAKSSVPASDDAYPEIEKFFPFNPLD-----FESFDLPEEHQIAHLPLSGVPLMILDE 151
              K K +VP  +   PEI+  +   PLD      +SF  P  H +    L  V  +I  E
Sbjct: 1597 --KTKQAVPIVEPQEPEIKLKYATQPLDKTDAKNKSF-YPYIHVVNKCELGAVCTIINAE 1653

Query: 152  ERELEKLFQ--------LGPPSPVKMPSPPWESNLLQSP----SSILSTLDVELPPVCC 198
            E E  KL +          PPS  +  + P  S +LQ P    SS++  L      VCC
Sbjct: 1654 EEEQTKLVRGRKGQRSLTPPPSSTESKALPASSFMLQGPVVTESSVMGHL------VCC 1706



 Score = 28.9 bits (63), Expect = 3.1
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 94   TEKTV-KAKSSVPASDDAYPEIEKFFPFNPLDFESF 128
            +EKTV  +K SVP + +  PE+E   P  PLD   F
Sbjct: 1817 SEKTVLDSKPSVPTTSEGGPELELQIPELPLDSNEF 1852


>gi|167466272 cytoskeleton associated protein 2-like [Homo sapiens]
          Length = 745

 Score = 34.7 bits (78), Expect = 0.057
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 8/82 (9%)

Query: 47  GKTFDAPPALPKATRKALGTVNRATEKSVKTKGPLKQKQPSFSAK---KMTEKTVKAKSS 103
           GKT+  PP   K  RK +  +N +  KS++ +   K+ Q   S+K    +TE     +  
Sbjct: 476 GKTYKRPPMELKTKRKVIKEMNISFWKSIEKEEEEKKAQLELSSKINNTLTECLNLIEGG 535

Query: 104 VPASD-----DAYPEIEKFFPF 120
           VP+++      + PE EKF  F
Sbjct: 536 VPSNEILNILSSIPEAEKFAKF 557


>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [Homo
            sapiens]
          Length = 3969

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 34/128 (26%), Positives = 52/128 (40%), Gaps = 16/128 (12%)

Query: 25   KLGSGPSIKALDGRSQVSTPRFGKTFDAPPALPKATRKALGTVNRATEKSVKTKGPLKQK 84
            K G   S + LD  S      F +T DAP ++     KAL +  +A+  S          
Sbjct: 3462 KTGIHSSQRDLDSASGPQVSNFTQTVDAPNSMGLEQNKALSSAVQASPTS---------- 3511

Query: 85   QPSFSAKKMTEKTVKAKSSVPASDDAYPEIEKFFPFNPLDFESFDLPEEHQIAHLPLSGV 144
             P  S    +     A  SVP      P+ ++F    PLD  +    ++H+++HL  S  
Sbjct: 3512 -PGGSPSSPSSGQRSASPSVPGPTKPKPKTKRF--QLPLDKGN---GKKHKVSHLRTSSS 3565

Query: 145  PLMILDEE 152
               I D+E
Sbjct: 3566 EAHIPDQE 3573


>gi|213385323 anaphase-promoting complex subunit 5 isoform b [Homo
           sapiens]
          Length = 643

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 10/70 (14%)

Query: 72  EKSVKTKGPLKQKQPSF--SAKKMTEKTVKAKSSVPASDDAYPEIEKFFPFNPLDFESFD 129
           E+ V   GPL QKQ  F  S +    K  + K+  PAS     E+     FNP      D
Sbjct: 99  EEEVSCSGPLSQKQAEFFLSQQASLLKNDETKALTPAS--LQKELNNLLKFNP------D 150

Query: 130 LPEEHQIAHL 139
             E H +++L
Sbjct: 151 FAEAHYLSYL 160


>gi|20127553 anaphase-promoting complex subunit 5 isoform a [Homo
           sapiens]
          Length = 755

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 10/70 (14%)

Query: 72  EKSVKTKGPLKQKQPSF--SAKKMTEKTVKAKSSVPASDDAYPEIEKFFPFNPLDFESFD 129
           E+ V   GPL QKQ  F  S +    K  + K+  PAS     E+     FNP      D
Sbjct: 198 EEEVSCSGPLSQKQAEFFLSQQASLLKNDETKALTPAS--LQKELNNLLKFNP------D 249

Query: 130 LPEEHQIAHL 139
             E H +++L
Sbjct: 250 FAEAHYLSYL 259


>gi|117938768 GNAS complex locus alex [Homo sapiens]
          Length = 626

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 33/178 (18%), Positives = 67/178 (37%), Gaps = 19/178 (10%)

Query: 28  SGPSIKALDGRSQVSTPRFGKTFDAPPALPKATRKALGTVNRATEKSVKTKGPLKQKQPS 87
           + P  ++ D RS+++ P  G T   P        +     +R+ E  ++     +Q+ P 
Sbjct: 236 AAPGWRSPDPRSRLAAPPLGST-TLPSTWTAPQSRLTARPSRSPEPQIRES---EQRDPQ 291

Query: 88  FSAKKMTEKTVKAKSSVPASDDAYP----------EIEKF-FPFNPLDFESFDLPEEHQI 136
              K+   K    +  +P  ++ YP          + ++   P  PL  +    P + Q 
Sbjct: 292 LRRKQQRWK----EPLMPRREEKYPLRGTDPLPPGQPQRIPLPGQPLQPQPILTPGQPQK 347

Query: 137 AHLPLSGVPLMILDEERELEKLFQLGPPSPVKMPSPPWESNLLQSPSSILSTLDVELP 194
              P    P++     + +    Q  PP P+  P  P     + +P   L+   +++P
Sbjct: 348 IPTPGQHQPILTPGHSQPIPTPGQPLPPQPIPTPGRPLTPQPIPTPGRPLTPQPIQMP 405


>gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo
           sapiens]
          Length = 834

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 6/125 (4%)

Query: 52  APPALPKATRKALGTVN-RATEKSVKTKGPLKQKQPSFSAKKMTEKTVKAKSSVPASDDA 110
           AP  +P    KA  T+    T K   T  P    + SF     T+ T  +  + PA+  A
Sbjct: 251 APSMVPATDTKAPPTLQAETTTKPQATSAPSPAPKQSFLFG--TQNTSPSSPAAPAASSA 308

Query: 111 YPEIEKFFPFNPLDFESFDLPEEHQIAHLP--LSGVPLMILDEERELEKLFQ-LGPPSPV 167
            P  +  F   P   +    P    ++      S +P          + +F  +GPP+ V
Sbjct: 309 SPMFKPIFTAPPKSEKEGPTPPGPSVSATAPSSSSLPTTTSTTAPTFQPVFSSMGPPASV 368

Query: 168 KMPSP 172
            +P+P
Sbjct: 369 PLPAP 373


>gi|156104862 ankyrin repeat domain 38 [Homo sapiens]
          Length = 995

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 14/77 (18%)

Query: 138 HLPLSGVP------LMILDEE------RELEKLFQLG--PPSPVKMPSPPWESNLLQSPS 183
           HLPL G P      L++L+++      RE E LF  G   PSP  +PSP  E+ LL    
Sbjct: 244 HLPLPGPPFSFQNVLVVLEDKEDEHNAREAEVLFTPGSPTPSPPPLPSPIPENELLLEEI 303

Query: 184 SILSTLDVELPPVCCDI 200
            +  +     PPV  D+
Sbjct: 304 ELNISEIPPPPPVEVDM 320


>gi|27735067 hypothetical protein LOC126353 [Homo sapiens]
          Length = 679

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 33/165 (20%), Positives = 59/165 (35%), Gaps = 16/165 (9%)

Query: 10  ENGEPGTRVVAKDGLKLGSGPSIKALDGRSQV-STPRFGKTFDAP---PALPKATRKALG 65
           E  +PG R        L   P  +A D   +V    R       P   P  P+    A G
Sbjct: 383 EGPQPGLRRALSSDSILSPAPDARAADPAPEVRKVNRIPPDAYQPYLSPGTPQLEFSAFG 442

Query: 66  TVNRATEKSVKTKGPLKQKQPSFSAKKMTE---KTVKAKSSVPASDDAYPEIEK------ 116
              + +  S          + + S + ++E   K +  K          P+  +      
Sbjct: 443 AFGKPSSLSTAEAKAATSPKATMSPRHLSESSGKPLSTKQEASKPPRGCPQANRGVVRWE 502

Query: 117 FFPFNPLDFESFDLPEEHQIAHL---PLSGVPLMILDEERELEKL 158
           +F   PL F + D P++ Q+ H+    ++G P + L + +  + L
Sbjct: 503 YFRLRPLRFRAPDEPQQAQVPHVWGWEVAGAPALRLQKSQSSDLL 547


>gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [Homo
           sapiens]
          Length = 1251

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 19/114 (16%)

Query: 90  AKKMTEKTVKAKSSVPASDDAYPEIEKFFPFNPLDF-ESFDLPEEHQIAHLPLSGVPLMI 148
           AKK  E+  K ++   A ++A  E        P D+ E+ + PE    A    SGVP   
Sbjct: 413 AKKEAEEKAKEEAEEVAEEEAEKE--------PQDWAETKEEPEAE--AEAASSGVPATK 462

Query: 149 LDEERELEK--------LFQLGPPSPVKMPSPPWESNLLQSPSSILSTLDVELP 194
              E ++E         + +  PPS V  P  P +S+ L  PSS   T   +LP
Sbjct: 463 QHPEVQVEDTDADSCPLMAEENPPSTVLPPPSPAKSDTLIVPSSASGTHRKKLP 516


>gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f
           [Homo sapiens]
          Length = 1412

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/63 (30%), Positives = 30/63 (47%)

Query: 51  DAPPALPKATRKALGTVNRATEKSVKTKGPLKQKQPSFSAKKMTEKTVKAKSSVPASDDA 110
           + P A+  A  K+LG + +A   S   KGP ++  P     K  +    ++SS  +SD A
Sbjct: 482 EVPTAVAPAQEKSLGNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSA 541

Query: 111 YPE 113
             E
Sbjct: 542 DSE 544


>gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e
           [Homo sapiens]
          Length = 1451

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/63 (30%), Positives = 30/63 (47%)

Query: 51  DAPPALPKATRKALGTVNRATEKSVKTKGPLKQKQPSFSAKKMTEKTVKAKSSVPASDDA 110
           + P A+  A  K+LG + +A   S   KGP ++  P     K  +    ++SS  +SD A
Sbjct: 559 EVPTAVAPAQEKSLGNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSA 618

Query: 111 YPE 113
             E
Sbjct: 619 DSE 621


>gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d
           [Homo sapiens]
          Length = 1488

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/63 (30%), Positives = 30/63 (47%)

Query: 51  DAPPALPKATRKALGTVNRATEKSVKTKGPLKQKQPSFSAKKMTEKTVKAKSSVPASDDA 110
           + P A+  A  K+LG + +A   S   KGP ++  P     K  +    ++SS  +SD A
Sbjct: 559 EVPTAVAPAQEKSLGNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSA 618

Query: 111 YPE 113
             E
Sbjct: 619 DSE 621


>gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b
           [Homo sapiens]
          Length = 1411

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/63 (30%), Positives = 30/63 (47%)

Query: 51  DAPPALPKATRKALGTVNRATEKSVKTKGPLKQKQPSFSAKKMTEKTVKAKSSVPASDDA 110
           + P A+  A  K+LG + +A   S   KGP ++  P     K  +    ++SS  +SD A
Sbjct: 482 EVPTAVAPAQEKSLGNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSA 541

Query: 111 YPE 113
             E
Sbjct: 542 DSE 544


>gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a
           [Homo sapiens]
          Length = 1450

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/63 (30%), Positives = 30/63 (47%)

Query: 51  DAPPALPKATRKALGTVNRATEKSVKTKGPLKQKQPSFSAKKMTEKTVKAKSSVPASDDA 110
           + P A+  A  K+LG + +A   S   KGP ++  P     K  +    ++SS  +SD A
Sbjct: 559 EVPTAVAPAQEKSLGNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSA 618

Query: 111 YPE 113
             E
Sbjct: 619 DSE 621


>gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c
           [Homo sapiens]
          Length = 958

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/63 (30%), Positives = 30/63 (47%)

Query: 51  DAPPALPKATRKALGTVNRATEKSVKTKGPLKQKQPSFSAKKMTEKTVKAKSSVPASDDA 110
           + P A+  A  K+LG + +A   S   KGP ++  P     K  +    ++SS  +SD A
Sbjct: 559 EVPTAVAPAQEKSLGNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSA 618

Query: 111 YPE 113
             E
Sbjct: 619 DSE 621


>gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens]
          Length = 987

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 32/125 (25%), Positives = 49/125 (39%), Gaps = 6/125 (4%)

Query: 52  APPALPKATRKALGTVNRATE-KSVKTKGPLKQKQPSFSAKKMTEKTVKAKSSVPASDDA 110
           AP  +P    KA  T+   T  K   T  P    + SF     T+ T  +  + PA+  A
Sbjct: 402 APSMVPATDTKAPPTLQAETATKPQATSAPSPAPKQSFLFG--TQNTSPSSPAAPAASSA 459

Query: 111 YPEIEKFFPFNPLDFESFDLPEEHQI-AHLPLSG-VPLMILDEERELEKLFQ-LGPPSPV 167
            P  +  F   P   +    P    + A  P S  +P          + +F  +GPP+ V
Sbjct: 460 SPMFKPIFTAPPKSEKEGPTPPGPSVTATAPSSSSLPTTTSTTAPTFQPVFSSMGPPASV 519

Query: 168 KMPSP 172
            +P+P
Sbjct: 520 PLPAP 524


>gi|18959210 WIRE protein [Homo sapiens]
          Length = 440

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 43/168 (25%), Positives = 59/168 (35%), Gaps = 23/168 (13%)

Query: 18  VVAKDGLK-LGSGPSIKALDGRSQVSTPRFGKTFDAPPALPKATRKALGTVNRATEKSVK 76
           V AKDG + L   P+++    R+    P        P     ++R +L  + R    S+ 
Sbjct: 98  VGAKDGSENLAGKPALQIPSSRAAAPRPPVSAASGRPQDDTDSSRASLPELPRMQRPSL- 156

Query: 77  TKGPLKQKQPSFSAKKMTEKT-VKAKSSVPASDDAYPEIEKFFPFNPLDFESFDLPEEHQ 135
                    P  S    T  T +K  SS P      P      P  PL   S   P  ++
Sbjct: 157 ---------PDLSRPNTTSSTGMKHSSSAPPPPP--PGRRANAPPTPLPMHSSKAPAYNR 205

Query: 136 IAHLPLSGVPLMILDEERELEKLFQLGPPSPVKMPSPPWESNLLQSPS 183
               PL   P   L   RE       GPP+P  +  PP   N+   PS
Sbjct: 206 --EKPLPPTPGQRLHPGRE-------GPPAPPPVKPPPSPVNIRTGPS 244


>gi|148727245 thioredoxin domain-containing 2 isoform 1 [Homo
           sapiens]
          Length = 486

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 14/151 (9%)

Query: 48  KTFDAPPALPKATRKALGTVNRATEKSVKTKGPLKQKQPSFSAKKMTEKTVKA-KSSVPA 106
           K  D P A  +  +     + +++EK+++   P +   P  SAK +  K     K+SV  
Sbjct: 48  KEGDIPKAPEETIQSKKEDLPKSSEKAIQ---PKESNIPKSSAKPIQPKLGNIPKASVKP 104

Query: 107 SDDAYPEIEKFFPFNPLDFESFDLPEEHQIAHLPLSGVPLMILDEERELEKLFQ--LGPP 164
           S     +I K  P   +  +  DLP+  + A  P  G      D  +   K  Q  LG  
Sbjct: 105 SQPKEGDIPKA-PEETIQSKKEDLPKSSEEAIQPKEG------DIPKSSAKPIQPKLGNI 157

Query: 165 SPVKM-PSPPWESNLLQSPSSILSTLDVELP 194
           +   + PS P ES++ +SP   +   + ++P
Sbjct: 158 AKTSVKPSQPKESDIPKSPEETIQPKEGDIP 188


>gi|148727319 thioredoxin domain-containing 2 isoform 2 [Homo
           sapiens]
          Length = 553

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 14/151 (9%)

Query: 48  KTFDAPPALPKATRKALGTVNRATEKSVKTKGPLKQKQPSFSAKKMTEKTVKA-KSSVPA 106
           K  D P A  +  +     + +++EK+++   P +   P  SAK +  K     K+SV  
Sbjct: 115 KEGDIPKAPEETIQSKKEDLPKSSEKAIQ---PKESNIPKSSAKPIQPKLGNIPKASVKP 171

Query: 107 SDDAYPEIEKFFPFNPLDFESFDLPEEHQIAHLPLSGVPLMILDEERELEKLFQ--LGPP 164
           S     +I K  P   +  +  DLP+  + A  P  G      D  +   K  Q  LG  
Sbjct: 172 SQPKEGDIPKA-PEETIQSKKEDLPKSSEEAIQPKEG------DIPKSSAKPIQPKLGNI 224

Query: 165 SPVKM-PSPPWESNLLQSPSSILSTLDVELP 194
           +   + PS P ES++ +SP   +   + ++P
Sbjct: 225 AKTSVKPSQPKESDIPKSPEETIQPKEGDIP 255


>gi|42516570 thioredoxin domain-containing 2 isoform 1 [Homo
           sapiens]
          Length = 486

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 14/151 (9%)

Query: 48  KTFDAPPALPKATRKALGTVNRATEKSVKTKGPLKQKQPSFSAKKMTEKTVKA-KSSVPA 106
           K  D P A  +  +     + +++EK+++   P +   P  SAK +  K     K+SV  
Sbjct: 48  KEGDIPKAPEETIQSKKEDLPKSSEKAIQ---PKESNIPKSSAKPIQPKLGNIPKASVKP 104

Query: 107 SDDAYPEIEKFFPFNPLDFESFDLPEEHQIAHLPLSGVPLMILDEERELEKLFQ--LGPP 164
           S     +I K  P   +  +  DLP+  + A  P  G      D  +   K  Q  LG  
Sbjct: 105 SQPKEGDIPKA-PEETIQSKKEDLPKSSEEAIQPKEG------DIPKSSAKPIQPKLGNI 157

Query: 165 SPVKM-PSPPWESNLLQSPSSILSTLDVELP 194
           +   + PS P ES++ +SP   +   + ++P
Sbjct: 158 AKTSVKPSQPKESDIPKSPEETIQPKEGDIP 188


>gi|46049063 exportin 6 [Homo sapiens]
          Length = 1125

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 19/41 (46%), Positives = 21/41 (51%), Gaps = 6/41 (14%)

Query: 163 PPSPVKMPSPPWESNLLQSPSSI------LSTLDVELPPVC 197
           PPSP    S    SNLLQSPSS       +  LDVE   +C
Sbjct: 206 PPSPTSGESGDLLSNLLQSPSSAKLLNQPIPILDVESEYIC 246


>gi|26051278 nuclear pore membrane protein 121 [Homo sapiens]
          Length = 984

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 32/125 (25%), Positives = 49/125 (39%), Gaps = 6/125 (4%)

Query: 52  APPALPKATRKALGTVNRATE-KSVKTKGPLKQKQPSFSAKKMTEKTVKAKSSVPASDDA 110
           AP  +P    KA  T+   T  K   T  P    + SF     T+ T  +  + PA+  A
Sbjct: 402 APSMVPATDTKAPPTLQAETATKPQATSAPSPAPKQSFLFG--TQNTSPSSPAAPAASSA 459

Query: 111 YPEIEKFFPFNPLDFESFDLPEEHQI-AHLPLSG-VPLMILDEERELEKLFQ-LGPPSPV 167
            P  +  F   P   +    P    + A  P S  +P          + +F  +GPP+ V
Sbjct: 460 PPMFKPIFTAPPKSEKEGPTPPGPSVTATAPSSSSLPTTTSTTAPTFQPVFSSMGPPASV 519

Query: 168 KMPSP 172
            +P+P
Sbjct: 520 PLPAP 524


>gi|223633988 hypothetical protein LOC85379 [Homo sapiens]
          Length = 1806

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 4/65 (6%)

Query: 21  KDGLKLGSGPSIKALDGRSQVSTPRFGKTFDAPPALPKATRKALGTVNRATEKSVKTKGP 80
           K G  LG   S  A + +  VS  R      A PALP  T+K  GT+ R+   S  TK P
Sbjct: 151 KSGPALGKAVSEGAEEAKLGVSGSR--PEVAAKPALP--TQKPAGTLPRSAPLSQDTKPP 206

Query: 81  LKQKQ 85
           + Q++
Sbjct: 207 VPQEE 211


>gi|239747180 PREDICTED: hypothetical protein XP_002343933 [Homo
           sapiens]
          Length = 1595

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 4/65 (6%)

Query: 21  KDGLKLGSGPSIKALDGRSQVSTPRFGKTFDAPPALPKATRKALGTVNRATEKSVKTKGP 80
           K G  LG   S  A + +  VS  R      A PALP  T+K  GT+ R+   S  TK P
Sbjct: 151 KSGPALGKAVSEGAEEAKLGVSGSR--PEVAAKPALP--TQKPAGTLPRSAPLSQDTKPP 206

Query: 81  LKQKQ 85
           + Q++
Sbjct: 207 VPQEE 211


>gi|151301137 AT-hook transcription factor [Homo sapiens]
          Length = 1439

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 22/77 (28%)

Query: 42   STPRFGKTFDAPPALPKATRKALGTVNRATEKSV----------KTKGPLKQKQPSFSAK 91
            S PR G ++      PKA    +    RATE S              GPL+Q+ P+FS  
Sbjct: 961  SVPRDGASY------PKARGSLIP--RRATEPSTPRSQAQRYLSSPSGPLRQRAPNFS-- 1010

Query: 92   KMTEKTVKAKSSVPASD 108
               E+T+ A+ +VP S+
Sbjct: 1011 --LERTLAAEMAVPGSE 1025


>gi|109134330 PHD finger protein 20-like 1 isoform 2 [Homo sapiens]
          Length = 573

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 10/90 (11%)

Query: 99  KAKSSVPASDDAYPEIEKFFPFNPLDFESFDLPEEHQIAHLPLSGV-PLMILDEERELEK 157
           K  S  PA+D       K F  +  + +   +PE   +AHLPL  + P + LD  R  E 
Sbjct: 430 KVSSPSPATDG------KVFSISSQNQQESSVPEVPDVAHLPLEKLGPCLPLDLSRGSEV 483

Query: 158 LFQLGPPSPVKMPSPPWE---SNLLQSPSS 184
              +   S  +   P  E   + +L +PSS
Sbjct: 484 TAPVASDSSYRNECPRAEKEDTQMLPNPSS 513


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.132    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,976,498
Number of Sequences: 37866
Number of extensions: 443382
Number of successful extensions: 1638
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 1591
Number of HSP's gapped (non-prelim): 97
length of query: 202
length of database: 18,247,518
effective HSP length: 97
effective length of query: 105
effective length of database: 14,574,516
effective search space: 1530324180
effective search space used: 1530324180
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.