Guide to the Human Genome
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Name: ANAPC5 Sequence: fasta or formatted (755aa) NCBI GI: 20127553
Description:

anaphase-promoting complex subunit 5 isoform a

Referenced in:

Anaphase-promoting Complex

Other entries for this name:
alt prot [643aa] anaphase-promoting complex subunit 5 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         74           3
 C cysteine            1.6         12           1
 D aspartate           3.8         29           2
 E glutamate           7.3         55           3
 F phenylalanine       3.6         27           2
 G glycine             4.1         31           1
 H histidine           3.6         27           1
 I isoleucine          3.7         28           1
 K lysine              6.0         45           2
 L leucine            15.1        114           3
 M methionine          2.9         22           2
 N asparagine          4.2         32           2
 P proline             2.5         19           2
 Q glutamine           6.6         50           2
 R arginine            4.1         31           3
 S serine              7.9         60           3
 T threonine           3.2         24           1
 V valine              5.8         44           2
 W tryptophan          0.8          6           1
 Y tyrosine            3.3         25           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   anaphase-promoting complex subunit 5 isoform a [Homo... 
ANAPC5                0.846   anaphase-promoting complex subunit 5 isoform b [Hom...
CLSPN                 0.007   claspin 
GOLGB1                0.006   golgi autoantigen, golgin subfamily b, macrogolgin ...
GOLGA4                0.006   golgi autoantigen, golgin subfamily a, 4 
CENPJ                 0.006   centromere protein J 
SH3TC2                0.006   SH3 domain and tetratricopeptide repeats 2 
TTC21B                0.006   tetratricopeptide repeat domain 21B 
TAF7L                 0.006   TATA box binding protein-associated factor, RNA poly...
MPHOSPH10             0.005   M-phase phosphoprotein 10 
HAP1                  0.005   huntingtin-associated protein 1 isoform 4 
HAP1                  0.005   huntingtin-associated protein 1 isoform 2 
USP34                 0.005   ubiquitin specific protease 34 
UGT2A1                0.005   UDP glucuronosyltransferase 2 family, polypeptide A...
PTTG1                 0.005   pituitary tumor-transforming protein 1 
MRVI1                 0.005   JAW1-related protein isoform a 
MRVI1                 0.005   JAW1-related protein isoform c 
MRVI1                 0.005   JAW1-related protein isoform b 
MRVI1                 0.005   JAW1-related protein isoform b 
C2orf39               0.005   hypothetical protein LOC92749 
CEP250                0.004   centrosomal protein 2 
RINT1                 0.004   RAD50 interactor 1 
CCDC108               0.004   coiled-coil domain containing 108 isoform 1 
RPRD1B                0.004   Regulation of nuclear pre-mRNA domain containing 1B ...
ACAD8                 0.004   acyl-Coenzyme A dehydrogenase family, member 8 
ADAL                  0.003   adenosine deaminase-like isoform 1 
LOC645202             0.003   PREDICTED: hypothetical protein LOC645202 
NCAPG                 0.003   chromosome condensation protein G 
YSK4                  0.003   Yeast Sps1/Ste20-related kinase 4 isoform 1 
ZNF853                0.003   zinc finger protein 853 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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