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Search of human proteins with 4757968
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4757968 Y chromosome chromodomain protein 2A [Homo sapiens]
(541 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|49355787 Y chromosome chromodomain protein 2B [Homo sapiens] 1078 0.0
gi|4757968 Y chromosome chromodomain protein 2A [Homo sapiens] 1078 0.0
gi|25453481 Y chromosome chromodomain protein 1, telomeric isofo... 1049 0.0
gi|51538573 chromodomain protein, Y-linked, 1B isoform a [Homo s... 1049 0.0
gi|4757966 Y chromosome chromodomain protein 1, telomeric isofor... 1030 0.0
gi|51538581 chromodomain protein, Y-linked, 1B isoform b [Homo s... 1030 0.0
gi|221307494 chromodomain protein, Y chromosome-like isoform a [... 688 0.0
gi|221136756 chromodomain protein, Y chromosome-like isoform d [... 520 e-147
gi|221136753 chromodomain protein, Y chromosome-like isoform d [... 520 e-147
gi|116235487 chromodomain protein, Y-like 2 [Homo sapiens] 394 e-109
gi|45643119 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Hom... 184 2e-46
gi|45643121 peroxisomal D3,D2-enoyl-CoA isomerase isoform 2 [Hom... 159 5e-39
gi|194097323 mitochondrial short-chain enoyl-coenzyme A hydratas... 87 3e-17
gi|70995211 peroxisomal enoyl-coenzyme A hydratase-like protein ... 80 4e-15
gi|31542718 enoyl Coenzyme A hydratase domain containing 3 [Homo... 76 9e-14
gi|41055989 M-phase phosphoprotein 8 [Homo sapiens] 67 5e-11
gi|4502327 AU RNA binding protein/enoyl-Coenzyme A hydratase pre... 64 4e-10
gi|20127408 mitochondrial trifunctional protein, alpha subunit p... 57 4e-08
gi|68989263 enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A... 56 7e-08
gi|15082258 chromobox homolog 3 [Homo sapiens] 55 2e-07
gi|20544151 chromobox homolog 3 [Homo sapiens] 55 2e-07
gi|188035910 heterochromatin protein 1-alpha [Homo sapiens] 54 3e-07
gi|188035908 heterochromatin protein 1-alpha [Homo sapiens] 54 3e-07
gi|6912292 heterochromatin protein 1-alpha [Homo sapiens] 54 3e-07
gi|5803076 heterochromatin protein 1-beta [Homo sapiens] 52 1e-06
gi|187960037 heterochromatin protein 1-beta [Homo sapiens] 52 1e-06
gi|157694516 enoyl Coenzyme A hydratase domain containing 1 isof... 49 9e-06
gi|213417737 enoyl Coenzyme A hydratase domain containing 1 isof... 49 9e-06
gi|28372505 chromobox homolog 7 [Homo sapiens] 47 3e-05
gi|61743963 chromobox homolog 2 isoform 1 [Homo sapiens] 47 3e-05
>gi|49355787 Y chromosome chromodomain protein 2B [Homo sapiens]
Length = 541
Score = 1078 bits (2789), Expect = 0.0
Identities = 541/541 (100%), Positives = 541/541 (100%)
Query: 1 MASQEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMNCEKCVHDFNRRQTE 60
MASQEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMNCEKCVHDFNRRQTE
Sbjct: 1 MASQEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMNCEKCVHDFNRRQTE 60
Query: 61 KQKKLTWTTTSRIFSNNARRRTSRSTKANYSKNSPKTPVTDKHHRSKNCKLFAASKNVRR 120
KQKKLTWTTTSRIFSNNARRRTSRSTKANYSKNSPKTPVTDKHHRSKNCKLFAASKNVRR
Sbjct: 61 KQKKLTWTTTSRIFSNNARRRTSRSTKANYSKNSPKTPVTDKHHRSKNCKLFAASKNVRR 120
Query: 121 KAASTLSDTKNMEIINSTIETLAPDSPFDHKKTVSGFQKLEKLDPIAADQQDTVVFKVTE 180
KAASTLSDTKNMEIINSTIETLAPDSPFDHKKTVSGFQKLEKLDPIAADQQDTVVFKVTE
Sbjct: 121 KAASTLSDTKNMEIINSTIETLAPDSPFDHKKTVSGFQKLEKLDPIAADQQDTVVFKVTE 180
Query: 181 GKLLRDPLSHPGAEQTGIQNKTQMHPLMSQMSGSVTASMATGSATRKGIVVLIDPLAANG 240
GKLLRDPLSHPGAEQTGIQNKTQMHPLMSQMSGSVTASMATGSATRKGIVVLIDPLAANG
Sbjct: 181 GKLLRDPLSHPGAEQTGIQNKTQMHPLMSQMSGSVTASMATGSATRKGIVVLIDPLAANG 240
Query: 241 TTDMHTSVPRVKGGQRNITDDSRGQPFIKKMHFTIRLTESAITYRDIVVKKEDGFTQIVL 300
TTDMHTSVPRVKGGQRNITDDSRGQPFIKKMHFTIRLTESAITYRDIVVKKEDGFTQIVL
Sbjct: 241 TTDMHTSVPRVKGGQRNITDDSRGQPFIKKMHFTIRLTESAITYRDIVVKKEDGFTQIVL 300
Query: 301 STRSTEKNALNTEVIKEMVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVRHLRNDRN 360
STRSTEKNALNTEVIKEMVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVRHLRNDRN
Sbjct: 301 STRSTEKNALNTEVIKEMVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVRHLRNDRN 360
Query: 361 TASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTT 420
TASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTT
Sbjct: 361 TASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTT 420
Query: 421 FGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQI 480
FGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQI
Sbjct: 421 FGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQI 480
Query: 481 KELASYNAIVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVENKIDE 540
KELASYNAIVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVENKIDE
Sbjct: 481 KELASYNAIVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVENKIDE 540
Query: 541 F 541
F
Sbjct: 541 F 541
>gi|4757968 Y chromosome chromodomain protein 2A [Homo sapiens]
Length = 541
Score = 1078 bits (2789), Expect = 0.0
Identities = 541/541 (100%), Positives = 541/541 (100%)
Query: 1 MASQEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMNCEKCVHDFNRRQTE 60
MASQEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMNCEKCVHDFNRRQTE
Sbjct: 1 MASQEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMNCEKCVHDFNRRQTE 60
Query: 61 KQKKLTWTTTSRIFSNNARRRTSRSTKANYSKNSPKTPVTDKHHRSKNCKLFAASKNVRR 120
KQKKLTWTTTSRIFSNNARRRTSRSTKANYSKNSPKTPVTDKHHRSKNCKLFAASKNVRR
Sbjct: 61 KQKKLTWTTTSRIFSNNARRRTSRSTKANYSKNSPKTPVTDKHHRSKNCKLFAASKNVRR 120
Query: 121 KAASTLSDTKNMEIINSTIETLAPDSPFDHKKTVSGFQKLEKLDPIAADQQDTVVFKVTE 180
KAASTLSDTKNMEIINSTIETLAPDSPFDHKKTVSGFQKLEKLDPIAADQQDTVVFKVTE
Sbjct: 121 KAASTLSDTKNMEIINSTIETLAPDSPFDHKKTVSGFQKLEKLDPIAADQQDTVVFKVTE 180
Query: 181 GKLLRDPLSHPGAEQTGIQNKTQMHPLMSQMSGSVTASMATGSATRKGIVVLIDPLAANG 240
GKLLRDPLSHPGAEQTGIQNKTQMHPLMSQMSGSVTASMATGSATRKGIVVLIDPLAANG
Sbjct: 181 GKLLRDPLSHPGAEQTGIQNKTQMHPLMSQMSGSVTASMATGSATRKGIVVLIDPLAANG 240
Query: 241 TTDMHTSVPRVKGGQRNITDDSRGQPFIKKMHFTIRLTESAITYRDIVVKKEDGFTQIVL 300
TTDMHTSVPRVKGGQRNITDDSRGQPFIKKMHFTIRLTESAITYRDIVVKKEDGFTQIVL
Sbjct: 241 TTDMHTSVPRVKGGQRNITDDSRGQPFIKKMHFTIRLTESAITYRDIVVKKEDGFTQIVL 300
Query: 301 STRSTEKNALNTEVIKEMVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVRHLRNDRN 360
STRSTEKNALNTEVIKEMVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVRHLRNDRN
Sbjct: 301 STRSTEKNALNTEVIKEMVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVRHLRNDRN 360
Query: 361 TASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTT 420
TASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTT
Sbjct: 361 TASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTT 420
Query: 421 FGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQI 480
FGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQI
Sbjct: 421 FGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQI 480
Query: 481 KELASYNAIVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVENKIDE 540
KELASYNAIVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVENKIDE
Sbjct: 481 KELASYNAIVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVENKIDE 540
Query: 541 F 541
F
Sbjct: 541 F 541
>gi|25453481 Y chromosome chromodomain protein 1, telomeric isoform
a [Homo sapiens]
Length = 540
Score = 1049 bits (2712), Expect = 0.0
Identities = 530/541 (97%), Positives = 534/541 (98%), Gaps = 1/541 (0%)
Query: 1 MASQEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMNCEKCVHDFNRRQTE 60
MASQEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMNCEKCVHDFNRRQTE
Sbjct: 1 MASQEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMNCEKCVHDFNRRQTE 60
Query: 61 KQKKLTWTTTSRIFSNNARRRTSRSTKANYSKNSPKTPVTDKHHRSKNCKLFAASKNVRR 120
KQKKLTWTTTSRIFSNNARRRTSRSTKANYSKNSPKTPVTDKHHRSKN KLFAASKNVRR
Sbjct: 61 KQKKLTWTTTSRIFSNNARRRTSRSTKANYSKNSPKTPVTDKHHRSKNRKLFAASKNVRR 120
Query: 121 KAASTLSDTKNMEIINSTIETLAPDSPFDHKKTVSGFQKLEKLDPIAADQQDTVVFKVTE 180
KAAS LSDTKNMEIINSTIETLAPDSPFDHK TVSGFQKLEKLDPIAADQQDTVVFKVTE
Sbjct: 121 KAASILSDTKNMEIINSTIETLAPDSPFDHK-TVSGFQKLEKLDPIAADQQDTVVFKVTE 179
Query: 181 GKLLRDPLSHPGAEQTGIQNKTQMHPLMSQMSGSVTASMATGSATRKGIVVLIDPLAANG 240
GKLLRDPLS PGAEQTGIQNKTQ+HPLMSQMSGSVTASMATGSATRKGIVVLIDPLAANG
Sbjct: 180 GKLLRDPLSRPGAEQTGIQNKTQIHPLMSQMSGSVTASMATGSATRKGIVVLIDPLAANG 239
Query: 241 TTDMHTSVPRVKGGQRNITDDSRGQPFIKKMHFTIRLTESAITYRDIVVKKEDGFTQIVL 300
TTDMHTSVPRVKGGQRNITDDSR QPFIKKMHFTIRLTESA TYRDIVVKKEDGFTQIVL
Sbjct: 240 TTDMHTSVPRVKGGQRNITDDSRDQPFIKKMHFTIRLTESASTYRDIVVKKEDGFTQIVL 299
Query: 301 STRSTEKNALNTEVIKEMVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVRHLRNDRN 360
STRSTEKNALNTEVIKE+VNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFV+HLRN+RN
Sbjct: 300 STRSTEKNALNTEVIKEIVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVKHLRNNRN 359
Query: 361 TASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTT 420
TASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTT
Sbjct: 360 TASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTT 419
Query: 421 FGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQI 480
FGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQI
Sbjct: 420 FGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQI 479
Query: 481 KELASYNAIVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVENKIDE 540
KELASYN IVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVENKIDE
Sbjct: 480 KELASYNPIVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVENKIDE 539
Query: 541 F 541
F
Sbjct: 540 F 540
>gi|51538573 chromodomain protein, Y-linked, 1B isoform a [Homo
sapiens]
Length = 540
Score = 1049 bits (2712), Expect = 0.0
Identities = 530/541 (97%), Positives = 534/541 (98%), Gaps = 1/541 (0%)
Query: 1 MASQEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMNCEKCVHDFNRRQTE 60
MASQEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMNCEKCVHDFNRRQTE
Sbjct: 1 MASQEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMNCEKCVHDFNRRQTE 60
Query: 61 KQKKLTWTTTSRIFSNNARRRTSRSTKANYSKNSPKTPVTDKHHRSKNCKLFAASKNVRR 120
KQKKLTWTTTSRIFSNNARRRTSRSTKANYSKNSPKTPVTDKHHRSKN KLFAASKNVRR
Sbjct: 61 KQKKLTWTTTSRIFSNNARRRTSRSTKANYSKNSPKTPVTDKHHRSKNRKLFAASKNVRR 120
Query: 121 KAASTLSDTKNMEIINSTIETLAPDSPFDHKKTVSGFQKLEKLDPIAADQQDTVVFKVTE 180
KAAS LSDTKNMEIINSTIETLAPDSPFDHK TVSGFQKLEKLDPIAADQQDTVVFKVTE
Sbjct: 121 KAASILSDTKNMEIINSTIETLAPDSPFDHK-TVSGFQKLEKLDPIAADQQDTVVFKVTE 179
Query: 181 GKLLRDPLSHPGAEQTGIQNKTQMHPLMSQMSGSVTASMATGSATRKGIVVLIDPLAANG 240
GKLLRDPLS PGAEQTGIQNKTQ+HPLMSQMSGSVTASMATGSATRKGIVVLIDPLAANG
Sbjct: 180 GKLLRDPLSRPGAEQTGIQNKTQIHPLMSQMSGSVTASMATGSATRKGIVVLIDPLAANG 239
Query: 241 TTDMHTSVPRVKGGQRNITDDSRGQPFIKKMHFTIRLTESAITYRDIVVKKEDGFTQIVL 300
TTDMHTSVPRVKGGQRNITDDSR QPFIKKMHFTIRLTESA TYRDIVVKKEDGFTQIVL
Sbjct: 240 TTDMHTSVPRVKGGQRNITDDSRDQPFIKKMHFTIRLTESASTYRDIVVKKEDGFTQIVL 299
Query: 301 STRSTEKNALNTEVIKEMVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVRHLRNDRN 360
STRSTEKNALNTEVIKE+VNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFV+HLRN+RN
Sbjct: 300 STRSTEKNALNTEVIKEIVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVKHLRNNRN 359
Query: 361 TASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTT 420
TASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTT
Sbjct: 360 TASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTT 419
Query: 421 FGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQI 480
FGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQI
Sbjct: 420 FGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQI 479
Query: 481 KELASYNAIVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVENKIDE 540
KELASYN IVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVENKIDE
Sbjct: 480 KELASYNPIVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVENKIDE 539
Query: 541 F 541
F
Sbjct: 540 F 540
>gi|4757966 Y chromosome chromodomain protein 1, telomeric isoform b
[Homo sapiens]
Length = 554
Score = 1030 bits (2664), Expect = 0.0
Identities = 521/532 (97%), Positives = 525/532 (98%), Gaps = 1/532 (0%)
Query: 1 MASQEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMNCEKCVHDFNRRQTE 60
MASQEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMNCEKCVHDFNRRQTE
Sbjct: 1 MASQEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMNCEKCVHDFNRRQTE 60
Query: 61 KQKKLTWTTTSRIFSNNARRRTSRSTKANYSKNSPKTPVTDKHHRSKNCKLFAASKNVRR 120
KQKKLTWTTTSRIFSNNARRRTSRSTKANYSKNSPKTPVTDKHHRSKN KLFAASKNVRR
Sbjct: 61 KQKKLTWTTTSRIFSNNARRRTSRSTKANYSKNSPKTPVTDKHHRSKNRKLFAASKNVRR 120
Query: 121 KAASTLSDTKNMEIINSTIETLAPDSPFDHKKTVSGFQKLEKLDPIAADQQDTVVFKVTE 180
KAAS LSDTKNMEIINSTIETLAPDSPFDHK TVSGFQKLEKLDPIAADQQDTVVFKVTE
Sbjct: 121 KAASILSDTKNMEIINSTIETLAPDSPFDHK-TVSGFQKLEKLDPIAADQQDTVVFKVTE 179
Query: 181 GKLLRDPLSHPGAEQTGIQNKTQMHPLMSQMSGSVTASMATGSATRKGIVVLIDPLAANG 240
GKLLRDPLS PGAEQTGIQNKTQ+HPLMSQMSGSVTASMATGSATRKGIVVLIDPLAANG
Sbjct: 180 GKLLRDPLSRPGAEQTGIQNKTQIHPLMSQMSGSVTASMATGSATRKGIVVLIDPLAANG 239
Query: 241 TTDMHTSVPRVKGGQRNITDDSRGQPFIKKMHFTIRLTESAITYRDIVVKKEDGFTQIVL 300
TTDMHTSVPRVKGGQRNITDDSR QPFIKKMHFTIRLTESA TYRDIVVKKEDGFTQIVL
Sbjct: 240 TTDMHTSVPRVKGGQRNITDDSRDQPFIKKMHFTIRLTESASTYRDIVVKKEDGFTQIVL 299
Query: 301 STRSTEKNALNTEVIKEMVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVRHLRNDRN 360
STRSTEKNALNTEVIKE+VNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFV+HLRN+RN
Sbjct: 300 STRSTEKNALNTEVIKEIVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVKHLRNNRN 359
Query: 361 TASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTT 420
TASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTT
Sbjct: 360 TASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTT 419
Query: 421 FGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQI 480
FGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQI
Sbjct: 420 FGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQI 479
Query: 481 KELASYNAIVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLK 532
KELASYN IVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLK
Sbjct: 480 KELASYNPIVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLK 531
>gi|51538581 chromodomain protein, Y-linked, 1B isoform b [Homo
sapiens]
Length = 554
Score = 1030 bits (2664), Expect = 0.0
Identities = 521/532 (97%), Positives = 525/532 (98%), Gaps = 1/532 (0%)
Query: 1 MASQEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMNCEKCVHDFNRRQTE 60
MASQEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMNCEKCVHDFNRRQTE
Sbjct: 1 MASQEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMNCEKCVHDFNRRQTE 60
Query: 61 KQKKLTWTTTSRIFSNNARRRTSRSTKANYSKNSPKTPVTDKHHRSKNCKLFAASKNVRR 120
KQKKLTWTTTSRIFSNNARRRTSRSTKANYSKNSPKTPVTDKHHRSKN KLFAASKNVRR
Sbjct: 61 KQKKLTWTTTSRIFSNNARRRTSRSTKANYSKNSPKTPVTDKHHRSKNRKLFAASKNVRR 120
Query: 121 KAASTLSDTKNMEIINSTIETLAPDSPFDHKKTVSGFQKLEKLDPIAADQQDTVVFKVTE 180
KAAS LSDTKNMEIINSTIETLAPDSPFDHK TVSGFQKLEKLDPIAADQQDTVVFKVTE
Sbjct: 121 KAASILSDTKNMEIINSTIETLAPDSPFDHK-TVSGFQKLEKLDPIAADQQDTVVFKVTE 179
Query: 181 GKLLRDPLSHPGAEQTGIQNKTQMHPLMSQMSGSVTASMATGSATRKGIVVLIDPLAANG 240
GKLLRDPLS PGAEQTGIQNKTQ+HPLMSQMSGSVTASMATGSATRKGIVVLIDPLAANG
Sbjct: 180 GKLLRDPLSRPGAEQTGIQNKTQIHPLMSQMSGSVTASMATGSATRKGIVVLIDPLAANG 239
Query: 241 TTDMHTSVPRVKGGQRNITDDSRGQPFIKKMHFTIRLTESAITYRDIVVKKEDGFTQIVL 300
TTDMHTSVPRVKGGQRNITDDSR QPFIKKMHFTIRLTESA TYRDIVVKKEDGFTQIVL
Sbjct: 240 TTDMHTSVPRVKGGQRNITDDSRDQPFIKKMHFTIRLTESASTYRDIVVKKEDGFTQIVL 299
Query: 301 STRSTEKNALNTEVIKEMVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVRHLRNDRN 360
STRSTEKNALNTEVIKE+VNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFV+HLRN+RN
Sbjct: 300 STRSTEKNALNTEVIKEIVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVKHLRNNRN 359
Query: 361 TASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTT 420
TASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTT
Sbjct: 360 TASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTT 419
Query: 421 FGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQI 480
FGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQI
Sbjct: 420 FGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQI 479
Query: 481 KELASYNAIVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLK 532
KELASYN IVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLK
Sbjct: 480 KELASYNPIVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLK 531
>gi|221307494 chromodomain protein, Y chromosome-like isoform a
[Homo sapiens]
Length = 544
Score = 688 bits (1775), Expect = 0.0
Identities = 347/545 (63%), Positives = 427/545 (78%), Gaps = 5/545 (0%)
Query: 1 MASQE-FEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMNCEKCVHDFNRRQT 59
MAS+E +EVE IVDKR++K G T+YLVRWKGYD +DDTWEPEQHL+NCE+ +HDFNRR T
Sbjct: 1 MASEELYEVERIVDKRKNKKGKTEYLVRWKGYDSEDDTWEPEQHLVNCEEYIHDFNRRHT 60
Query: 60 EKQKKLTWTTTSRIFSNNARRRTSRSTKANYSKNSPKTPVTDKHHRSKNCKLFAASKNVR 119
EKQK+ T T T+R NNAR++ SRST +N+SK SPK V K H SKN +LFAAS+ R
Sbjct: 61 EKQKESTLTRTNRTSPNNARKQISRSTNSNFSKTSPKALVIGKDHESKNSQLFAASQKFR 120
Query: 120 RKAASTLSDTKNMEIINSTIETLAPDSPFDHKKTVSGFQKL--EKLDPIAADQQDTVVFK 177
+ A +LS KNM++ S I+ L P SP + V GFQ EKLDP+ Q+DTV +
Sbjct: 121 KNTAPSLSSRKNMDLAKSGIKILVPKSPVKSRTAVDGFQSESPEKLDPVEQGQEDTVAPE 180
Query: 178 VTEGKLLRDPLSHPGAEQTGIQNKTQMHPLMSQMSGSVTASMATGSATR-KGIVVLIDPL 236
V K + L PGAE+ + ++ ++HPL+ Q+ G VTA+MATG A KG +D L
Sbjct: 181 VAAEKPV-GALLGPGAERARMGSRPRIHPLVPQVPGPVTAAMATGLAVNGKGTSPFMDAL 239
Query: 237 AANGTTDMHTSVPRVKGGQRNITDDSRGQPFIKKMHFTIRLTESAITYRDIVVKKEDGFT 296
ANGTT++ TSV V +R DD R QPF K++ F++R TESA YRDIVV+K+DGFT
Sbjct: 240 TANGTTNIQTSVTGVTASKRKFIDDRRDQPFDKRLRFSVRQTESAYRYRDIVVRKQDGFT 299
Query: 297 QIVLSTRSTEKNALNTEVIKEMVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVRHLR 356
I+LST+S+E N+LN EV++E+ +AL++AAADDSKLVL SA GSVFCCGLDF YF+R L
Sbjct: 300 HILLSTKSSENNSLNPEVMREVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRLT 359
Query: 357 NDRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQT 416
+DR S +M + I+NFVNTFIQFKKPI+V+VNGPAIGLGASILPLCD+VWANEKAWFQT
Sbjct: 360 DDRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQT 419
Query: 417 PYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEV 476
PYTTFGQSPDGCS++ FPK+MG ASANEML++GRKLTA+EAC KGLVSQVF GTFTQEV
Sbjct: 420 PYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEV 479
Query: 477 MIQIKELASYNAIVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVEN 536
M++IKELAS N +VLEE KALVRCN+K+ELEQANERECEVL+KIW SAQG++SMLKY++
Sbjct: 480 MVRIKELASCNPVVLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQR 539
Query: 537 KIDEF 541
KIDEF
Sbjct: 540 KIDEF 544
>gi|221136756 chromodomain protein, Y chromosome-like isoform d
[Homo sapiens]
Length = 412
Score = 520 bits (1338), Expect = e-147
Identities = 264/413 (63%), Positives = 325/413 (78%), Gaps = 4/413 (0%)
Query: 132 MEIINSTIETLAPDSPFDHKKTVSGFQKL--EKLDPIAADQQDTVVFKVTEGKLLRDPLS 189
M++ S I+ L P SP + V GFQ EKLDP+ Q+DTV +V K + L
Sbjct: 1 MDLAKSGIKILVPKSPVKSRTAVDGFQSESPEKLDPVEQGQEDTVAPEVAAEKPV-GALL 59
Query: 190 HPGAEQTGIQNKTQMHPLMSQMSGSVTASMATGSATR-KGIVVLIDPLAANGTTDMHTSV 248
PGAE+ + ++ ++HPL+ Q+ G VTA+MATG A KG +D L ANGTT++ TSV
Sbjct: 60 GPGAERARMGSRPRIHPLVPQVPGPVTAAMATGLAVNGKGTSPFMDALTANGTTNIQTSV 119
Query: 249 PRVKGGQRNITDDSRGQPFIKKMHFTIRLTESAITYRDIVVKKEDGFTQIVLSTRSTEKN 308
V +R DD R QPF K++ F++R TESA YRDIVV+K+DGFT I+LST+S+E N
Sbjct: 120 TGVTASKRKFIDDRRDQPFDKRLRFSVRQTESAYRYRDIVVRKQDGFTHILLSTKSSENN 179
Query: 309 ALNTEVIKEMVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVRHLRNDRNTASLEMVD 368
+LN EV++E+ +AL++AAADDSKLVL SA GSVFCCGLDF YF+R L +DR S +M +
Sbjct: 180 SLNPEVMREVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAE 239
Query: 369 TIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGC 428
I+NFVNTFIQFKKPI+V+VNGPAIGLGASILPLCD+VWANEKAWFQTPYTTFGQSPDGC
Sbjct: 240 AIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGC 299
Query: 429 SSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNA 488
S++ FPK+MG ASANEML++GRKLTA+EAC KGLVSQVF GTFTQEVM++IKELAS N
Sbjct: 300 STVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNP 359
Query: 489 IVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVENKIDEF 541
+VLEE KALVRCN+K+ELEQANERECEVL+KIW SAQG++SMLKY++ KIDEF
Sbjct: 360 VVLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKIDEF 412
>gi|221136753 chromodomain protein, Y chromosome-like isoform d
[Homo sapiens]
Length = 412
Score = 520 bits (1338), Expect = e-147
Identities = 264/413 (63%), Positives = 325/413 (78%), Gaps = 4/413 (0%)
Query: 132 MEIINSTIETLAPDSPFDHKKTVSGFQKL--EKLDPIAADQQDTVVFKVTEGKLLRDPLS 189
M++ S I+ L P SP + V GFQ EKLDP+ Q+DTV +V K + L
Sbjct: 1 MDLAKSGIKILVPKSPVKSRTAVDGFQSESPEKLDPVEQGQEDTVAPEVAAEKPV-GALL 59
Query: 190 HPGAEQTGIQNKTQMHPLMSQMSGSVTASMATGSATR-KGIVVLIDPLAANGTTDMHTSV 248
PGAE+ + ++ ++HPL+ Q+ G VTA+MATG A KG +D L ANGTT++ TSV
Sbjct: 60 GPGAERARMGSRPRIHPLVPQVPGPVTAAMATGLAVNGKGTSPFMDALTANGTTNIQTSV 119
Query: 249 PRVKGGQRNITDDSRGQPFIKKMHFTIRLTESAITYRDIVVKKEDGFTQIVLSTRSTEKN 308
V +R DD R QPF K++ F++R TESA YRDIVV+K+DGFT I+LST+S+E N
Sbjct: 120 TGVTASKRKFIDDRRDQPFDKRLRFSVRQTESAYRYRDIVVRKQDGFTHILLSTKSSENN 179
Query: 309 ALNTEVIKEMVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVRHLRNDRNTASLEMVD 368
+LN EV++E+ +AL++AAADDSKLVL SA GSVFCCGLDF YF+R L +DR S +M +
Sbjct: 180 SLNPEVMREVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAE 239
Query: 369 TIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGC 428
I+NFVNTFIQFKKPI+V+VNGPAIGLGASILPLCD+VWANEKAWFQTPYTTFGQSPDGC
Sbjct: 240 AIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGC 299
Query: 429 SSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNA 488
S++ FPK+MG ASANEML++GRKLTA+EAC KGLVSQVF GTFTQEVM++IKELAS N
Sbjct: 300 STVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNP 359
Query: 489 IVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVENKIDEF 541
+VLEE KALVRCN+K+ELEQANERECEVL+KIW SAQG++SMLKY++ KIDEF
Sbjct: 360 VVLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKIDEF 412
>gi|116235487 chromodomain protein, Y-like 2 [Homo sapiens]
Length = 506
Score = 394 bits (1012), Expect = e-109
Identities = 225/544 (41%), Positives = 323/544 (59%), Gaps = 43/544 (7%)
Query: 1 MASQE-FEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMNCEKCVHDFNRRQT 59
MAS + +EVE IVDKR++K G +YL+RWKGY +DTWEPE HL++CE+ + +FN
Sbjct: 1 MASGDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEFNGLHM 60
Query: 60 EKQKKLTWTTTSRIFSNNARRRTSRSTKANYSKNSPKTPVTDK---HHRSKNCKLFAASK 116
K K++ + + S + R SR + P P K H R + A K
Sbjct: 61 SKDKRIK---SGKQSSTSKLLRDSRGPSVEKLSHRPSDPGKSKGTSHKRKRINPPLAKPK 117
Query: 117 NVRRKAASTLSDTKNMEIINSTIETLAPDSPFDHKKTVSGFQKLEKLDPIAADQQDTVVF 176
S+ D + T + P KK+ +G + + A ++D F
Sbjct: 118 KGYSGKPSSGGDRATKTVSYRTTPSGLQIMPL--KKSQNGMENGD-----AGSEKDERHF 170
Query: 177 KVTEGKLLRDPLSHPGAEQTGIQNKTQMHPLMSQMSGSVTASMATGSATRKGIVVLIDPL 236
+ D H G + G ++ + A GSA
Sbjct: 171 GNGSHQPGLDLNDHVGEQDMG----------ECDVNHATLAENGLGSAL----------- 209
Query: 237 AANGTTDMHTSVPRVKGGQRNITDDSRGQPFIKKMHFTIRLTESAITYRDIVVKKEDGFT 296
NG ++H+ V R +++ D K++ +++R ES +RDIVV+KE+GFT
Sbjct: 210 -TNGGLNLHSPVKRKLEAEKDYVFD-------KRLRYSVRQNESNCRFRDIVVRKEEGFT 261
Query: 297 QIVLSTRSTEKNALNTEVIKEMVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVRHLR 356
I+LS+++++ NAL E++KE+ AL +AA DDSKL+L SA GSVFC GLD+ Y + L
Sbjct: 262 HILLSSQTSDNNALTPEIMKEVRRALCNAATDDSKLLLLSAVGSVFCSGLDYSYLIGRLS 321
Query: 357 NDRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQT 416
+DR S + + I++FV FIQFKKPIVV++NGPA+GLGASILPLCD+VWA+EKAWFQT
Sbjct: 322 SDRRKESTRIAEAIRDFVKAFIQFKKPIVVAINGPALGLGASILPLCDIVWASEKAWFQT 381
Query: 417 PYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEV 476
PY T +P GCSS TFP+++G A ANEML GRKLTA+EAC++GLVSQVF TF+QEV
Sbjct: 382 PYATIRLTPAGCSSYTFPQILGVALANEMLFCGRKLTAQEACSRGLVSQVFWPTTFSQEV 441
Query: 477 MIQIKELASYNAIVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVEN 536
M+++KE+AS +A+VLEE K LVR +K LE NE+EC +L+++WSS++G++S+ Y+++
Sbjct: 442 MLRVKEMASCSAVVLEESKCLVRSFLKSVLEDVNEKECLMLKQLWSSSKGLDSLFSYLQD 501
Query: 537 KIDE 540
KI E
Sbjct: 502 KIYE 505
>gi|45643119 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Homo
sapiens]
Length = 364
Score = 184 bits (467), Expect = 2e-46
Identities = 98/254 (38%), Positives = 149/254 (58%), Gaps = 1/254 (0%)
Query: 284 YRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEMVNALNSAAADDSKLVLFSAAGSVFC 343
+ +VV EDG T+I+ + R +KNA+NTE+ E++ AL +A+ DDS + + + G +
Sbjct: 109 FETLVVTSEDGITKIMFN-RPKKKNAINTEMYHEIMRALKAASKDDSIITVLTGNGDYYS 167
Query: 344 CGLDFGYFVRHLRNDRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLC 403
G D F + ++ FV FI F KP++ VNGPA+G+ ++L L
Sbjct: 168 SGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLF 227
Query: 404 DLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLV 463
D V+A+++A F TP++ GQSP+GCSS TFPK+M A A EMLI G+KLTA EACA+GLV
Sbjct: 228 DAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLV 287
Query: 464 SQVFLTGTFTQEVMIQIKELASYNAIVLEECKALVRCNIKLELEQANERECEVLRKIWSS 523
++VF TF +EV ++K A L K ++R + +L N EC VL+ W S
Sbjct: 288 TEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRWLS 347
Query: 524 AQGIESMLKYVENK 537
+ +++ ++ K
Sbjct: 348 DECTNAVVNFLSRK 361
>gi|45643121 peroxisomal D3,D2-enoyl-CoA isomerase isoform 2 [Homo
sapiens]
Length = 227
Score = 159 bits (403), Expect = 5e-39
Identities = 84/221 (38%), Positives = 127/221 (57%)
Query: 317 EMVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVRHLRNDRNTASLEMVDTIKNFVNT 376
E++ AL +A+ DDS + + + G + G D F + ++ FV
Sbjct: 4 EIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGC 63
Query: 377 FIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKM 436
FI F KP++ VNGPA+G+ ++L L D V+A+++A F TP++ GQSP+GCSS TFPK+
Sbjct: 64 FIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKI 123
Query: 437 MGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNAIVLEECKA 496
M A A EMLI G+KLTA EACA+GLV++VF TF +EV ++K A L K
Sbjct: 124 MSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKE 183
Query: 497 LVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVENK 537
++R + +L N EC VL+ W S + +++ ++ K
Sbjct: 184 VIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRK 224
>gi|194097323 mitochondrial short-chain enoyl-coenzyme A hydratase 1
precursor [Homo sapiens]
Length = 290
Score = 87.4 bits (215), Expect = 3e-17
Identities = 64/267 (23%), Positives = 128/267 (47%), Gaps = 13/267 (4%)
Query: 280 SAITYRDIVVKK--EDGFTQIVLSTRSTEKNALNTEVIKEMVNALNSAAADDSK-LVLFS 336
S + I+ +K ++ ++ R NAL +I E+ AL + D + ++ +
Sbjct: 29 SGANFEYIIAEKRGKNNTVGLIQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIVLT 88
Query: 337 AAGSVFCCGLDFGYFVRHLRNDRNTASLEMVDT--IKNFVNTFIQFKKPIVVSVNGPAIG 394
F G D ++ +N + + + +K++ + Q KKP++ +VNG A G
Sbjct: 89 GGDKAFAAGAD-------IKEMQNLSFQDCYSSKFLKHW-DHLTQVKKPVIAAVNGYAFG 140
Query: 395 LGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTA 454
G + +CD+++A EKA F P G P + + +GK+ A EM++ G +++A
Sbjct: 141 GGCELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISA 200
Query: 455 REACAKGLVSQVFLTGTFTQEVMIQIKELASYNAIVLEECKALVRCNIKLELEQANEREC 514
++A GLVS++ T +E + +++AS + IV+ K V ++ L + ++ E
Sbjct: 201 QDAKQAGLVSKICPVETLVEEAIQCAEKIASNSKIVVAMAKESVNAAFEMTLTEGSKLEK 260
Query: 515 EVLRKIWSSAQGIESMLKYVENKIDEF 541
++ +++ E M +VE + F
Sbjct: 261 KLFYSTFATDDRKEGMTAFVEKRKANF 287
>gi|70995211 peroxisomal enoyl-coenzyme A hydratase-like protein
[Homo sapiens]
Length = 328
Score = 80.5 bits (197), Expect = 4e-15
Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 9/194 (4%)
Query: 283 TYRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEMVNALNSAAAD-DSKLVLFSAAGSV 341
+Y + V V R ++NA+N +EMV N + D D + V+ S AG +
Sbjct: 54 SYESLRVTSAQKHVLHVQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKM 113
Query: 342 FCCGLDF----GYFVRHLRNDRNTASLEMVDTIKNFVNTFIQFK---KPIVVSVNGPAIG 394
F G+D ++ +D S + D I + TF + KP++ +V+G IG
Sbjct: 114 FTAGIDLMDMASDILQPKGDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIG 173
Query: 395 LGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKAS-ANEMLIAGRKLT 453
G ++ CD+ + + A+FQ G + D + PK++G S NE+ RK+
Sbjct: 174 GGVDLVTACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMM 233
Query: 454 AREACAKGLVSQVF 467
A EA GLVS+VF
Sbjct: 234 ADEALGSGLVSRVF 247
>gi|31542718 enoyl Coenzyme A hydratase domain containing 3 [Homo
sapiens]
Length = 303
Score = 75.9 bits (185), Expect = 9e-14
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 10/215 (4%)
Query: 285 RDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEMVN-ALNSAAADDSKLVLFSAAGSVFC 343
R ++ DG IVLS ++N L+ ++K + + L+ A ++D K+++ SA G VF
Sbjct: 46 RPTSARQLDGIRNIVLSNPK-KRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFS 104
Query: 344 CGLDFGYFVRHLRNDRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLC 403
G D D + E+ T + P++ VNG A G ++ C
Sbjct: 105 SGHDLKELTEEQGRDYHA---EVFQTCSKVMMHIRNHPVPVIAMVNGLATAAGCQLVASC 161
Query: 404 DLVWANEKAWFQTPYTTFGQSPDGCSS--ITFPKMMGKASANEMLIAGRKLTAREACAKG 461
D+ A++K+ F TP G CS+ + + + + A EML G ++A+EA G
Sbjct: 162 DIAVASDKSSFATPGVNVGLF---CSTPGVALARAVPRKVALEMLFTGEPISAQEALLHG 218
Query: 462 LVSQVFLTGTFTQEVMIQIKELASYNAIVLEECKA 496
L+S+V +E M +++AS + V+ KA
Sbjct: 219 LLSKVVPEAELQEETMRIARKIASLSRPVVSLGKA 253
>gi|41055989 M-phase phosphoprotein 8 [Homo sapiens]
Length = 860
Score = 66.6 bits (161), Expect = 5e-11
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 14/187 (7%)
Query: 6 FEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMNCEKCVHDFNRRQTEKQKKL 65
FEVE I+D + + G Y VRWKGY DDTWEPE HL +C++ + +F ++ E + K
Sbjct: 59 FEVEKILDMKTE-GGKVLYKVRWKGYTSDDDTWEPEIHLEDCKEVLLEFRKKIAENKAKA 117
Query: 66 TWTTTSR------IFSNNARRRTSRSTKANYSKNSPKTPVTDKHHRSKNCKLFAASKNVR 119
R IF N+ TK + S K + + +S + +
Sbjct: 118 VRKDIQRLSLNNDIFEANSDSDQQSETKEDTSPKKKKKKLRQREEKSPD------DLKKK 171
Query: 120 RKAASTLSDTKNMEIINSTIETLAPDSPFDHKKTVSGFQKLEKLDPIAADQQDTVVFKVT 179
+ A L D K+ + S++E+L D + + + + E P + ++T K
Sbjct: 172 KAKAGKLKD-KSKPDLESSLESLVFDLRTKKRISEAKEELKESKKPKKDEVKETKELKKV 230
Query: 180 EGKLLRD 186
+ +RD
Sbjct: 231 KKGEIRD 237
>gi|4502327 AU RNA binding protein/enoyl-Coenzyme A hydratase
precursor [Homo sapiens]
Length = 339
Score = 63.9 bits (154), Expect = 4e-10
Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 264 GQPFIKKMHFTIRLTESAITYRDIVVKKEDGFTQIVLS-TRSTEKNALNTEVIKEMVNAL 322
G P K+ + + TE + R + +E+ +VL R+ KN+L+ +IK + A+
Sbjct: 59 GGPAPKRGYSSEMKTEDELRVRHL---EEENRGIVVLGINRAYGKNSLSKNLIKMLSKAV 115
Query: 323 NSAAADDS--KLVLFSAAGSVFCCGLDFGYFVRHLRNDRNTASLEM---VDTIKNFVNTF 377
++ +D +++ S +FC G D L+ +S E+ V I+ +N
Sbjct: 116 DALKSDKKVRTIIIRSEVPGIFCAGAD-------LKERAKMSSSEVGPFVSKIRAVINDI 168
Query: 378 IQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMM 437
P + +++G A+G G + CD+ A A T P G + P+ +
Sbjct: 169 ANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAI 228
Query: 438 GKASANEMLIAGRKLTAREACAKGLVSQV 466
G + A E++ + R L +EA A GL+S V
Sbjct: 229 GMSLAKELIFSARVLDGKEAKAVGLISHV 257
>gi|20127408 mitochondrial trifunctional protein, alpha subunit
precursor [Homo sapiens]
Length = 763
Score = 57.0 bits (136), Expect = 4e-08
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 7/171 (4%)
Query: 300 LSTRSTEKNALNTEVIKEMVNALNSAAADDS--KLVLFSAAGSVFCCGLDFGYFVRHLRN 357
+++ +++ N L+ E+ E +N A D VL S+ F G D
Sbjct: 54 INSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGCFIAGADINMLAACKTL 113
Query: 358 DRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCD--LVWANEKAWFQ 415
T ++ + V + KPIV ++NG +G G + C + + K
Sbjct: 114 QEVT---QLSQEAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRKTVLG 170
Query: 416 TPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQV 466
TP G P + PKM+G +A +M++ GR + A A GLV Q+
Sbjct: 171 TPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMGLVDQL 221
>gi|68989263 enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A
dehydrogenase [Homo sapiens]
Length = 723
Score = 56.2 bits (134), Expect = 7e-08
Identities = 40/169 (23%), Positives = 78/169 (46%), Gaps = 10/169 (5%)
Query: 299 VLSTRSTEKNALNTEVIKEMVNALNSAAADDS-KLVLFSAAGSVFCCGLDFGYFVRHLRN 357
++ R+ NA++T +++++ L A D + K ++ A F G D F
Sbjct: 13 LIRLRNPPVNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGADIRGF------ 66
Query: 358 DRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTP 417
+A T+ + V+ + +KP+V ++ G A G G + C A+ +A P
Sbjct: 67 ---SAPRTFGLTLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQVGLP 123
Query: 418 YTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQV 466
T G P + P++ G +A +++ +GR++ A EA G++ +V
Sbjct: 124 EVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKV 172
>gi|15082258 chromobox homolog 3 [Homo sapiens]
Length = 183
Score = 55.1 bits (131), Expect = 2e-07
Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 15/100 (15%)
Query: 4 QEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMNCEKCVHDF-NRRQTEKQ 62
+EF VE ++D+R NG +Y ++WKG+ D+TWEPE++L +C + + F N ++ K+
Sbjct: 28 EEFVVEKVLDRRV-VNGKVEYFLKWKGFTDADNTWEPEENL-DCPELIEAFLNSQKAGKE 85
Query: 63 KKLTWTTTSRIFSNNARRRTSRSTKANYSKNSPKTPVTDK 102
K + +R++ ++++ SK+ K DK
Sbjct: 86 K------------DGTKRKSLSDSESDDSKSKKKRDAADK 113
>gi|20544151 chromobox homolog 3 [Homo sapiens]
Length = 183
Score = 55.1 bits (131), Expect = 2e-07
Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 15/100 (15%)
Query: 4 QEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMNCEKCVHDF-NRRQTEKQ 62
+EF VE ++D+R NG +Y ++WKG+ D+TWEPE++L +C + + F N ++ K+
Sbjct: 28 EEFVVEKVLDRRV-VNGKVEYFLKWKGFTDADNTWEPEENL-DCPELIEAFLNSQKAGKE 85
Query: 63 KKLTWTTTSRIFSNNARRRTSRSTKANYSKNSPKTPVTDK 102
K + +R++ ++++ SK+ K DK
Sbjct: 86 K------------DGTKRKSLSDSESDDSKSKKKRDAADK 113
>gi|188035910 heterochromatin protein 1-alpha [Homo sapiens]
Length = 191
Score = 54.3 bits (129), Expect = 3e-07
Identities = 29/93 (31%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 4 QEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMNCEKCVHDFNRRQTEKQK 63
+E+ VE ++D+R K G +YL++WKG+ ++ +TWEPE++L +C + + +F ++ K+
Sbjct: 18 EEYVVEKVLDRRVVK-GQVEYLLKWKGFSEEHNTWEPEKNL-DCPELISEFMKKY--KKM 73
Query: 64 KLTWTTTSRIFSNNARRRTSRSTKANYSKNSPK 96
K R S + +R+++ S A+ K+ K
Sbjct: 74 KEGENNKPREKSESNKRKSNFSNSADDIKSKKK 106
>gi|188035908 heterochromatin protein 1-alpha [Homo sapiens]
Length = 191
Score = 54.3 bits (129), Expect = 3e-07
Identities = 29/93 (31%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 4 QEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMNCEKCVHDFNRRQTEKQK 63
+E+ VE ++D+R K G +YL++WKG+ ++ +TWEPE++L +C + + +F ++ K+
Sbjct: 18 EEYVVEKVLDRRVVK-GQVEYLLKWKGFSEEHNTWEPEKNL-DCPELISEFMKKY--KKM 73
Query: 64 KLTWTTTSRIFSNNARRRTSRSTKANYSKNSPK 96
K R S + +R+++ S A+ K+ K
Sbjct: 74 KEGENNKPREKSESNKRKSNFSNSADDIKSKKK 106
>gi|6912292 heterochromatin protein 1-alpha [Homo sapiens]
Length = 191
Score = 54.3 bits (129), Expect = 3e-07
Identities = 29/93 (31%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 4 QEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMNCEKCVHDFNRRQTEKQK 63
+E+ VE ++D+R K G +YL++WKG+ ++ +TWEPE++L +C + + +F ++ K+
Sbjct: 18 EEYVVEKVLDRRVVK-GQVEYLLKWKGFSEEHNTWEPEKNL-DCPELISEFMKKY--KKM 73
Query: 64 KLTWTTTSRIFSNNARRRTSRSTKANYSKNSPK 96
K R S + +R+++ S A+ K+ K
Sbjct: 74 KEGENNKPREKSESNKRKSNFSNSADDIKSKKK 106
>gi|5803076 heterochromatin protein 1-beta [Homo sapiens]
Length = 185
Score = 52.0 bits (123), Expect = 1e-06
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 17/144 (11%)
Query: 4 QEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMNCEKCVHDFNRRQTEKQK 63
+E+ VE ++D+R K G +YL++WKG+ +D+TWEPE++L +C + +F + Q
Sbjct: 19 EEYVVEKVLDRRVVK-GKVEYLLKWKGFSDEDNTWEPEENL-DCPDLIAEFLQSQK---- 72
Query: 64 KLTWTTTSRIFSNNARRRTSRSTKANYSKNSPKTPVTDKHHRSKNCKLFAASKNVRRKAA 123
T S +R+ ++ ++ PK K S+ + FA R
Sbjct: 73 ----TAHETDKSEGGKRKADSDSEDKGEESKPK----KKKEESEKPRGFARGLEPERIIG 124
Query: 124 STLSDTKNMEII---NSTIETLAP 144
+T S + M ++ NS L P
Sbjct: 125 ATDSSGELMFLMKWKNSDEADLVP 148
>gi|187960037 heterochromatin protein 1-beta [Homo sapiens]
Length = 185
Score = 52.0 bits (123), Expect = 1e-06
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 17/144 (11%)
Query: 4 QEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMNCEKCVHDFNRRQTEKQK 63
+E+ VE ++D+R K G +YL++WKG+ +D+TWEPE++L +C + +F + Q
Sbjct: 19 EEYVVEKVLDRRVVK-GKVEYLLKWKGFSDEDNTWEPEENL-DCPDLIAEFLQSQK---- 72
Query: 64 KLTWTTTSRIFSNNARRRTSRSTKANYSKNSPKTPVTDKHHRSKNCKLFAASKNVRRKAA 123
T S +R+ ++ ++ PK K S+ + FA R
Sbjct: 73 ----TAHETDKSEGGKRKADSDSEDKGEESKPK----KKKEESEKPRGFARGLEPERIIG 124
Query: 124 STLSDTKNMEII---NSTIETLAP 144
+T S + M ++ NS L P
Sbjct: 125 ATDSSGELMFLMKWKNSDEADLVP 148
>gi|157694516 enoyl Coenzyme A hydratase domain containing 1 isoform
1 [Homo sapiens]
Length = 301
Score = 49.3 bits (116), Expect = 9e-06
Identities = 52/250 (20%), Positives = 105/250 (42%), Gaps = 7/250 (2%)
Query: 287 IVVKKEDGFTQIVLSTRSTEKNALNTEVIKEMVN-ALNSAAADDSKLVLFSAAGSVFCCG 345
I ++KED I+ + NA + ++ +++ + + K ++ A + F G
Sbjct: 49 IDLQKEDNGIGILTLNNPSRMNAFSGVMMLQLLEKVIELENWTEGKGLIVRGAKNTFSSG 108
Query: 346 LDFGYFVRHLRNDRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDL 405
D V+ L + ++ M ++N + F++ V V G A+G GA CD
Sbjct: 109 SDLNA-VKSLGTPEDGMAVCMF--MQNTLTRFMRLPLISVALVQGWALGGGAEFTTACDF 165
Query: 406 VWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQ 465
++ + + G P + +++G A ++L KL ++ A G+V +
Sbjct: 166 RLMTPESKIRFVHKEMGIIPSWGGTTRLVEIIGSRQALKVLSGALKLDSKNALNIGMVEE 225
Query: 466 VFLTGTFT---QEVMIQIKELASYNAIVLEECKALVRCNIKLELEQANERECEVLRKIWS 522
V + T +E +K+ V+ K V +L LE+A + E ++L +W
Sbjct: 226 VLQSSDETKSLEEAQEWLKQFIQGPPEVIRALKKSVCSGRELYLEEALQNERDLLGTVWG 285
Query: 523 SAQGIESMLK 532
+E++ K
Sbjct: 286 GPANLEAIAK 295
>gi|213417737 enoyl Coenzyme A hydratase domain containing 1 isoform
5 [Homo sapiens]
Length = 307
Score = 49.3 bits (116), Expect = 9e-06
Identities = 52/250 (20%), Positives = 105/250 (42%), Gaps = 7/250 (2%)
Query: 287 IVVKKEDGFTQIVLSTRSTEKNALNTEVIKEMVN-ALNSAAADDSKLVLFSAAGSVFCCG 345
I ++KED I+ + NA + ++ +++ + + K ++ A + F G
Sbjct: 55 IDLQKEDNGIGILTLNNPSRMNAFSGVMMLQLLEKVIELENWTEGKGLIVRGAKNTFSSG 114
Query: 346 LDFGYFVRHLRNDRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDL 405
D V+ L + ++ M ++N + F++ V V G A+G GA CD
Sbjct: 115 SDLNA-VKSLGTPEDGMAVCMF--MQNTLTRFMRLPLISVALVQGWALGGGAEFTTACDF 171
Query: 406 VWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQ 465
++ + + G P + +++G A ++L KL ++ A G+V +
Sbjct: 172 RLMTPESKIRFVHKEMGIIPSWGGTTRLVEIIGSRQALKVLSGALKLDSKNALNIGMVEE 231
Query: 466 VFLTGTFT---QEVMIQIKELASYNAIVLEECKALVRCNIKLELEQANERECEVLRKIWS 522
V + T +E +K+ V+ K V +L LE+A + E ++L +W
Sbjct: 232 VLQSSDETKSLEEAQEWLKQFIQGPPEVIRALKKSVCSGRELYLEEALQNERDLLGTVWG 291
Query: 523 SAQGIESMLK 532
+E++ K
Sbjct: 292 GPANLEAIAK 301
>gi|28372505 chromobox homolog 7 [Homo sapiens]
Length = 251
Score = 47.4 bits (111), Expect = 3e-05
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 1 MASQEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMN 46
+ Q F VE+I KR K G +YLV+WKG+ + TWEPE+H+++
Sbjct: 6 IGEQVFAVESIRKKRVRK-GKVEYLVKWKGWPPKYSTWEPEEHILD 50
>gi|61743963 chromobox homolog 2 isoform 1 [Homo sapiens]
Length = 532
Score = 47.4 bits (111), Expect = 3e-05
Identities = 40/167 (23%), Positives = 77/167 (46%), Gaps = 14/167 (8%)
Query: 1 MASQEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHLMNCEKCVHDFNRRQTE 60
+ Q F E I+ KR K G +YLV+W+G+ + ++WEPE+++++ + + F +++ E
Sbjct: 7 VGEQVFAAECILSKRLRK-GKLEYLVKWRGWSSKHNSWEPEENILD-PRLLLAFQKKEHE 64
Query: 61 KQKKLTWTTTSRIFSNNARRRTSRSTKANYSKNSPKTPVTDKHHRSKNCKLFAASKNVRR 120
K+ +R R R + T + K D +SK ++S +
Sbjct: 65 KE------VQNRKRGKRPRGRPRKLTAMSSCSRRSKLKEPDAPSKSK-----SSSSSSSS 113
Query: 121 KAASTLSDTKNMEIINSTIETLAPDS-PFDHKKTVSGFQKLEKLDPI 166
++S+ SD ++ +++ ++ P KK K E DPI
Sbjct: 114 TSSSSSSDEEDDSDLDAKRGPRGRETHPVPQKKAQILVAKPELKDPI 160
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.129 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,431,935
Number of Sequences: 37866
Number of extensions: 746433
Number of successful extensions: 2284
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 2209
Number of HSP's gapped (non-prelim): 68
length of query: 541
length of database: 18,247,518
effective HSP length: 107
effective length of query: 434
effective length of database: 14,195,856
effective search space: 6161001504
effective search space used: 6161001504
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.