Guide to the Human Genome
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Name: ECHDC1 Sequence: fasta or formatted (307aa) NCBI GI: 213417737
Description:

enoyl Coenzyme A hydratase domain containing 1 isoform 5

Referenced in:

Amino Acid Catabolism
Fatty Acid Oxidation and Ketone Bodies

Other entries for this name:
alt prot [301aa] enoyl Coenzyme A hydratase domain containing 1 isoform 1
alt prot [226aa] enoyl Coenzyme A hydratase domain containing 1 isoform 3
alt prot [70aa] enoyl Coenzyme A hydratase domain containing 1 isoform 4
alt prot [145aa] enoyl Coenzyme A hydratase domain containing 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         20           1
 C cysteine            1.0          3           1
 D aspartate           2.6          8           1
 E glutamate           8.5         26           3
 F phenylalanine       3.6         11           1
 G glycine             9.8         30           3
 H histidine           1.0          3           1
 I isoleucine          4.9         15           2
 K lysine              7.8         24           2
 L leucine            13.4         41           2
 M methionine          3.9         12           2
 N asparagine          4.2         13           2
 P proline             2.9          9           2
 Q glutamine           4.6         14           2
 R arginine            3.9         12           1
 S serine              7.8         24           2
 T threonine           5.9         18           2
 V valine              5.2         16           1
 W tryptophan          1.6          5           1
 Y tyrosine            1.0          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   enoyl Coenzyme A hydratase domain containing 1 isof... 
ECHDC1                0.983   enoyl Coenzyme A hydratase domain containing 1 isof...
ECHDC1                0.730   enoyl Coenzyme A hydratase domain containing 1 isof...
ECHDC1                0.372   enoyl Coenzyme A hydratase domain containing 1 isofo...
AUH                   0.130   AU RNA binding protein/enoyl-Coenzyme A hydratase pre...
ECHDC1                0.121   enoyl Coenzyme A hydratase domain containing 1 isof...
ECHS1                 0.087   mitochondrial short-chain enoyl-coenzyme A hydratas...
ECH1                  0.081   peroxisomal enoyl-coenzyme A hydratase-like protein ...
EHHADH                0.078   enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A...
HADHA                 0.066   mitochondrial trifunctional protein, alpha subunit p...
CDYL                  0.055   chromodomain protein, Y chromosome-like isoform a [...
CDYL                  0.055   chromodomain protein, Y chromosome-like isoform d [...
CDYL                  0.055   chromodomain protein, Y chromosome-like isoform d [...
DCI                   0.052   dodecenoyl-Coenzyme A delta isomerase precursor [Hom...
CDY1                  0.048   Y chromosome chromodomain protein 1, telomeric isofor...
CDY1                  0.048   Y chromosome chromodomain protein 1, telomeric isofo...
CDY1B                 0.048   chromodomain protein, Y-linked, 1B isoform b 
CDY1B                 0.048   chromodomain protein, Y-linked, 1B isoform a 
HIBCH                 0.048   3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 2 [...
HIBCH                 0.048   3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 1 [...
ECHDC3                0.047   enoyl Coenzyme A hydratase domain containing 3 [Homo...
ECHDC2                0.047   enoyl Coenzyme A hydratase domain containing 2 [Hom...
CDY2B                 0.042   Y chromosome chromodomain protein 2B 
CDY2A                 0.042   Y chromosome chromodomain protein 2A 
CDYL2                 0.031   chromodomain protein, Y-like 2 
MYO5A                 0.017   myosin VA isoform 2 
MYO5A                 0.017   myosin VA isoform 1 
OTOF                  0.012   otoferlin isoform b 
OTOF                  0.012   otoferlin isoform d 
TNFSF13               0.009   tumor necrosis factor ligand superfamily, member 13 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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