Guide to the Human Genome
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Name: ECH1 Sequence: fasta or formatted (328aa) NCBI GI: 70995211
Description:

peroxisomal enoyl-coenzyme A hydratase-like protein

Referenced in:

Peroxisomes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.7         35           2
 C cysteine            1.8          6           1
 D aspartate           6.1         20           2
 E glutamate           4.9         16           2
 F phenylalanine       2.7          9           2
 G glycine             6.1         20           3
 H histidine           1.5          5           1
 I isoleucine          4.6         15           2
 K lysine              5.2         17           1
 L leucine             9.8         32           2
 M methionine          3.4         11           2
 N asparagine          4.0         13           1
 P proline             2.7          9           1
 Q glutamine           4.0         13           1
 R arginine            6.4         21           2
 S serine              8.5         28           2
 T threonine           4.9         16           2
 V valine              9.8         32           2
 W tryptophan          0.9          3           1
 Y tyrosine            2.1          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   peroxisomal enoyl-coenzyme A hydratase-like protein ... 
ECHS1                 0.122   mitochondrial short-chain enoyl-coenzyme A hydratas...
AUH                   0.122   AU RNA binding protein/enoyl-Coenzyme A hydratase pre...
CDYL                  0.103   chromodomain protein, Y chromosome-like isoform a [...
CDYL                  0.103   chromodomain protein, Y chromosome-like isoform d [...
CDYL                  0.103   chromodomain protein, Y chromosome-like isoform d [...
CDY1                  0.091   Y chromosome chromodomain protein 1, telomeric isofor...
CDY1                  0.091   Y chromosome chromodomain protein 1, telomeric isofo...
CDY1B                 0.091   chromodomain protein, Y-linked, 1B isoform b 
CDY1B                 0.091   chromodomain protein, Y-linked, 1B isoform a 
CDY2B                 0.090   Y chromosome chromodomain protein 2B 
CDY2A                 0.090   Y chromosome chromodomain protein 2A 
CDYL2                 0.088   chromodomain protein, Y-like 2 
HADHA                 0.085   mitochondrial trifunctional protein, alpha subunit p...
PECI                  0.085   peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Hom...
ECHDC3                0.081   enoyl Coenzyme A hydratase domain containing 3 [Homo...
EHHADH                0.077   enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A...
ECHDC1                0.077   enoyl Coenzyme A hydratase domain containing 1 isof...
ECHDC1                0.077   enoyl Coenzyme A hydratase domain containing 1 isof...
HIBCH                 0.068   3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 2 [...
HIBCH                 0.068   3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 1 [...
ECHDC2                0.067   enoyl Coenzyme A hydratase domain containing 2 [Hom...
ECHDC1                0.059   enoyl Coenzyme A hydratase domain containing 1 isof...
DCI                   0.049   dodecenoyl-Coenzyme A delta isomerase precursor [Hom...
PECI                  0.047   peroxisomal D3,D2-enoyl-CoA isomerase isoform 2 [Hom...
KCTD6                 0.007   potassium channel tetramerisation domain containing...
KCTD6                 0.007   potassium channel tetramerisation domain containing...
MEN1                  0.007   menin isoform 1 
MEN1                  0.007   menin isoform 1 
MEN1                  0.007   menin isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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