BAP1 30554

Name: BAP1	Sequence: fasta or formatted (729aa)		NCBI GI: 4757836
Description: BRCA1 associated protein-1		Referenced in: Ubiquitin and Related Protein Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.0 51 2 C cysteine 1.1 8 1 D aspartate 5.5 40 3 E glutamate 8.0 58 3 F phenylalanine 2.6 19 2 G glycine 6.6 48 2 H histidine 2.6 19 1 I isoleucine 4.4 32 1 K lysine 6.2 45 2 L leucine 9.1 66 2 M methionine 1.4 10 1 N asparagine 4.1 30 2 P proline 7.5 55 2 Q glutamine 4.1 30 2 R arginine 6.4 47 3 S serine 9.6 70 3 T threonine 4.3 31 1 V valine 6.9 50 2 W tryptophan 0.5 4 1 Y tyrosine 2.2 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 BRCA1 associated protein-1 UCHL5 0.112 ubiquitin carboxyl-terminal hydrolase L5 UCHL3 0.031 ubiquitin carboxyl-terminal esterase L3 UCHL1 0.024 ubiquitin carboxyl-terminal esterase L1 MAGEC1 0.013 melanoma antigen family C, 1 NEFH 0.011 neurofilament, heavy polypeptide 200kDa MED15 0.011 mediator complex subunit 15 isoform b OS9 0.011 osteosarcoma amplified 9 isoform 4 precursor MED15 0.010 mediator complex subunit 15 isoform a LIPE 0.010 hormone-sensitive lipase TGOLN2 0.010 trans-golgi network protein 2 OS9 0.010 osteosarcoma amplified 9 isoform 3 precursor BSN 0.010 bassoon protein KIAA1217 0.010 sickle tail isoform 3 KIAA1217 0.010 sickle tail isoform 2 BRSK2 0.010 BR serine/threonine kinase 2 FAM65A 0.009 hypothetical protein LOC79567 NES 0.008 nestin RTN4 0.008 reticulon 4 isoform B RTN4 0.008 reticulon 4 isoform D RTN4 0.008 reticulon 4 isoform A FOXC1 0.008 forkhead box C1 SDC3 0.008 syndecan 3 FLJ22184 0.008 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.008 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.008 PREDICTED: hypothetical protein LOC80164 SETD1A 0.008 SET domain containing 1A BDP1 0.008 transcription factor-like nuclear regulator KIAA0754 0.008 hypothetical protein LOC643314 CREBBP 0.008 CREB binding protein isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.