Guide to the Human Genome
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Name: GZMK Sequence: fasta or formatted (264aa) NCBI GI: 4504235
Description:

granzyme K precursor

Referenced in:

Serine Proteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         13           2
 C cysteine            3.4          9           1
 D aspartate           4.2         11           1
 E glutamate           2.3          6           1
 F phenylalanine       4.2         11           2
 G glycine             8.7         23           2
 H histidine           4.2         11           2
 I isoleucine          5.3         14           2
 K lysine              9.1         24           2
 L leucine             7.6         20           2
 M methionine          2.7          7           1
 N asparagine          3.0          8           1
 P proline             4.9         13           2
 Q glutamine           3.8         10           1
 R arginine            3.0          8           1
 S serine              9.5         25           2
 T threonine           8.0         21           1
 V valine              7.6         20           2
 W tryptophan          1.1          3           1
 Y tyrosine            2.7          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   granzyme K precursor 
GZMA                  0.357   granzyme A precursor 
CFD                   0.290   complement factor D preproprotein 
KLK13                 0.259   kallikrein 13 precursor 
GZMM                  0.251   granzyme M precursor 
GZMH                  0.251   granzyme H 
KLK8                  0.248   kallikrein 8 isoform 1 preproprotein 
KLK8                  0.246   kallikrein 8 isoform 2 
PRSS8                 0.244   prostasin preproprotein 
KLK11                 0.242   kallikrein 11 isoform 1 preproprotein 
KLK11                 0.242   kallikrein 11 isoform 2 precursor 
KLK11                 0.242   kallikrein 11 isoform 1 preproprotein 
KLK14                 0.236   kallikrein 14 preproprotein 
KLK3                  0.232   prostate specific antigen isoform 1 preproprotein [Ho...
PRSS1                 0.232   protease, serine, 1 preproprotein 
CTSG                  0.228   cathepsin G preproprotein 
KLK6                  0.228   kallikrein-related peptidase 6 isoform A preproprote...
KLK6                  0.228   kallikrein-related peptidase 6 isoform A preproprotei...
KLK2                  0.226   kallikrein 2, prostatic isoform 1 
PRSS3                 0.226   mesotrypsin isoform 1 preproprotein 
PRSS3                 0.226   mesotrypsin isoform 2 preproprotein 
KLK15                 0.226   kallikrein-related peptidase 15 isoform 4 preproprot...
GZMB                  0.225   granzyme B precursor 
KLK4                  0.225   kallikrein-related peptidase 4 preproprotein 
TMPRSS3               0.225   transmembrane protease, serine 3 isoform 1 
PRSSL1                0.225   protease, serine-like 1 
OVCH1                 0.223   ovochymase 1 
TMPRSS5               0.221   transmembrane protease, serine 5 
PLG                   0.219   plasminogen 
HGFAC                 0.219   HGF activator preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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