Guide to the Human Genome
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Name: PRSS1 Sequence: fasta or formatted (247aa) NCBI GI: 4506145
Description:

protease, serine, 1 preproprotein

Referenced in:

Pancreas and Insulin
Serine Proteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         20           3
 C cysteine            4.0         10           1
 D aspartate           4.9         12           4
 E glutamate           4.0         10           2
 F phenylalanine       2.4          6           1
 G glycine             9.7         24           2
 H histidine           1.6          4           1
 I isoleucine          6.5         16           2
 K lysine              5.7         14           1
 L leucine             7.3         18           2
 M methionine          1.2          3           1
 N asparagine          7.3         18           2
 P proline             4.9         12           2
 Q glutamine           4.5         11           1
 R arginine            2.4          6           1
 S serine              8.1         20           2
 T threonine           4.0         10           1
 V valine              7.7         19           2
 W tryptophan          1.6          4           1
 Y tyrosine            4.0         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protease, serine, 1 preproprotein 
PRSS2                 0.893   protease, serine, 2 preproprotein 
PRSS3                 0.873   mesotrypsin isoform 2 preproprotein 
PRSS3                 0.834   mesotrypsin isoform 1 preproprotein 
KLK15                 0.398   kallikrein-related peptidase 15 isoform 4 preproprot...
KLK5                  0.398   kallikrein-related peptidase 5 preproprotein 
KLK5                  0.398   kallikrein-related peptidase 5 preproprotein 
KLK5                  0.398   kallikrein-related peptidase 5 preproprotein 
KLK14                 0.393   kallikrein 14 preproprotein 
KLK6                  0.385   kallikrein-related peptidase 6 isoform A preproprote...
KLK6                  0.385   kallikrein-related peptidase 6 isoform A preproprotei...
KLK1                  0.381   kallikrein 1 preproprotein 
KLK11                 0.381   kallikrein 11 isoform 2 precursor 
KLK11                 0.379   kallikrein 11 isoform 1 preproprotein 
KLK11                 0.379   kallikrein 11 isoform 1 preproprotein 
KLK8                  0.379   kallikrein 8 isoform 2 
KLK8                  0.379   kallikrein 8 isoform 1 preproprotein 
KLK2                  0.375   kallikrein 2, prostatic isoform 1 
KLK13                 0.367   kallikrein 13 precursor 
KLK3                  0.361   prostate specific antigen isoform 1 preproprotein [Ho...
KLK7                  0.357   stratum corneum chymotryptic enzyme preproprotein [H...
KLK7                  0.357   stratum corneum chymotryptic enzyme preproprotein [Ho...
KLK12                 0.340   kallikrein 12 isoform 2 
KLK9                  0.334   kallikrein-related peptidase 9 
KLK12                 0.322   kallikrein 12 isoform 1 
KLK4                  0.320   kallikrein-related peptidase 4 preproprotein 
TMPRSS9               0.314   transmembrane protease, serine 9 
KLK10                 0.311   kallikrein-related peptidase 10 preproprotein [Homo...
KLK10                 0.311   kallikrein-related peptidase 10 preproprotein 
KLK10                 0.311   kallikrein-related peptidase 10 preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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