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Search of human proteins with 47086907
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|47086907 lysophosphatidylcholine acyltransferase 2 [Homo
sapiens]
(544 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|47086907 lysophosphatidylcholine acyltransferase 2 [Homo sapi... 1088 0.0
gi|33946291 lysophosphatidylcholine acyltransferase 1 [Homo sapi... 441 e-124
gi|87116681 lysophosphatidylcholine acyltransferase 4 [Homo sapi... 375 e-104
gi|21362092 1-acylglycerol-3-phosphate O-acyltransferase 9 [Homo... 67 4e-11
gi|22212896 protein phosphatase 3 regulatory subunit B, beta iso... 66 7e-11
gi|7705419 hippocalcin-like protein 4 [Homo sapiens] 63 6e-10
gi|30520329 lysophosphatidic acid acyltransferase zeta precursor... 62 1e-09
gi|4506025 protein phosphatase 3, regulatory subunit B, alpha is... 62 1e-09
gi|21361559 visinin-like 1 [Homo sapiens] 61 2e-09
gi|40254415 guanylate cyclase activator 1A (retina) [Homo sapiens] 59 9e-09
gi|19913446 hippocalcin [Homo sapiens] 59 1e-08
gi|98985795 neurocalcin delta [Homo sapiens] 59 1e-08
gi|98985793 neurocalcin delta [Homo sapiens] 59 1e-08
gi|98985791 neurocalcin delta [Homo sapiens] 59 1e-08
gi|98985789 neurocalcin delta [Homo sapiens] 59 1e-08
gi|98985787 neurocalcin delta [Homo sapiens] 59 1e-08
gi|98985785 neurocalcin delta [Homo sapiens] 59 1e-08
gi|98985783 neurocalcin delta [Homo sapiens] 59 1e-08
gi|98985778 neurocalcin delta [Homo sapiens] 59 1e-08
gi|19913443 hippocalcin-like 1 [Homo sapiens] 57 3e-08
gi|19913441 hippocalcin-like 1 [Homo sapiens] 57 3e-08
gi|239751420 PREDICTED: similar to hCG2039376 [Homo sapiens] 57 4e-08
gi|22550104 ubiquitin specific protease 32 [Homo sapiens] 57 4e-08
gi|27886676 Kv channel interacting protein 2 isoform 5 [Homo sap... 55 1e-07
gi|27886678 Kv channel interacting protein 2 isoform 6 [Homo sap... 55 1e-07
gi|27886672 Kv channel interacting protein 2 isoform 3 [Homo sap... 55 1e-07
gi|27886674 Kv channel interacting protein 2 isoform 4 [Homo sap... 55 1e-07
gi|21361460 Kv channel interacting protein 2 isoform 1 [Homo sap... 55 1e-07
gi|27886670 Kv channel interacting protein 2 isoform 2 [Homo sap... 55 1e-07
gi|78190488 Kv channel interacting protein 4 isoform 3 [Homo sap... 55 1e-07
>gi|47086907 lysophosphatidylcholine acyltransferase 2 [Homo
sapiens]
Length = 544
Score = 1088 bits (2815), Expect = 0.0
Identities = 544/544 (100%), Positives = 544/544 (100%)
Query: 1 MSRCAQAAEVAATVPGAGVGNVGLRPPMVPRQASFFPPPVPNPFVQQTQIGSARRVQIVL 60
MSRCAQAAEVAATVPGAGVGNVGLRPPMVPRQASFFPPPVPNPFVQQTQIGSARRVQIVL
Sbjct: 1 MSRCAQAAEVAATVPGAGVGNVGLRPPMVPRQASFFPPPVPNPFVQQTQIGSARRVQIVL 60
Query: 61 LGIILLPIRVLLVALILLLAWPFAAISTVCCPEKLTHPITGWRRKITQTALKFLGRAMFF 120
LGIILLPIRVLLVALILLLAWPFAAISTVCCPEKLTHPITGWRRKITQTALKFLGRAMFF
Sbjct: 61 LGIILLPIRVLLVALILLLAWPFAAISTVCCPEKLTHPITGWRRKITQTALKFLGRAMFF 120
Query: 121 SMGFIVAVKGKIASPLEAPVFVAAPHSTFFDGIACVVAGLPSMVSRNENAQVPLIGRLLR 180
SMGFIVAVKGKIASPLEAPVFVAAPHSTFFDGIACVVAGLPSMVSRNENAQVPLIGRLLR
Sbjct: 121 SMGFIVAVKGKIASPLEAPVFVAAPHSTFFDGIACVVAGLPSMVSRNENAQVPLIGRLLR 180
Query: 181 AVQPVLVSRVDPDSRKNTINEIIKRTTSGGEWPQILVFPEGTCTNRSCLITFKPGAFIPG 240
AVQPVLVSRVDPDSRKNTINEIIKRTTSGGEWPQILVFPEGTCTNRSCLITFKPGAFIPG
Sbjct: 181 AVQPVLVSRVDPDSRKNTINEIIKRTTSGGEWPQILVFPEGTCTNRSCLITFKPGAFIPG 240
Query: 241 VPVQPVLLRYPNKLDTVTWTWQGYTFIQLCMLTFCQLFTKVEVEFMPVQVPNDEEKNDPV 300
VPVQPVLLRYPNKLDTVTWTWQGYTFIQLCMLTFCQLFTKVEVEFMPVQVPNDEEKNDPV
Sbjct: 241 VPVQPVLLRYPNKLDTVTWTWQGYTFIQLCMLTFCQLFTKVEVEFMPVQVPNDEEKNDPV 300
Query: 301 LFANKVRNLMAEALGIPVTDHTYEDCRLMISAGQLTLPMEAGLVEFTKISRKLKLDWDGV 360
LFANKVRNLMAEALGIPVTDHTYEDCRLMISAGQLTLPMEAGLVEFTKISRKLKLDWDGV
Sbjct: 301 LFANKVRNLMAEALGIPVTDHTYEDCRLMISAGQLTLPMEAGLVEFTKISRKLKLDWDGV 360
Query: 361 RKHLDEYASIASSSKGGRIGIEEFAKYLKLPVSDVLRQLFALFDRNHDGSIDFREYVIGL 420
RKHLDEYASIASSSKGGRIGIEEFAKYLKLPVSDVLRQLFALFDRNHDGSIDFREYVIGL
Sbjct: 361 RKHLDEYASIASSSKGGRIGIEEFAKYLKLPVSDVLRQLFALFDRNHDGSIDFREYVIGL 420
Query: 421 AVLCNPSNTEEIIQVAFKLFDVDEDGYITEEEFSTILQASLGVPDLDVSGLFKEIAQGDS 480
AVLCNPSNTEEIIQVAFKLFDVDEDGYITEEEFSTILQASLGVPDLDVSGLFKEIAQGDS
Sbjct: 421 AVLCNPSNTEEIIQVAFKLFDVDEDGYITEEEFSTILQASLGVPDLDVSGLFKEIAQGDS 480
Query: 481 ISYEEFKSFALKHPEYAKIFTTYLDLQTCHVFSLPKEVQTTPSTASNKVSPEKHEESTSD 540
ISYEEFKSFALKHPEYAKIFTTYLDLQTCHVFSLPKEVQTTPSTASNKVSPEKHEESTSD
Sbjct: 481 ISYEEFKSFALKHPEYAKIFTTYLDLQTCHVFSLPKEVQTTPSTASNKVSPEKHEESTSD 540
Query: 541 KKDD 544
KKDD
Sbjct: 541 KKDD 544
>gi|33946291 lysophosphatidylcholine acyltransferase 1 [Homo
sapiens]
Length = 534
Score = 441 bits (1135), Expect = e-124
Identities = 218/469 (46%), Positives = 318/469 (67%), Gaps = 4/469 (0%)
Query: 33 ASFFPPPVPNPFVQQTQIGSARRVQIVLLGIILLPIRVLLVALILLLAWPFAAISTVCCP 92
A PP NPFV + ++ + ++ Q+ L+ + L P+R+L+ A ++LLAWP A ++++
Sbjct: 21 ARLLAPPGRNPFVHELRLSALQKAQVALMTLTLFPVRLLVAAAMMLLAWPLALVASLGSA 80
Query: 93 EKLTHPITGWRRKITQTALKFLGRAMFFSMGFI-VAVKGKIASPLEAPVFVAAPHSTFFD 151
EK RK+ LK + R M+F+ GF VAVKG+ A P EA + APHS++FD
Sbjct: 81 EKEPEQPPALWRKVVDFLLKAIMRTMWFAGGFHRVAVKGRQALPTEAAILTLAPHSSYFD 140
Query: 152 GIACVVAGLPSMVSRNENAQVPLIGRLLRAVQPVLVSRVDPDSRKNTINEIIKRTTSGGE 211
I V + S+V + E+ +P+ G L++ ++PV VSR D DSR+ T+ EI +R S G+
Sbjct: 141 AIP-VTMTMSSIVMKAESRDIPIWGTLIQYIRPVFVSRSDQDSRRKTVEEIKRRAQSNGK 199
Query: 212 WPQILVFPEGTCTNRSCLITFKPGAFIPGVPVQPVLLRYPNKLDTVTWTWQGYTFIQLCM 271
WPQI++FPEGTCTNR+CLITFKPGAFIPG PVQPV+LRYPNKLDT+TWTWQG +++
Sbjct: 200 WPQIMIFPEGTCTNRTCLITFKPGAFIPGAPVQPVVLRYPNKLDTITWTWQGPGALEILW 259
Query: 272 LTFCQLFTKVEVEFMPVQVPNDEEKNDPVLFANKVRNLMAEALGIPVTDHTYEDCRLMIS 331
LT CQ +VE+EF+PV P++EEK +P L+A+ VR +MAEALG+ VTD+T+EDC+L ++
Sbjct: 260 LTLCQFHNQVEIEFLPVYSPSEEEKRNPALYASNVRRVMAEALGVSVTDYTFEDCQLALA 319
Query: 332 AGQLTLPMEAGLVEFTKISRKLKLDWDGVRKHLDEYASIASSSKGGRIGIEEFAKYLKLP 391
GQL LP + L+EF ++ R L L + + K LD Y+ A G +IGI EFA L++P
Sbjct: 320 EGQLRLPADTCLLEFARLVRGLGLKPEKLEKDLDRYSERARMKGGEKIGIAEFAASLEVP 379
Query: 392 VSDVLRQLFALFDRNHDGSIDFREYVIGLAVLCNPSNTEEIIQVAFKLFDVDEDGYITEE 451
VSD+L +F+LFD + G +D RE V+ L+V+C P+ T + IQ+AFK++ EDG + E
Sbjct: 380 VSDLLEDMFSLFDESGSGEVDLRECVVALSVVCRPARTLDTIQLAFKMYGAQEDGSVGEG 439
Query: 452 EFSTILQASLGVPDLDVSGLFKEIAQGD--SISYEEFKSFALKHPEYAK 498
+ S IL+ +LGV +L V+ LF+ I Q + I++ +F FA +P +A+
Sbjct: 440 DLSCILKTALGVAELTVTDLFRAIDQEEKGKITFADFHRFAEMYPAFAE 488
>gi|87116681 lysophosphatidylcholine acyltransferase 4 [Homo
sapiens]
Length = 524
Score = 375 bits (963), Expect = e-104
Identities = 207/477 (43%), Positives = 290/477 (60%), Gaps = 16/477 (3%)
Query: 37 PPPVPNPFVQQTQIGSARRVQIVLLGIILLPIRVLLVALILLLAWPFAAISTV-CCPEKL 95
PP PNPFV + + +RV+ LLG +L PIRVLL ++L L WPFA + E+L
Sbjct: 18 PPASPNPFVHELHLSRLQRVKFCLLGALLAPIRVLLAFIVLFLLWPFAWLQVAGLSEEQL 77
Query: 96 THPITGWRRKITQTALKFLGRAMFFSMGFI-VAVKGKIASPLEAPVFVAAPHSTFFDGIA 154
PITGWR+ + + L R +FF +GF+ + V+G+ AS L+APV VAAPHSTFFD I
Sbjct: 78 QEPITGWRKTVCHNGVLGLSRLLFFLLGFLRIRVRGQRASRLQAPVLVAAPHSTFFDPIV 137
Query: 155 CVVAGLPSMVSRNENAQVPLIGRLLRAVQPVLVSRVDPDSRKNTINEIIKRTTSGGEWPQ 214
+ LP +VSR EN VP+IG LLR Q +LVSR DP SR+ + E+ +R TSGG+WPQ
Sbjct: 138 LLPCDLPKVVSRAENLSVPVIGALLRFNQAILVSRHDPASRRRVVEEVRRRATSGGKWPQ 197
Query: 215 ILVFPEGTCTNRSCLITFKPGAFIPGVPVQPVLLRYPNKLDTVTWTWQGYTFIQLCMLTF 274
+L FPEGTC+N+ L+ FKPGAFI GVPVQPVL+RYPN LDT +W W+G +++ LT
Sbjct: 198 VLFFPEGTCSNKKALLKFKPGAFIAGVPVQPVLIRYPNSLDTTSWAWRGPGVLKVLWLTA 257
Query: 275 CQLFTKVEVEFMPVQVPNDEEKNDPVLFANKVRNLMAEALGIPVTDHTYEDCRLMISAGQ 334
Q + V+VEF+PV P+ EE DP L+AN V+ +MA+ALGIP T+ + +I G+
Sbjct: 258 SQPCSIVDVEFLPVYHPSPEESRDPTLYANNVQRVMAQALGIPATECEFVGSLPVIVVGR 317
Query: 335 LTLPMEAGLVEFTKISRKLKLDWDGVRKHLDEYASIASSSKGGRIGIEEFAKYLKLPVSD 394
L + +E L E K+ RK L V + A + I EEFA+ L+L
Sbjct: 318 LKVALEPQLWELGKVLRKAGLSAGYV-------DAGAEPGRSRMISQEEFARQLQLSDPQ 370
Query: 395 VLRQLFALFDRNHDGSIDFREYVIGLAVLCNPSNTEEIIQVAFKLFDVDE----DGYITE 450
+ F F ++ G +DFR+ + LA L + EE+ ++AF+LF ++ + + +
Sbjct: 371 TVAGAFGYFQQDTKGLVDFRDVALALAALDGGRSLEELTRLAFELFAEEQAEGPNRLLYK 430
Query: 451 EEFSTILQASLGVPDLDVSGLFKEIAQGDS---ISYEEFKSFALKHPEYAKIFTTYL 504
+ FSTIL LG P + L E+ Q S +S +F++F+L P Y K+F+TYL
Sbjct: 431 DGFSTILHLLLGSPHPAATALHAELCQAGSSQGLSLCQFQNFSLHDPLYGKLFSTYL 487
>gi|21362092 1-acylglycerol-3-phosphate O-acyltransferase 9 [Homo
sapiens]
Length = 434
Score = 67.0 bits (162), Expect = 4e-11
Identities = 65/267 (24%), Positives = 116/267 (43%), Gaps = 19/267 (7%)
Query: 52 SARRVQIVLLGII-----LLPIRVLLVALILLLAWPFAAISTVCCPEKLTHPITGWRRKI 106
S R + +LG+I LLP+RV L + + L I T + + W ++
Sbjct: 138 SLRLTMVWVLGVIVRYCVLLPLRVTLAFIGISLL----VIGTTLVGQLPDSSLKNWLSEL 193
Query: 107 TQ-TALKFLGRAMFFSMGFIVAVKGKIASPLEAPVFVAAPHSTFFDGIACVVAGLPSMVS 165
T + RA+ ++ + K P + + VA H++ D + G +MV
Sbjct: 194 VHLTCCRICVRALSGTIHY----HNKQYRPQKGGICVAN-HTSPIDVLILTTDGCYAMVG 248
Query: 166 RNENAQVPLIGR-LLRAVQPVLVSRVDPDSRKNTINEIIKRTTSGGEWPQILVFPEGTCT 224
+ + +I R +++A V R + R + + + +K + + IL+FPEGTC
Sbjct: 249 QVHGGLMGIIQRAMVKACPHVWFERSEMKDR-HLVTKRLKEHIADKKKLPILIFPEGTCI 307
Query: 225 NRSCLITFKPGAFIPGVPVQPVLLRYPNKLDTVTWTWQGYTFIQLCMLTFCQLFTKVEVE 284
N + ++ FK G+F G + PV ++Y + W Y + + +V
Sbjct: 308 NNTSVMMFKKGSFEIGGTIHPVAIKYNPQFGDAFWNSSKYNMVSYLLRMMTSWAIVCDVW 367
Query: 285 FMPVQVPNDEEKNDPVLFANKVRNLMA 311
+MP EE D V FAN+V++ +A
Sbjct: 368 YMPPM--TREEGEDAVQFANRVKSAIA 392
>gi|22212896 protein phosphatase 3 regulatory subunit B, beta
isoform [Homo sapiens]
Length = 173
Score = 66.2 bits (160), Expect = 7e-11
Identities = 36/122 (29%), Positives = 69/122 (56%), Gaps = 8/122 (6%)
Query: 375 KGGRIGIEEFAKYLKLPVSDVLRQLFALFDRNHDGSIDFREYVIGLAVLCNPSNTEEIIQ 434
K G + +EEF +L + ++R++ +FD + DG +DF+E+++G + + E+ ++
Sbjct: 37 KSGSLSVEEFMSLPELRHNPLVRRVIDVFDTDGDGEVDFKEFILGTSQFSVKGDEEQKLR 96
Query: 435 VAFKLFDVDEDGYITEEEFSTILQASLG--VPDLDVSGLFKEI-----AQGD-SISYEEF 486
AF ++D+D+DGYI+ E +L+ +G + D + L + GD IS+EEF
Sbjct: 97 FAFSIYDMDKDGYISNGELFQVLKMMVGNNLTDWQLQQLVDKTIIILDKDGDGKISFEEF 156
Query: 487 KS 488
+
Sbjct: 157 SA 158
>gi|7705419 hippocalcin-like protein 4 [Homo sapiens]
Length = 191
Score = 63.2 bits (152), Expect = 6e-10
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 32/174 (18%)
Query: 343 LVEFTKISRKLKLDWDGVRKHLDEYASIASSSKGGRIGIEEFAK-YLKL----PVSDVLR 397
LV+ T+ S + W Y G + +EEF + Y+K S +
Sbjct: 16 LVQNTEFSEQELKQW---------YKGFLKDCPSGILNLEEFQQLYIKFFPYGDASKFAQ 66
Query: 398 QLFALFDRNHDGSIDFREYVIGLAVLCNPSNTEEIIQVAFKLFDVDEDGYITEEEFSTIL 457
F FD+N DG+IDFRE++ L+V S E+ + AF+++D+D DG IT E I+
Sbjct: 67 HAFRTFDKNGDGTIDFREFICALSVTSRGS-FEQKLNWAFEMYDLDGDGRITRLEMLEII 125
Query: 458 QASLGV---------------PDLDVSGLFKEIAQ--GDSISYEEFKSFALKHP 494
+A + P V +FK++ Q D I+ EEFK A P
Sbjct: 126 EAIYKMVGTVIMMRMNQDGLTPQQRVDKIFKKMDQDKDDQITLEEFKEAAKSDP 179
>gi|30520329 lysophosphatidic acid acyltransferase zeta precursor
[Homo sapiens]
Length = 456
Score = 62.0 bits (149), Expect = 1e-09
Identities = 45/174 (25%), Positives = 76/174 (43%), Gaps = 4/174 (2%)
Query: 144 APHSTFFDGIACVVAGLPSMVSRNENAQVPLIGR-LLRAVQPVLVSRVDPDSRKNTINEI 202
A H++ D I G +MV + + +I R +++A V R + R +
Sbjct: 246 ANHTSPIDVIILASDGYYAMVGQVHGGLMGVIQRAMVKACPHVWFERSEVKDRHLVAKRL 305
Query: 203 IKRTTSGGEWPQILVFPEGTCTNRSCLITFKPGAFIPGVPVQPVLLRYPNKLDTVTWTWQ 262
+ + P IL+FPEGTC N + ++ FK G+F G V PV ++Y + W
Sbjct: 306 TEHVQDKSKLP-ILIFPEGTCINNTSVMMFKKGSFEIGATVYPVAIKYDPQFGDAFWNSS 364
Query: 263 GYTFIQLCMLTFCQLFTKVEVEFMPVQVPNDEEKNDPVLFANKVRNLMAEALGI 316
Y + + V ++P +E D V FAN+V++ +A G+
Sbjct: 365 KYGMVTYLLRMMTSWAIVCSVWYLPPMTREADE--DAVQFANRVKSAIARQGGL 416
>gi|4506025 protein phosphatase 3, regulatory subunit B, alpha
isoform 1 [Homo sapiens]
Length = 170
Score = 62.0 bits (149), Expect = 1e-09
Identities = 33/118 (27%), Positives = 68/118 (57%), Gaps = 8/118 (6%)
Query: 377 GRIGIEEFAKYLKLPVSDVLRQLFALFDRNHDGSIDFREYVIGLAVLCNPSNTEEIIQVA 436
G + +EEF +L + +++++ +FD + +G +DF+E++ G++ + E+ ++ A
Sbjct: 36 GSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFA 95
Query: 437 FKLFDVDEDGYITEEEFSTILQASLG--VPDLDVSGLF-KEIAQGDS-----ISYEEF 486
F+++D+D+DGYI+ E +L+ +G + D + + K I D IS+EEF
Sbjct: 96 FRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEF 153
>gi|21361559 visinin-like 1 [Homo sapiens]
Length = 191
Score = 61.2 bits (147), Expect = 2e-09
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 23/150 (15%)
Query: 367 YASIASSSKGGRIGIEEFAK-YLKL----PVSDVLRQLFALFDRNHDGSIDFREYVIGLA 421
Y GR+ +EEF + Y+K S + F FD+N DG+IDFRE++ L+
Sbjct: 31 YKGFLKDCPSGRLNLEEFQQLYVKFFPYGDASKFAQHAFRTFDKNGDGTIDFREFICALS 90
Query: 422 VLCNPSNTEEIIQVAFKLFDVDEDGYITEEEFSTILQASLGV---------------PDL 466
+ S E+ + AF ++D+D DG IT E I++A + P+
Sbjct: 91 ITSRGS-FEQKLNWAFNMYDLDGDGKITRVEMLEIIEAIYKMVGTVIMMKMNEDGLTPEQ 149
Query: 467 DVSGLFKEIAQG--DSISYEEFKSFALKHP 494
V +F ++ + D I+ +EFK A P
Sbjct: 150 RVDKIFSKMDKNKDDQITLDEFKEAAKSDP 179
>gi|40254415 guanylate cyclase activator 1A (retina) [Homo sapiens]
Length = 201
Score = 59.3 bits (142), Expect = 9e-09
Identities = 48/156 (30%), Positives = 70/156 (44%), Gaps = 17/156 (10%)
Query: 367 YASIASSSKGGRIGIEEFAKYLKLP-----VSDVLRQLFALFDRNHDGSIDFREYVIGLA 421
Y + G++ + EF ++ L S + Q+F FD N DG IDF EYV L+
Sbjct: 22 YKKFMTECPSGQLTLYEFRQFFGLKNLSPSASQYVEQMFETFDFNKDGYIDFMEYVAALS 81
Query: 422 VLCNPSNTEEIIQVAFKLFDVDEDGYITEEEFSTILQASLGV-PDLDVSGLFKEI----- 475
++ E+ ++ FKL+DVD +G I +E TI+QA + P D + +E
Sbjct: 82 LVLK-GKVEQKLRWYFKLYDVDGNGCIDRDELLTIIQAIRAINPCSDTTMTAEEFTDTVF 140
Query: 476 ----AQGD-SISYEEFKSFALKHPEYAKIFTTYLDL 506
GD +S EEF K T LDL
Sbjct: 141 SKIDVNGDGELSLEEFIEGVQKDQMLLDTLTRSLDL 176
>gi|19913446 hippocalcin [Homo sapiens]
Length = 193
Score = 58.9 bits (141), Expect = 1e-08
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 6/98 (6%)
Query: 367 YASIASSSKGGRIGIEEFAKYLK--LPVSDVLR---QLFALFDRNHDGSIDFREYVIGLA 421
Y G + ++EF K P D + +F FD N DG+IDFRE++I L+
Sbjct: 31 YKGFLKDCPTGILNVDEFKKIYANFFPYGDASKFAEHVFRTFDTNSDGTIDFREFIIALS 90
Query: 422 VLCNPSNTEEIIQVAFKLFDVDEDGYITEEEFSTILQA 459
V + E+ + AF ++D+D +GYI+ EE I+QA
Sbjct: 91 V-TSRGRLEQKLMWAFSMYDLDGNGYISREEMLEIVQA 127
>gi|98985795 neurocalcin delta [Homo sapiens]
Length = 193
Score = 58.5 bits (140), Expect = 1e-08
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 367 YASIASSSKGGRIGIEEFAKYLK--LPVSDVLR---QLFALFDRNHDGSIDFREYVIGLA 421
Y G + +EEF K P D + +F FD N DG+IDFRE++I L+
Sbjct: 31 YKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALS 90
Query: 422 VLCNPSNTEEIIQVAFKLFDVDEDGYITEEEFSTILQA 459
V + E+ ++ AF ++D+D +GYI++ E I+QA
Sbjct: 91 V-TSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQA 127
>gi|98985793 neurocalcin delta [Homo sapiens]
Length = 193
Score = 58.5 bits (140), Expect = 1e-08
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 367 YASIASSSKGGRIGIEEFAKYLK--LPVSDVLR---QLFALFDRNHDGSIDFREYVIGLA 421
Y G + +EEF K P D + +F FD N DG+IDFRE++I L+
Sbjct: 31 YKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALS 90
Query: 422 VLCNPSNTEEIIQVAFKLFDVDEDGYITEEEFSTILQA 459
V + E+ ++ AF ++D+D +GYI++ E I+QA
Sbjct: 91 V-TSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQA 127
>gi|98985791 neurocalcin delta [Homo sapiens]
Length = 193
Score = 58.5 bits (140), Expect = 1e-08
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 367 YASIASSSKGGRIGIEEFAKYLK--LPVSDVLR---QLFALFDRNHDGSIDFREYVIGLA 421
Y G + +EEF K P D + +F FD N DG+IDFRE++I L+
Sbjct: 31 YKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALS 90
Query: 422 VLCNPSNTEEIIQVAFKLFDVDEDGYITEEEFSTILQA 459
V + E+ ++ AF ++D+D +GYI++ E I+QA
Sbjct: 91 V-TSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQA 127
>gi|98985789 neurocalcin delta [Homo sapiens]
Length = 193
Score = 58.5 bits (140), Expect = 1e-08
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 367 YASIASSSKGGRIGIEEFAKYLK--LPVSDVLR---QLFALFDRNHDGSIDFREYVIGLA 421
Y G + +EEF K P D + +F FD N DG+IDFRE++I L+
Sbjct: 31 YKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALS 90
Query: 422 VLCNPSNTEEIIQVAFKLFDVDEDGYITEEEFSTILQA 459
V + E+ ++ AF ++D+D +GYI++ E I+QA
Sbjct: 91 V-TSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQA 127
>gi|98985787 neurocalcin delta [Homo sapiens]
Length = 193
Score = 58.5 bits (140), Expect = 1e-08
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 367 YASIASSSKGGRIGIEEFAKYLK--LPVSDVLR---QLFALFDRNHDGSIDFREYVIGLA 421
Y G + +EEF K P D + +F FD N DG+IDFRE++I L+
Sbjct: 31 YKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALS 90
Query: 422 VLCNPSNTEEIIQVAFKLFDVDEDGYITEEEFSTILQA 459
V + E+ ++ AF ++D+D +GYI++ E I+QA
Sbjct: 91 V-TSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQA 127
>gi|98985785 neurocalcin delta [Homo sapiens]
Length = 193
Score = 58.5 bits (140), Expect = 1e-08
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 367 YASIASSSKGGRIGIEEFAKYLK--LPVSDVLR---QLFALFDRNHDGSIDFREYVIGLA 421
Y G + +EEF K P D + +F FD N DG+IDFRE++I L+
Sbjct: 31 YKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALS 90
Query: 422 VLCNPSNTEEIIQVAFKLFDVDEDGYITEEEFSTILQA 459
V + E+ ++ AF ++D+D +GYI++ E I+QA
Sbjct: 91 V-TSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQA 127
>gi|98985783 neurocalcin delta [Homo sapiens]
Length = 193
Score = 58.5 bits (140), Expect = 1e-08
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 367 YASIASSSKGGRIGIEEFAKYLK--LPVSDVLR---QLFALFDRNHDGSIDFREYVIGLA 421
Y G + +EEF K P D + +F FD N DG+IDFRE++I L+
Sbjct: 31 YKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALS 90
Query: 422 VLCNPSNTEEIIQVAFKLFDVDEDGYITEEEFSTILQA 459
V + E+ ++ AF ++D+D +GYI++ E I+QA
Sbjct: 91 V-TSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQA 127
>gi|98985778 neurocalcin delta [Homo sapiens]
Length = 193
Score = 58.5 bits (140), Expect = 1e-08
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 367 YASIASSSKGGRIGIEEFAKYLK--LPVSDVLR---QLFALFDRNHDGSIDFREYVIGLA 421
Y G + +EEF K P D + +F FD N DG+IDFRE++I L+
Sbjct: 31 YKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALS 90
Query: 422 VLCNPSNTEEIIQVAFKLFDVDEDGYITEEEFSTILQA 459
V + E+ ++ AF ++D+D +GYI++ E I+QA
Sbjct: 91 V-TSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQA 127
>gi|19913443 hippocalcin-like 1 [Homo sapiens]
Length = 193
Score = 57.4 bits (137), Expect = 3e-08
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 6/98 (6%)
Query: 367 YASIASSSKGGRIGIEEFAKYLK--LPVSDVLR---QLFALFDRNHDGSIDFREYVIGLA 421
Y G + ++EF K P D + +F FD N DG+IDFRE++I L+
Sbjct: 31 YKGFLKDCPTGHLTVDEFKKIYANFFPYGDASKFAEHVFRTFDTNGDGTIDFREFIIALS 90
Query: 422 VLCNPSNTEEIIQVAFKLFDVDEDGYITEEEFSTILQA 459
V + E+ ++ AF ++D+D +GYI+ E I+QA
Sbjct: 91 V-TSRGKLEQKLKWAFSMYDLDGNGYISRSEMLEIVQA 127
>gi|19913441 hippocalcin-like 1 [Homo sapiens]
Length = 193
Score = 57.4 bits (137), Expect = 3e-08
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 6/98 (6%)
Query: 367 YASIASSSKGGRIGIEEFAKYLK--LPVSDVLR---QLFALFDRNHDGSIDFREYVIGLA 421
Y G + ++EF K P D + +F FD N DG+IDFRE++I L+
Sbjct: 31 YKGFLKDCPTGHLTVDEFKKIYANFFPYGDASKFAEHVFRTFDTNGDGTIDFREFIIALS 90
Query: 422 VLCNPSNTEEIIQVAFKLFDVDEDGYITEEEFSTILQA 459
V + E+ ++ AF ++D+D +GYI+ E I+QA
Sbjct: 91 V-TSRGKLEQKLKWAFSMYDLDGNGYISRSEMLEIVQA 127
>gi|239751420 PREDICTED: similar to hCG2039376 [Homo sapiens]
Length = 858
Score = 57.0 bits (136), Expect = 4e-08
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 21/163 (12%)
Query: 367 YASIASSSKGGRIGIEEFAKYLKLPVSDVLRQ-LFALFDRNHDGSIDFREYVIGLAVLCN 425
Y + + S+ GR +E F + P+ L + LF FD N D IDF+E GL+ C
Sbjct: 271 YWLLKAQSRTGRFDLETFGPLVSPPIRPSLSEGLFNAFDENRDNHIDFKEISCGLSACCR 330
Query: 426 PSNTEEIIQVAFKLFDVDEDGYITEEEFSTILQASL---------GVPDL--DVSGLFKE 474
E + FK+FDVD DG ++ E ++ A L +P+L D+S + +
Sbjct: 331 GPLAER-QKFCFKVFDVDRDGVLSRVELRDMVVALLEVWKDNRTDDIPELHMDLSDIVEG 389
Query: 475 IAQGDS------ISYEEFKSFALKHPEYAKIFTTYLDLQTCHV 511
I ++ E+++ +++K+ A F L Q CH+
Sbjct: 390 ILNAHDTTKMGHLTLEDYQIWSVKN-VLANEFLNLL-FQVCHI 430
>gi|22550104 ubiquitin specific protease 32 [Homo sapiens]
Length = 1604
Score = 57.0 bits (136), Expect = 4e-08
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 21/163 (12%)
Query: 367 YASIASSSKGGRIGIEEFAKYLKLPVSDVLRQ-LFALFDRNHDGSIDFREYVIGLAVLCN 425
Y + + S+ GR +E F + P+ L + LF FD N D IDF+E GL+ C
Sbjct: 203 YWLLKAQSRTGRFDLETFGPLVSPPIRPSLSEGLFNAFDENRDNHIDFKEISCGLSACCR 262
Query: 426 PSNTEEIIQVAFKLFDVDEDGYITEEEFSTILQASL---------GVPDL--DVSGLFKE 474
E + FK+FDVD DG ++ E ++ A L +P+L D+S + +
Sbjct: 263 GPLAER-QKFCFKVFDVDRDGVLSRVELRDMVVALLEVWKDNRTDDIPELHMDLSDIVEG 321
Query: 475 IAQGDS------ISYEEFKSFALKHPEYAKIFTTYLDLQTCHV 511
I ++ E+++ +++K+ A F L Q CH+
Sbjct: 322 ILNAHDTTKMGHLTLEDYQIWSVKN-VLANEFLNLL-FQVCHI 362
>gi|27886676 Kv channel interacting protein 2 isoform 5 [Homo
sapiens]
Length = 225
Score = 55.5 bits (132), Expect = 1e-07
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 399 LFALFDRNHDGSIDFREYVIGLAVLCNPSNTEEIIQVAFKLFDVDEDGYITEEEFSTILQ 458
LF FD NHDGS+ F ++V GL+V+ ++ + AF L+D+++DG IT+EE I++
Sbjct: 103 LFNAFDTNHDGSVSFEDFVAGLSVILR-GTVDDRLNWAFNLYDLNKDGCITKEEMLDIMK 161
Query: 459 ASLGVPDLDVSGLFKEIAQGDSISYEEFKSFALK 492
+ D+ G + A + E +SF K
Sbjct: 162 SI-----YDMMGKYTYPALREEAPREHVESFFQK 190
Score = 30.0 bits (66), Expect = 5.7
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 15/92 (16%)
Query: 377 GRIGIEEFAKYLKL----PVSDVLRQLFALFDRNHDGSIDFREYVIGLAVLCN------- 425
G + E+F L + V D L F L+D N DG I E + + + +
Sbjct: 113 GSVSFEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTY 172
Query: 426 PSNTEEI----IQVAFKLFDVDEDGYITEEEF 453
P+ EE ++ F+ D ++DG +T EEF
Sbjct: 173 PALREEAPREHVESFFQKMDRNKDGVVTIEEF 204
>gi|27886678 Kv channel interacting protein 2 isoform 6 [Homo
sapiens]
Length = 220
Score = 55.5 bits (132), Expect = 1e-07
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 399 LFALFDRNHDGSIDFREYVIGLAVLCNPSNTEEIIQVAFKLFDVDEDGYITEEEFSTILQ 458
LF FD NHDGS+ F ++V GL+V+ ++ + AF L+D+++DG IT+EE I++
Sbjct: 98 LFNAFDTNHDGSVSFEDFVAGLSVILR-GTVDDRLNWAFNLYDLNKDGCITKEEMLDIMK 156
Query: 459 ASLGVPDLDVSGLFKEIAQGDSISYEEFKSFALK 492
+ D+ G + A + E +SF K
Sbjct: 157 SI-----YDMMGKYTYPALREEAPREHVESFFQK 185
Score = 30.0 bits (66), Expect = 5.7
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 15/92 (16%)
Query: 377 GRIGIEEFAKYLKL----PVSDVLRQLFALFDRNHDGSIDFREYVIGLAVLCN------- 425
G + E+F L + V D L F L+D N DG I E + + + +
Sbjct: 108 GSVSFEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTY 167
Query: 426 PSNTEEI----IQVAFKLFDVDEDGYITEEEF 453
P+ EE ++ F+ D ++DG +T EEF
Sbjct: 168 PALREEAPREHVESFFQKMDRNKDGVVTIEEF 199
>gi|27886672 Kv channel interacting protein 2 isoform 3 [Homo
sapiens]
Length = 252
Score = 55.5 bits (132), Expect = 1e-07
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 399 LFALFDRNHDGSIDFREYVIGLAVLCNPSNTEEIIQVAFKLFDVDEDGYITEEEFSTILQ 458
LF FD NHDGS+ F ++V GL+V+ ++ + AF L+D+++DG IT+EE I++
Sbjct: 130 LFNAFDTNHDGSVSFEDFVAGLSVILR-GTVDDRLNWAFNLYDLNKDGCITKEEMLDIMK 188
Query: 459 ASLGVPDLDVSGLFKEIAQGDSISYEEFKSFALK 492
+ D+ G + A + E +SF K
Sbjct: 189 SI-----YDMMGKYTYPALREEAPREHVESFFQK 217
Score = 30.0 bits (66), Expect = 5.7
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 15/92 (16%)
Query: 377 GRIGIEEFAKYLKL----PVSDVLRQLFALFDRNHDGSIDFREYVIGLAVLCN------- 425
G + E+F L + V D L F L+D N DG I E + + + +
Sbjct: 140 GSVSFEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTY 199
Query: 426 PSNTEEI----IQVAFKLFDVDEDGYITEEEF 453
P+ EE ++ F+ D ++DG +T EEF
Sbjct: 200 PALREEAPREHVESFFQKMDRNKDGVVTIEEF 231
>gi|27886674 Kv channel interacting protein 2 isoform 4 [Homo
sapiens]
Length = 227
Score = 55.5 bits (132), Expect = 1e-07
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 399 LFALFDRNHDGSIDFREYVIGLAVLCNPSNTEEIIQVAFKLFDVDEDGYITEEEFSTILQ 458
LF FD NHDGS+ F ++V GL+V+ ++ + AF L+D+++DG IT+EE I++
Sbjct: 105 LFNAFDTNHDGSVSFEDFVAGLSVILR-GTVDDRLNWAFNLYDLNKDGCITKEEMLDIMK 163
Query: 459 ASLGVPDLDVSGLFKEIAQGDSISYEEFKSFALK 492
+ D+ G + A + E +SF K
Sbjct: 164 SI-----YDMMGKYTYPALREEAPREHVESFFQK 192
Score = 30.0 bits (66), Expect = 5.7
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 15/92 (16%)
Query: 377 GRIGIEEFAKYLKL----PVSDVLRQLFALFDRNHDGSIDFREYVIGLAVLCN------- 425
G + E+F L + V D L F L+D N DG I E + + + +
Sbjct: 115 GSVSFEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTY 174
Query: 426 PSNTEEI----IQVAFKLFDVDEDGYITEEEF 453
P+ EE ++ F+ D ++DG +T EEF
Sbjct: 175 PALREEAPREHVESFFQKMDRNKDGVVTIEEF 206
>gi|21361460 Kv channel interacting protein 2 isoform 1 [Homo
sapiens]
Length = 285
Score = 55.5 bits (132), Expect = 1e-07
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 399 LFALFDRNHDGSIDFREYVIGLAVLCNPSNTEEIIQVAFKLFDVDEDGYITEEEFSTILQ 458
LF FD NHDGS+ F ++V GL+V+ ++ + AF L+D+++DG IT+EE I++
Sbjct: 163 LFNAFDTNHDGSVSFEDFVAGLSVILR-GTVDDRLNWAFNLYDLNKDGCITKEEMLDIMK 221
Query: 459 ASLGVPDLDVSGLFKEIAQGDSISYEEFKSFALK 492
+ D+ G + A + E +SF K
Sbjct: 222 SI-----YDMMGKYTYPALREEAPREHVESFFQK 250
Score = 30.0 bits (66), Expect = 5.7
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 15/92 (16%)
Query: 377 GRIGIEEFAKYLKL----PVSDVLRQLFALFDRNHDGSIDFREYVIGLAVLCN------- 425
G + E+F L + V D L F L+D N DG I E + + + +
Sbjct: 173 GSVSFEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTY 232
Query: 426 PSNTEEI----IQVAFKLFDVDEDGYITEEEF 453
P+ EE ++ F+ D ++DG +T EEF
Sbjct: 233 PALREEAPREHVESFFQKMDRNKDGVVTIEEF 264
>gi|27886670 Kv channel interacting protein 2 isoform 2 [Homo
sapiens]
Length = 270
Score = 55.5 bits (132), Expect = 1e-07
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 399 LFALFDRNHDGSIDFREYVIGLAVLCNPSNTEEIIQVAFKLFDVDEDGYITEEEFSTILQ 458
LF FD NHDGS+ F ++V GL+V+ ++ + AF L+D+++DG IT+EE I++
Sbjct: 148 LFNAFDTNHDGSVSFEDFVAGLSVILR-GTVDDRLNWAFNLYDLNKDGCITKEEMLDIMK 206
Query: 459 ASLGVPDLDVSGLFKEIAQGDSISYEEFKSFALK 492
+ D+ G + A + E +SF K
Sbjct: 207 SI-----YDMMGKYTYPALREEAPREHVESFFQK 235
Score = 30.0 bits (66), Expect = 5.7
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 15/92 (16%)
Query: 377 GRIGIEEFAKYLKL----PVSDVLRQLFALFDRNHDGSIDFREYVIGLAVLCN------- 425
G + E+F L + V D L F L+D N DG I E + + + +
Sbjct: 158 GSVSFEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTY 217
Query: 426 PSNTEEI----IQVAFKLFDVDEDGYITEEEF 453
P+ EE ++ F+ D ++DG +T EEF
Sbjct: 218 PALREEAPREHVESFFQKMDRNKDGVVTIEEF 249
>gi|78190488 Kv channel interacting protein 4 isoform 3 [Homo
sapiens]
Length = 188
Score = 55.5 bits (132), Expect = 1e-07
Identities = 24/61 (39%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 399 LFALFDRNHDGSIDFREYVIGLAVLCNPSNTEEIIQVAFKLFDVDEDGYITEEEFSTILQ 458
LF FD +H+G++ F +++ GL++L +E + AF L+D+++DGYIT+EE I++
Sbjct: 66 LFNAFDTDHNGAVSFEDFIKGLSILLR-GTVQEKLNWAFNLYDINKDGYITKEEMLDIMK 124
Query: 459 A 459
A
Sbjct: 125 A 125
Score = 30.0 bits (66), Expect = 5.7
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 15/92 (16%)
Query: 377 GRIGIEEFAKYLKL----PVSDVLRQLFALFDRNHDGSI------DFREYVIGLAVLCN- 425
G + E+F K L + V + L F L+D N DG I D + + + C
Sbjct: 76 GAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTY 135
Query: 426 PSNTEEI----IQVAFKLFDVDEDGYITEEEF 453
P E+ ++ F+ D ++DG +T +EF
Sbjct: 136 PVLKEDAPRQHVETFFQKMDKNKDGVVTIDEF 167
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.138 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,482,118
Number of Sequences: 37866
Number of extensions: 916486
Number of successful extensions: 3278
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 84
Number of HSP's that attempted gapping in prelim test: 2881
Number of HSP's gapped (non-prelim): 393
length of query: 544
length of database: 18,247,518
effective HSP length: 107
effective length of query: 437
effective length of database: 14,195,856
effective search space: 6203589072
effective search space used: 6203589072
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.