Guide to the Human Genome
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Name: PPP3R2 Sequence: fasta or formatted (173aa) NCBI GI: 22212896
Description:

protein phosphatase 3 regulatory subunit B, beta isoform

Referenced in:

Calmodulin and Calcium
Serine / Threonine Protein Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.3          4           1
 C cysteine            0.6          1           1
 D aspartate          11.0         19           1
 E glutamate           8.1         14           2
 F phenylalanine       6.9         12           1
 G glycine             6.9         12           1
 H histidine           1.7          3           1
 I isoleucine          6.4         11           3
 K lysine              8.1         14           2
 L leucine            10.4         18           1
 M methionine          4.0          7           2
 N asparagine          3.5          6           2
 P proline             1.7          3           1
 Q glutamine           3.5          6           2
 R arginine            4.6          8           2
 S serine              7.5         13           1
 T threonine           2.9          5           1
 V valine              7.5         13           2
 W tryptophan          0.6          1           1
 Y tyrosine            1.7          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 3 regulatory subunit B, beta iso... 
PPP3R1                0.822   protein phosphatase 3, regulatory subunit B, alpha is...
CHP                   0.303   calcium binding protein P22 
CHP2                  0.266   hepatocellular carcinoma antigen gene 520 
CIB2                  0.175   DNA-dependent protein kinase catalytic subunit-intera...
HPCAL1                0.169   hippocalcin-like 1 
HPCAL1                0.169   hippocalcin-like 1 
CALM3                 0.163   calmodulin 3 
CALM2                 0.163   calmodulin 2 
CALM1                 0.163   calmodulin 1 
NCALD                 0.163   neurocalcin delta 
NCALD                 0.163   neurocalcin delta 
NCALD                 0.163   neurocalcin delta 
NCALD                 0.163   neurocalcin delta 
NCALD                 0.163   neurocalcin delta 
NCALD                 0.163   neurocalcin delta 
NCALD                 0.163   neurocalcin delta 
NCALD                 0.163   neurocalcin delta 
HPCAL4                0.159   hippocalcin-like protein 4 
FREQ                  0.156   frequenin homolog isoform 2 
FREQ                  0.156   frequenin homolog isoform 1 
CIB3                  0.156   DNA-dependent protein kinase catalytic subunit-inter...
VSNL1                 0.153   visinin-like 1 
CALML3                0.153   calmodulin-like 3 
EFCAB1                0.150   EF-hand calcium binding domain 1 isoform a 
CETN2                 0.150   caltractin 
HPCA                  0.147   hippocalcin 
CETN1                 0.147   centrin 1 
TNNC2                 0.144   fast skeletal muscle troponin C 
EFCAB1                0.138   EF-hand calcium binding domain 1 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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