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Search of human proteins with 47078292
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|47078292 integrin beta chain, beta 3 precursor [Homo
sapiens]
(788 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|47078292 integrin beta chain, beta 3 precursor [Homo sapiens] 1656 0.0
gi|20127446 integrin, beta 5 [Homo sapiens] 904 0.0
gi|9625002 integrin, beta 6 [Homo sapiens] 835 0.0
gi|19743813 integrin beta 1 isoform 1A precursor [Homo sapiens] 701 0.0
gi|19743823 integrin beta 1 isoform 1A precursor [Homo sapiens] 701 0.0
gi|19743819 integrin beta 1 isoform 1D precursor [Homo sapiens] 697 0.0
gi|19743817 integrin beta 1 isoform 1C-1 precursor [Homo sapiens] 682 0.0
gi|19743815 integrin beta 1 isoform 1B precursor [Homo sapiens] 682 0.0
gi|19743821 integrin beta 1 isoform 1C-2 precursor [Homo sapiens] 682 0.0
gi|188595677 integrin, beta 2 precursor [Homo sapiens] 576 e-164
gi|89191865 integrin, beta 2 precursor [Homo sapiens] 576 e-164
gi|4504777 integrin, beta 7 [Homo sapiens] 568 e-162
gi|4504779 integrin, beta 8 precursor [Homo sapiens] 503 e-142
gi|54607027 integrin beta 4 isoform 2 precursor [Homo sapiens] 450 e-126
gi|54607035 integrin beta 4 isoform 1 precursor [Homo sapiens] 450 e-126
gi|54607033 integrin beta 4 isoform 3 precursor [Homo sapiens] 450 e-126
gi|4758614 integrin, beta-like 1 (with EGF-like repeat domains) ... 151 3e-36
gi|157384973 tenascin R [Homo sapiens] 87 6e-17
gi|188528648 tenascin XB isoform 1 precursor [Homo sapiens] 84 4e-16
gi|153946395 tenascin C precursor [Homo sapiens] 83 9e-16
gi|169790825 odz, odd Oz/ten-m homolog 4 [Homo sapiens] 80 1e-14
gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo... 78 3e-14
gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo... 78 3e-14
gi|170016091 odz, odd Oz/ten-m homolog 2 [Homo sapiens] 76 1e-13
gi|122937343 platelet endothelial aggregation receptor 1 [Homo s... 73 9e-13
gi|110347400 odz, odd Oz/ten-m homolog 1 isoform 3 [Homo sapiens] 73 1e-12
gi|253970446 odz, odd Oz/ten-m homolog 1 isoform 2 [Homo sapiens] 73 1e-12
gi|253970444 odz, odd Oz/ten-m homolog 1 isoform 1 [Homo sapiens] 73 1e-12
gi|122937400 odz, odd Oz/ten-m homolog 3 [Homo sapiens] 70 8e-12
gi|33598931 scavenger receptor class F, member 1 isoform 3 precu... 70 1e-11
>gi|47078292 integrin beta chain, beta 3 precursor [Homo sapiens]
Length = 788
Score = 1656 bits (4288), Expect = 0.0
Identities = 788/788 (100%), Positives = 788/788 (100%)
Query: 1 MRARPRPRPLWATVLALGALAGVGVGGPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLG 60
MRARPRPRPLWATVLALGALAGVGVGGPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLG
Sbjct: 1 MRARPRPRPLWATVLALGALAGVGVGGPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLG 60
Query: 61 SPRCDLKENLLKDNCAPESIEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRP 120
SPRCDLKENLLKDNCAPESIEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRP
Sbjct: 61 SPRCDLKENLLKDNCAPESIEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRP 120
Query: 121 DDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFG 180
DDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFG
Sbjct: 121 DDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFG 180
Query: 181 AFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVSR 240
AFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVSR
Sbjct: 181 AFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVSR 240
Query: 241 NRDAPEGGFDAIMQATVCDEKIGWRNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCH 300
NRDAPEGGFDAIMQATVCDEKIGWRNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCH
Sbjct: 241 NRDAPEGGFDAIMQATVCDEKIGWRNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCH 300
Query: 301 VGSDNHYSASTTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLS 360
VGSDNHYSASTTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLS
Sbjct: 301 VGSDNHYSASTTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLS 360
Query: 361 MDSSNVLQLIVDAYGKIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDT 420
MDSSNVLQLIVDAYGKIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDT
Sbjct: 361 MDSSNVLQLIVDAYGKIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDT 420
Query: 421 VSFSIEAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGT 480
VSFSIEAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGT
Sbjct: 421 VSFSIEAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGT 480
Query: 481 FECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCVCHSSDFG 540
FECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCVCHSSDFG
Sbjct: 481 FECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCVCHSSDFG 540
Query: 541 KITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLL 600
KITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLL
Sbjct: 541 KITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLL 600
Query: 601 CSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDRGALHDENTCNRY 660
CSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDRGALHDENTCNRY
Sbjct: 601 CSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDRGALHDENTCNRY 660
Query: 661 CRDEIESVKELKDTGKDAVNCTYKNEDDCVVRFQYYEDSSGKSILYVVEEPECPKGPDIL 720
CRDEIESVKELKDTGKDAVNCTYKNEDDCVVRFQYYEDSSGKSILYVVEEPECPKGPDIL
Sbjct: 661 CRDEIESVKELKDTGKDAVNCTYKNEDDCVVRFQYYEDSSGKSILYVVEEPECPKGPDIL 720
Query: 721 VVLLSVMGAILLIGLAALLIWKLLITIHDRKEFAKFEEERARAKWDTANNPLYKEATSTF 780
VVLLSVMGAILLIGLAALLIWKLLITIHDRKEFAKFEEERARAKWDTANNPLYKEATSTF
Sbjct: 721 VVLLSVMGAILLIGLAALLIWKLLITIHDRKEFAKFEEERARAKWDTANNPLYKEATSTF 780
Query: 781 TNITYRGT 788
TNITYRGT
Sbjct: 781 TNITYRGT 788
>gi|20127446 integrin, beta 5 [Homo sapiens]
Length = 799
Score = 904 bits (2336), Expect = 0.0
Identities = 441/800 (55%), Positives = 562/800 (70%), Gaps = 25/800 (3%)
Query: 7 PRPLWATVLALGALAGVGVGGPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLGSPR--- 63
P PL+A +L L AL + G NICT+ +SC++CL + P CAWCS E GSPR
Sbjct: 5 PAPLYACLLGLCALLP-RLAGLNICTSGSATSCEECLLIHPKCAWCSKE--DFGSPRSIT 61
Query: 64 --CDLKENLLKDNCAPESIEFPVSEARVLEDRPLSDKGSGDSS-QVTQVSPQRIALRLRP 120
CDL+ NL+K+ C E IE P S VL PLS KGSG + V Q++PQ IA+ LRP
Sbjct: 62 SRCDLRANLVKNGCGGE-IESPASSFHVLRSLPLSSKGSGSAGWDVIQMTPQEIAVNLRP 120
Query: 121 DDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFG 180
D F +QVRQVEDYPVD+YYLMDLS SMKDDL +I++LGTKLA +MRKLTSN R+GFG
Sbjct: 121 GDKTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFG 180
Query: 181 AFVDKPVSPYMYISPPEALENPC--YDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSV 238
+FVDK +SP+ Y +P NPC Y + C+P FG++H+L LTD+V FNEEV+KQ V
Sbjct: 181 SFVDKDISPFSYTAP-RYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRV 239
Query: 239 SRNRDAPEGGFDAIMQATVCDEKIGWRNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQ 298
SRNRDAPEGGFDA++QA VC EKIGWR DA HLLVFTTD HIALDG+L G+VQP+DGQ
Sbjct: 240 SRNRDAPEGGFDAVLQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQ 299
Query: 299 CHVGSDNHYSASTTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGV 358
CH+ N Y+AS MDYPSL L+ EKL++ NINLIFAVT+N LY+N++ LIPGTTV +
Sbjct: 300 CHLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEI 359
Query: 359 LSMDSSNVLQLIVDAYGKIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIG 418
L DS N++QLI++AY IRSKVEL V D PE+L+L F ATC + PG + C GLKIG
Sbjct: 360 LDGDSKNIIQLIINAYNSIRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIG 419
Query: 419 DTVSFSIEAKVRGCP-QEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNG 477
DT SF + + R CP + E F ++PVGF+DSL V VT++C C C EPNS RCN G
Sbjct: 420 DTASFEVSLEARSCPSRHTEHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCN-G 478
Query: 478 NGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCVCHSS 537
+GT+ CG+C C PG+LG++CEC + + + Q+ C EG+P+CS RG+C C QC C S
Sbjct: 479 SGTYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFES 538
Query: 538 DFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSN 597
+FGKI G +CECD+FSC R KG +CSGHG+C CG+C C + + G CNC+T TC +
Sbjct: 539 EFGKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRD 598
Query: 598 GLLCSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDRGALHDENTC 657
G +CS RG C CG C C +PG++G+ CEKCPTCPDAC+ K++CVEC G D TC
Sbjct: 599 GQICSERGHCLCGQCQCTEPGAFGEMCEKCPTCPDACSTKRDCVECLLLHSGK-PDNQTC 657
Query: 658 NRYCRDEIES-VKELKDTGKDAVNCTYKNEDDCVVRFQYYEDSSGKSILYVVEEPECPKG 716
+ CRDE+ + V + ++AV C YK DCV+ F Y E SGKS L V+ EPEC
Sbjct: 658 HSLCRDEVITWVDTIVKDDQEAVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREPECGNT 717
Query: 717 PDILVVLLSVMGAILLIGLAALLIWKLLITIHDRKEFAKFEEERARAKWDTANNPLYKEA 776
P+ + +LL+V+G+ILL+GLA L IWKLL+TIHDR+EFAKF+ ER+RA+++ A+NPLY++
Sbjct: 718 PNAMTILLAVVGSILLVGLALLAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKP 777
Query: 777 TSTFT--------NITYRGT 788
ST T N +Y GT
Sbjct: 778 ISTHTVDFTFNKFNKSYNGT 797
>gi|9625002 integrin, beta 6 [Homo sapiens]
Length = 788
Score = 835 bits (2158), Expect = 0.0
Identities = 387/760 (50%), Positives = 521/760 (68%), Gaps = 11/760 (1%)
Query: 31 CTTRGVSSCQQCLAVSPMCAWCSDEAL--PLG-SPRCDLKENLLKDNCAPESIEFPVSEA 87
C G +C+ CL + P CAWC+ E P G RCD NLL C IE PVS+
Sbjct: 23 CALGGAETCEDCLLIGPQCAWCAQENFTHPSGVGERCDTPANLLAKGCQLNFIENPVSQV 82
Query: 88 RVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPVDIYYLMDLS 147
+L+++PLS +SS + Q++PQ + L+LRP ++ + VRQ EDYPVD+YYLMDLS
Sbjct: 83 EILKNKPLSVGRQKNSSDIVQIAPQSLILKLRPGGAQTLQVHVRQTEDYPVDLYYLMDLS 142
Query: 148 YSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMK 207
SM DDL +I+ LG++L+ +M KLTSN R+GFG+FV+KPVSP++ +P E + NPC +
Sbjct: 143 ASMDDDLNTIKELGSRLSKEMSKLTSNFRLGFGSFVEKPVSPFVKTTPEE-IANPCSSIP 201
Query: 208 TTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVSRNRDAPEGGFDAIMQATVCDEKIGWRND 267
CLP FG+KH+L LT+ RFNE VK Q +S N D PEGGFDAIMQA VC EKIGWRND
Sbjct: 202 YFCLPTFGFKHILPLTNDAERFNEIVKNQKISANIDTPEGGFDAIMQAAVCKEKIGWRND 261
Query: 268 ASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYPSLGLMTEKLSQ 327
+ HLLVF +DA +H +D +LAGIV PNDG CH+ S N YS ST ++YP++G + +KL Q
Sbjct: 262 SLHLLVFVSDADSHFGMDSKLAGIVIPNDGLCHLDSKNEYSMSTVLEYPTIGQLIDKLVQ 321
Query: 328 KNINLIFAVTENVVNLYQNYSELIPGTTVGVLSMDSSNVLQLIVDAYGKIRSKVELEVRD 387
N+ LIFAVT+ V+LY+NY++LIPG TVG+L DS N+LQLI+ AY ++RS+VELEV
Sbjct: 322 NNVLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNILQLIISAYEELRSEVELEVLG 381
Query: 388 LPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSIEAKVRGCPQEKEKSFTIKPVGF 447
E L+LSF A C N + K C +K+GDT SFS+ + C + + + IKPVG
Sbjct: 382 DTEGLNLSFTAICNNGTLFQHQKKCSHMKVGDTASFSVTVNIPHC-ERRSRHIIIKPVGL 440
Query: 448 KDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPS 507
D+L + V+ +C+C CQ + E NS +C++GNG+F+CGVC C PG +G +CEC E+
Sbjct: 441 GDALELLVSPECNCDCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCECGED---ML 497
Query: 508 QQDECSPREGQPVCSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQ 567
D C P CS RG+C CGQC+CH S +G I G YC+CD+FSCVR+KG +C G+G
Sbjct: 498 STDSCKEAPDHPSCSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFSCVRHKGLLCGGNGD 557
Query: 568 CSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKC 627
C CG+C+C S WTG YCNCTT TD+C+S +G+LCSGRG C CG CVC PG+ G TCE+C
Sbjct: 558 CDCGECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGKCVCTNPGASGPTCERC 617
Query: 628 PTCPDACTFKKECVECKKFDRGALHDENTCNRYCRDEIESVKELKDTGKD-AVNCTYKNE 686
PTC D C K+ C+EC G +E C C+ ++ E +D KD +V+C+ + E
Sbjct: 618 PTCGDPCNSKRSCIECHLSAAGQAREE--CVDKCKLAGATISEEEDFSKDGSVSCSLQGE 675
Query: 687 DDCVVRFQYYEDSSGKSILYVVEEPECPKGPDILVVLLSVMGAILLIGLAALLIWKLLIT 746
++C++ F D+ GK+I++ + E +CPK P+I +++L V AILLIG+ L IWKLL++
Sbjct: 676 NECLITFLITTDNEGKTIIHSINEKDCPKPPNIPMIMLGVSLAILLIGVVLLCIWKLLVS 735
Query: 747 IHDRKEFAKFEEERARAKWDTANNPLYKEATSTFTNITYR 786
HDRKE AKFE ER++AKW T NPLY+ +TSTF N+TY+
Sbjct: 736 FHDRKEVAKFEAERSKAKWQTGTNPLYRGSTSTFKNVTYK 775
>gi|19743813 integrin beta 1 isoform 1A precursor [Homo sapiens]
Length = 798
Score = 701 bits (1810), Expect = 0.0
Identities = 350/778 (44%), Positives = 485/778 (62%), Gaps = 24/778 (3%)
Query: 29 NICTTRGVSSCQQCLAVSPMCAWCSD-----EALPLGSPRCDLKENLLKDNCAPESIEFP 83
N C SC +C+ P C WC++ E +P S RCD E L K C P+ IE P
Sbjct: 25 NRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPT-SARCDDLEALKKKGCPPDDIENP 83
Query: 84 VSEARVLEDRPLSDKGSGDSSQ-----VTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPV 138
+ +++ ++++ G + + +TQ+ PQ++ LRLR + + F+++ ++ EDYP+
Sbjct: 84 RGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYPI 143
Query: 139 DIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEA 198
D+YYLMDLSYSMKDDL ++++LGT L +MR++TS+ RIGFG+FV+K V PY+ +P +
Sbjct: 144 DLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAK- 202
Query: 199 LENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVSRNRDAPEGGFDAIMQATVC 258
L NPC + C F YK+VL+LT++ FNE V KQ +S N D+PEGGFDAIMQ VC
Sbjct: 203 LRNPCTS-EQNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVC 261
Query: 259 DEKIGWRNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYPSL 318
IGWRN + LLVF+TDA H A DG+L GIV PNDGQCH+ +N Y+ S DYPS+
Sbjct: 262 GSLIGWRN-VTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHL-ENNMYTMSHYYDYPSI 319
Query: 319 GLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLSMDSSNVLQLIVDAYGKIR 378
+ +KLS+ NI IFAVTE +Y+ LIP + VG LS +SSNV+QLI+DAY +
Sbjct: 320 AHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNSLS 379
Query: 379 SKVELEVRDLPEELSLSFNATCLN--NEVIPGLKSCMGLKIGDTVSFSIEAKVRGCPQEK 436
S+V LE L E +++S+ + C N N + C + IGD V F I CP++
Sbjct: 380 SEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFEISITSNKCPKKD 439
Query: 437 EKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQ 496
SF I+P+GF + + V + + C+C CQ++ P S +C+ GNGTFECG CRC G +G
Sbjct: 440 SDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRH 499
Query: 497 CECSEEDYRPSQQDE-CSPREGQPVCSQRGECLCGQCVCHSSDFGK--ITGKYCECDDFS 553
CECS ++ D C +CS GEC+CGQCVC D +GK+CECD+F+
Sbjct: 500 CECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFN 559
Query: 554 CVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCV 613
C R G +C G+G C C C C+ ++TG C+C+ T TC +SNG +C+GRG CECG C
Sbjct: 560 CDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCK 619
Query: 614 CIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDRGALHDENT--CNRYCRDEIESVKEL 671
C P G TCE C TC C KECV+C+ F++G D T C+ + ++ES +L
Sbjct: 620 CTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQECSYFNITKVESRDKL 679
Query: 672 -KDTGKDAV-NCTYKNEDDCVVRFQYYEDSSGKSILYVVEEPECPKGPDILVVLLSVMGA 729
+ D V +C K+ DDC F Y + + + +++VVE PECP GPDI+ ++ V+
Sbjct: 680 PQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAGVVAG 739
Query: 730 ILLIGLAALLIWKLLITIHDRKEFAKFEEERARAKWDTANNPLYKEATSTFTNITYRG 787
I+LIGLA LLIWKLL+ IHDR+EFAKFE+E+ AKWDT NP+YK A +T N Y G
Sbjct: 740 IVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGENPIYKSAVTTVVNPKYEG 797
>gi|19743823 integrin beta 1 isoform 1A precursor [Homo sapiens]
Length = 798
Score = 701 bits (1810), Expect = 0.0
Identities = 350/778 (44%), Positives = 485/778 (62%), Gaps = 24/778 (3%)
Query: 29 NICTTRGVSSCQQCLAVSPMCAWCSD-----EALPLGSPRCDLKENLLKDNCAPESIEFP 83
N C SC +C+ P C WC++ E +P S RCD E L K C P+ IE P
Sbjct: 25 NRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPT-SARCDDLEALKKKGCPPDDIENP 83
Query: 84 VSEARVLEDRPLSDKGSGDSSQ-----VTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPV 138
+ +++ ++++ G + + +TQ+ PQ++ LRLR + + F+++ ++ EDYP+
Sbjct: 84 RGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYPI 143
Query: 139 DIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEA 198
D+YYLMDLSYSMKDDL ++++LGT L +MR++TS+ RIGFG+FV+K V PY+ +P +
Sbjct: 144 DLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAK- 202
Query: 199 LENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVSRNRDAPEGGFDAIMQATVC 258
L NPC + C F YK+VL+LT++ FNE V KQ +S N D+PEGGFDAIMQ VC
Sbjct: 203 LRNPCTS-EQNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVC 261
Query: 259 DEKIGWRNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYPSL 318
IGWRN + LLVF+TDA H A DG+L GIV PNDGQCH+ +N Y+ S DYPS+
Sbjct: 262 GSLIGWRN-VTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHL-ENNMYTMSHYYDYPSI 319
Query: 319 GLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLSMDSSNVLQLIVDAYGKIR 378
+ +KLS+ NI IFAVTE +Y+ LIP + VG LS +SSNV+QLI+DAY +
Sbjct: 320 AHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNSLS 379
Query: 379 SKVELEVRDLPEELSLSFNATCLN--NEVIPGLKSCMGLKIGDTVSFSIEAKVRGCPQEK 436
S+V LE L E +++S+ + C N N + C + IGD V F I CP++
Sbjct: 380 SEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFEISITSNKCPKKD 439
Query: 437 EKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQ 496
SF I+P+GF + + V + + C+C CQ++ P S +C+ GNGTFECG CRC G +G
Sbjct: 440 SDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRH 499
Query: 497 CECSEEDYRPSQQDE-CSPREGQPVCSQRGECLCGQCVCHSSDFGK--ITGKYCECDDFS 553
CECS ++ D C +CS GEC+CGQCVC D +GK+CECD+F+
Sbjct: 500 CECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFN 559
Query: 554 CVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCV 613
C R G +C G+G C C C C+ ++TG C+C+ T TC +SNG +C+GRG CECG C
Sbjct: 560 CDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCK 619
Query: 614 CIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDRGALHDENT--CNRYCRDEIESVKEL 671
C P G TCE C TC C KECV+C+ F++G D T C+ + ++ES +L
Sbjct: 620 CTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQECSYFNITKVESRDKL 679
Query: 672 -KDTGKDAV-NCTYKNEDDCVVRFQYYEDSSGKSILYVVEEPECPKGPDILVVLLSVMGA 729
+ D V +C K+ DDC F Y + + + +++VVE PECP GPDI+ ++ V+
Sbjct: 680 PQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAGVVAG 739
Query: 730 ILLIGLAALLIWKLLITIHDRKEFAKFEEERARAKWDTANNPLYKEATSTFTNITYRG 787
I+LIGLA LLIWKLL+ IHDR+EFAKFE+E+ AKWDT NP+YK A +T N Y G
Sbjct: 740 IVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGENPIYKSAVTTVVNPKYEG 797
>gi|19743819 integrin beta 1 isoform 1D precursor [Homo sapiens]
Length = 801
Score = 697 bits (1799), Expect = 0.0
Identities = 348/776 (44%), Positives = 483/776 (62%), Gaps = 24/776 (3%)
Query: 29 NICTTRGVSSCQQCLAVSPMCAWCSD-----EALPLGSPRCDLKENLLKDNCAPESIEFP 83
N C SC +C+ P C WC++ E +P S RCD E L K C P+ IE P
Sbjct: 25 NRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPT-SARCDDLEALKKKGCPPDDIENP 83
Query: 84 VSEARVLEDRPLSDKGSGDSSQ-----VTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPV 138
+ +++ ++++ G + + +TQ+ PQ++ LRLR + + F+++ ++ EDYP+
Sbjct: 84 RGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYPI 143
Query: 139 DIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEA 198
D+YYLMDLSYSMKDDL ++++LGT L +MR++TS+ RIGFG+FV+K V PY+ +P +
Sbjct: 144 DLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAK- 202
Query: 199 LENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVSRNRDAPEGGFDAIMQATVC 258
L NPC + C F YK+VL+LT++ FNE V KQ +S N D+PEGGFDAIMQ VC
Sbjct: 203 LRNPCTS-EQNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVC 261
Query: 259 DEKIGWRNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYPSL 318
IGWRN + LLVF+TDA H A DG+L GIV PNDGQCH+ +N Y+ S DYPS+
Sbjct: 262 GSLIGWRN-VTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHL-ENNMYTMSHYYDYPSI 319
Query: 319 GLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLSMDSSNVLQLIVDAYGKIR 378
+ +KLS+ NI IFAVTE +Y+ LIP + VG LS +SSNV+QLI+DAY +
Sbjct: 320 AHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNSLS 379
Query: 379 SKVELEVRDLPEELSLSFNATCLN--NEVIPGLKSCMGLKIGDTVSFSIEAKVRGCPQEK 436
S+V LE L E +++S+ + C N N + C + IGD V F I CP++
Sbjct: 380 SEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFEISITSNKCPKKD 439
Query: 437 EKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQ 496
SF I+P+GF + + V + + C+C CQ++ P S +C+ GNGTFECG CRC G +G
Sbjct: 440 SDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRH 499
Query: 497 CECSEEDYRPSQQDE-CSPREGQPVCSQRGECLCGQCVCHSSDFGK--ITGKYCECDDFS 553
CECS ++ D C +CS GEC+CGQCVC D +GK+CECD+F+
Sbjct: 500 CECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFN 559
Query: 554 CVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCV 613
C R G +C G+G C C C C+ ++TG C+C+ T TC +SNG +C+GRG CECG C
Sbjct: 560 CDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCK 619
Query: 614 CIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDRGALHDENT--CNRYCRDEIESVKEL 671
C P G TCE C TC C KECV+C+ F++G D T C+ + ++ES +L
Sbjct: 620 CTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQECSYFNITKVESRDKL 679
Query: 672 -KDTGKDAV-NCTYKNEDDCVVRFQYYEDSSGKSILYVVEEPECPKGPDILVVLLSVMGA 729
+ D V +C K+ DDC F Y + + + +++VVE PECP GPDI+ ++ V+
Sbjct: 680 PQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAGVVAG 739
Query: 730 ILLIGLAALLIWKLLITIHDRKEFAKFEEERARAKWDTANNPLYKEATSTFTNITY 785
I+LIGLA LLIWKLL+ IHDR+EFAKFE+E+ AKWDT NP+YK + F N Y
Sbjct: 740 IVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQENPIYKSPINNFKNPNY 795
>gi|19743817 integrin beta 1 isoform 1C-1 precursor [Homo sapiens]
Length = 825
Score = 682 bits (1760), Expect = 0.0
Identities = 341/759 (44%), Positives = 475/759 (62%), Gaps = 24/759 (3%)
Query: 29 NICTTRGVSSCQQCLAVSPMCAWCSD-----EALPLGSPRCDLKENLLKDNCAPESIEFP 83
N C SC +C+ P C WC++ E +P S RCD E L K C P+ IE P
Sbjct: 25 NRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPT-SARCDDLEALKKKGCPPDDIENP 83
Query: 84 VSEARVLEDRPLSDKGSGDSSQ-----VTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPV 138
+ +++ ++++ G + + +TQ+ PQ++ LRLR + + F+++ ++ EDYP+
Sbjct: 84 RGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYPI 143
Query: 139 DIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEA 198
D+YYLMDLSYSMKDDL ++++LGT L +MR++TS+ RIGFG+FV+K V PY+ +P +
Sbjct: 144 DLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAK- 202
Query: 199 LENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVSRNRDAPEGGFDAIMQATVC 258
L NPC + C F YK+VL+LT++ FNE V KQ +S N D+PEGGFDAIMQ VC
Sbjct: 203 LRNPCTS-EQNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVC 261
Query: 259 DEKIGWRNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYPSL 318
IGWRN + LLVF+TDA H A DG+L GIV PNDGQCH+ +N Y+ S DYPS+
Sbjct: 262 GSLIGWRN-VTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHL-ENNMYTMSHYYDYPSI 319
Query: 319 GLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLSMDSSNVLQLIVDAYGKIR 378
+ +KLS+ NI IFAVTE +Y+ LIP + VG LS +SSNV+QLI+DAY +
Sbjct: 320 AHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNSLS 379
Query: 379 SKVELEVRDLPEELSLSFNATCLN--NEVIPGLKSCMGLKIGDTVSFSIEAKVRGCPQEK 436
S+V LE L E +++S+ + C N N + C + IGD V F I CP++
Sbjct: 380 SEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFEISITSNKCPKKD 439
Query: 437 EKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQ 496
SF I+P+GF + + V + + C+C CQ++ P S +C+ GNGTFECG CRC G +G
Sbjct: 440 SDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRH 499
Query: 497 CECSEEDYRPSQQDE-CSPREGQPVCSQRGECLCGQCVCHSSDFGK--ITGKYCECDDFS 553
CECS ++ D C +CS GEC+CGQCVC D +GK+CECD+F+
Sbjct: 500 CECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFN 559
Query: 554 CVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCV 613
C R G +C G+G C C C C+ ++TG C+C+ T TC +SNG +C+GRG CECG C
Sbjct: 560 CDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCK 619
Query: 614 CIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDRGALHDENT--CNRYCRDEIESVKEL 671
C P G TCE C TC C KECV+C+ F++G D T C+ + ++ES +L
Sbjct: 620 CTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQECSYFNITKVESRDKL 679
Query: 672 -KDTGKDAV-NCTYKNEDDCVVRFQYYEDSSGKSILYVVEEPECPKGPDILVVLLSVMGA 729
+ D V +C K+ DDC F Y + + + +++VVE PECP GPDI+ ++ V+
Sbjct: 680 PQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAGVVAG 739
Query: 730 ILLIGLAALLIWKLLITIHDRKEFAKFEEERARAKWDTA 768
I+LIGLA LLIWKLL+ IHDR+EFAKFE+E+ AKWDT+
Sbjct: 740 IVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTS 778
>gi|19743815 integrin beta 1 isoform 1B precursor [Homo sapiens]
Length = 789
Score = 682 bits (1760), Expect = 0.0
Identities = 341/760 (44%), Positives = 475/760 (62%), Gaps = 24/760 (3%)
Query: 29 NICTTRGVSSCQQCLAVSPMCAWCSD-----EALPLGSPRCDLKENLLKDNCAPESIEFP 83
N C SC +C+ P C WC++ E +P S RCD E L K C P+ IE P
Sbjct: 25 NRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPT-SARCDDLEALKKKGCPPDDIENP 83
Query: 84 VSEARVLEDRPLSDKGSGDSSQ-----VTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPV 138
+ +++ ++++ G + + +TQ+ PQ++ LRLR + + F+++ ++ EDYP+
Sbjct: 84 RGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYPI 143
Query: 139 DIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEA 198
D+YYLMDLSYSMKDDL ++++LGT L +MR++TS+ RIGFG+FV+K V PY+ +P +
Sbjct: 144 DLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAK- 202
Query: 199 LENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVSRNRDAPEGGFDAIMQATVC 258
L NPC + C F YK+VL+LT++ FNE V KQ +S N D+PEGGFDAIMQ VC
Sbjct: 203 LRNPCTS-EQNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVC 261
Query: 259 DEKIGWRNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYPSL 318
IGWRN + LLVF+TDA H A DG+L GIV PNDGQCH+ +N Y+ S DYPS+
Sbjct: 262 GSLIGWRN-VTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHL-ENNMYTMSHYYDYPSI 319
Query: 319 GLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLSMDSSNVLQLIVDAYGKIR 378
+ +KLS+ NI IFAVTE +Y+ LIP + VG LS +SSNV+QLI+DAY +
Sbjct: 320 AHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNSLS 379
Query: 379 SKVELEVRDLPEELSLSFNATCLN--NEVIPGLKSCMGLKIGDTVSFSIEAKVRGCPQEK 436
S+V LE L E +++S+ + C N N + C + IGD V F I CP++
Sbjct: 380 SEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFEISITSNKCPKKD 439
Query: 437 EKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQ 496
SF I+P+GF + + V + + C+C CQ++ P S +C+ GNGTFECG CRC G +G
Sbjct: 440 SDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRH 499
Query: 497 CECSEEDYRPSQQDE-CSPREGQPVCSQRGECLCGQCVCHSSDFGK--ITGKYCECDDFS 553
CECS ++ D C +CS GEC+CGQCVC D +GK+CECD+F+
Sbjct: 500 CECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFN 559
Query: 554 CVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCV 613
C R G +C G+G C C C C+ ++TG C+C+ T TC +SNG +C+GRG CECG C
Sbjct: 560 CDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCK 619
Query: 614 CIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDRGALHDENT--CNRYCRDEIESVKEL 671
C P G TCE C TC C KECV+C+ F++G D T C+ + ++ES +L
Sbjct: 620 CTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQECSYFNITKVESRDKL 679
Query: 672 -KDTGKDAV-NCTYKNEDDCVVRFQYYEDSSGKSILYVVEEPECPKGPDILVVLLSVMGA 729
+ D V +C K+ DDC F Y + + + +++VVE PECP GPDI+ ++ V+
Sbjct: 680 PQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAGVVAG 739
Query: 730 ILLIGLAALLIWKLLITIHDRKEFAKFEEERARAKWDTAN 769
I+LIGLA LLIWKLL+ IHDR+EFAKFE+E+ AKWDT +
Sbjct: 740 IVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTVS 779
>gi|19743821 integrin beta 1 isoform 1C-2 precursor [Homo sapiens]
Length = 819
Score = 682 bits (1759), Expect = 0.0
Identities = 341/758 (44%), Positives = 474/758 (62%), Gaps = 24/758 (3%)
Query: 29 NICTTRGVSSCQQCLAVSPMCAWCSD-----EALPLGSPRCDLKENLLKDNCAPESIEFP 83
N C SC +C+ P C WC++ E +P S RCD E L K C P+ IE P
Sbjct: 25 NRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPT-SARCDDLEALKKKGCPPDDIENP 83
Query: 84 VSEARVLEDRPLSDKGSGDSSQ-----VTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPV 138
+ +++ ++++ G + + +TQ+ PQ++ LRLR + + F+++ ++ EDYP+
Sbjct: 84 RGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYPI 143
Query: 139 DIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEA 198
D+YYLMDLSYSMKDDL ++++LGT L +MR++TS+ RIGFG+FV+K V PY+ +P +
Sbjct: 144 DLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAK- 202
Query: 199 LENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVSRNRDAPEGGFDAIMQATVC 258
L NPC + C F YK+VL+LT++ FNE V KQ +S N D+PEGGFDAIMQ VC
Sbjct: 203 LRNPCTS-EQNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVC 261
Query: 259 DEKIGWRNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYPSL 318
IGWRN + LLVF+TDA H A DG+L GIV PNDGQCH+ +N Y+ S DYPS+
Sbjct: 262 GSLIGWRN-VTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHL-ENNMYTMSHYYDYPSI 319
Query: 319 GLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLSMDSSNVLQLIVDAYGKIR 378
+ +KLS+ NI IFAVTE +Y+ LIP + VG LS +SSNV+QLI+DAY +
Sbjct: 320 AHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNSLS 379
Query: 379 SKVELEVRDLPEELSLSFNATCLN--NEVIPGLKSCMGLKIGDTVSFSIEAKVRGCPQEK 436
S+V LE L E +++S+ + C N N + C + IGD V F I CP++
Sbjct: 380 SEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFEISITSNKCPKKD 439
Query: 437 EKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQ 496
SF I+P+GF + + V + + C+C CQ++ P S +C+ GNGTFECG CRC G +G
Sbjct: 440 SDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRH 499
Query: 497 CECSEEDYRPSQQDE-CSPREGQPVCSQRGECLCGQCVCHSSDFGK--ITGKYCECDDFS 553
CECS ++ D C +CS GEC+CGQCVC D +GK+CECD+F+
Sbjct: 500 CECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFN 559
Query: 554 CVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCV 613
C R G +C G+G C C C C+ ++TG C+C+ T TC +SNG +C+GRG CECG C
Sbjct: 560 CDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCK 619
Query: 614 CIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDRGALHDENT--CNRYCRDEIESVKEL 671
C P G TCE C TC C KECV+C+ F++G D T C+ + ++ES +L
Sbjct: 620 CTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQECSYFNITKVESRDKL 679
Query: 672 -KDTGKDAV-NCTYKNEDDCVVRFQYYEDSSGKSILYVVEEPECPKGPDILVVLLSVMGA 729
+ D V +C K+ DDC F Y + + + +++VVE PECP GPDI+ ++ V+
Sbjct: 680 PQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAGVVAG 739
Query: 730 ILLIGLAALLIWKLLITIHDRKEFAKFEEERARAKWDT 767
I+LIGLA LLIWKLL+ IHDR+EFAKFE+E+ AKWDT
Sbjct: 740 IVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDT 777
>gi|188595677 integrin, beta 2 precursor [Homo sapiens]
Length = 769
Score = 576 bits (1484), Expect = e-164
Identities = 312/782 (39%), Positives = 445/782 (56%), Gaps = 39/782 (4%)
Query: 14 VLALGALAGVGVGGPNICTTRGVSSCQQCLAVSPMCAWCSD-EALPLGSP---RCDLKEN 69
+LAL L +G CT VSSC++C+ P C WC G P RCD +
Sbjct: 8 LLALVGLLSLGCVLSQECTKFKVSSCRECIESGPGCTWCQKLNFTGPGDPDSIRCDTRPQ 67
Query: 70 LLKDNCAPESIEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRPDDSKNFSIQ 129
LL CA + I P S A ED K Q+SPQ++ L LRP + F++
Sbjct: 68 LLMRGCAADDIMDPTSLAETQEDHNGGQK---------QLSPQKVTLYLRPGQAAAFNVT 118
Query: 130 VRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSP 189
R+ + YP+D+YYLMDLSYSM DDL +++ LG L + ++T + RIGFG+FVDK V P
Sbjct: 119 FRRAKGYPIDLYYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGRIGFGSFVDKTVLP 178
Query: 190 YMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVSRNRDAPEGGF 249
++ + P+ L NPC + + C P F ++HVL LT+ +F EV KQ +S N DAPEGG
Sbjct: 179 FVN-THPDKLRNPCPNKEKECQPPFAFRHVLKLTNNSNQFQTEVGKQLISGNLDAPEGGL 237
Query: 250 DAIMQATVCDEKIGWRNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSA 309
DA+MQ C E+IGWRN + LLVF TD H A DG+L I+ PNDG+CH+ DN Y
Sbjct: 238 DAMMQVAACPEEIGWRN-VTRLLVFATDDGFHFAGDGKLGAILTPNDGRCHL-EDNLYKR 295
Query: 310 STTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLSMDSSNVLQL 369
S DYPS+G + KL++ NI IFAVT +V Y+ +E+IP + VG LS DSSNV+QL
Sbjct: 296 SNEFDYPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSEDSSNVVQL 355
Query: 370 IVDAYGKIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLK--SCMGLKIGDTVSFSIEA 427
I +AY K+ S+V L+ LP+ L +++++ C N C G++I ++F ++
Sbjct: 356 IKNAYNKLSSRVFLDHNALPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQINVPITFQVKV 415
Query: 428 KVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCR 487
C Q E+SF I+ +GF D + VQV C+C C+ Q+ S +G G ECG+CR
Sbjct: 416 TATECIQ--EQSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRS--LCHGKGFLECGICR 471
Query: 488 CGPGWLGSQCECSEEDYRPSQQDE--CSPREGQPVCSQRGECLCGQCVCHSSDF-GK-IT 543
C G++G CEC + R SQ+ E C +CS G+C+CGQC+CH+SD GK I
Sbjct: 472 CDTGYIGKNCECQTQG-RSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIY 530
Query: 544 GKYCECDDFSCVRYKGEMCSGHGQ--CSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLC 601
G+YCECD +C RY G++C G G+ C CG C C + G C C T+ C++ + C
Sbjct: 531 GQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRVEC 590
Query: 602 SGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDRGALHDENTCNRYC 661
SGRG+C C C C G C++CP CP C C EC KF++G C+ C
Sbjct: 591 SGRGRCRCNVCEC-HSGYQLPLCQECPGCPSPCGKYISCAECLKFEKGPF--GKNCSAAC 647
Query: 662 RDEIESVKELKDTGKDAVNCTYKNEDDCVVRFQY-YEDSSGKSILYVVEEPECPKGPDIL 720
+L + C ++ + C V + +D + ++YV E EC GP+I
Sbjct: 648 PG-----LQLSNNPVKGRTCKERDSEGCWVAYTLEQQDGMDRYLIYVDESRECVAGPNIA 702
Query: 721 VVLLSVMGAILLIGLAALLIWKLLITIHDRKEFAKFEEERARAKWDTANNPLYKEATSTF 780
++ + I+LIG+ L+IWK LI + D +E+ +FE+E+ +++W+ +NPL+K AT+T
Sbjct: 703 AIVGGTVAGIVLIGILLLVIWKALIHLSDLREYRRFEKEKLKSQWNN-DNPLFKSATTTV 761
Query: 781 TN 782
N
Sbjct: 762 MN 763
>gi|89191865 integrin, beta 2 precursor [Homo sapiens]
Length = 769
Score = 576 bits (1484), Expect = e-164
Identities = 312/782 (39%), Positives = 445/782 (56%), Gaps = 39/782 (4%)
Query: 14 VLALGALAGVGVGGPNICTTRGVSSCQQCLAVSPMCAWCSD-EALPLGSP---RCDLKEN 69
+LAL L +G CT VSSC++C+ P C WC G P RCD +
Sbjct: 8 LLALVGLLSLGCVLSQECTKFKVSSCRECIESGPGCTWCQKLNFTGPGDPDSIRCDTRPQ 67
Query: 70 LLKDNCAPESIEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRPDDSKNFSIQ 129
LL CA + I P S A ED K Q+SPQ++ L LRP + F++
Sbjct: 68 LLMRGCAADDIMDPTSLAETQEDHNGGQK---------QLSPQKVTLYLRPGQAAAFNVT 118
Query: 130 VRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSP 189
R+ + YP+D+YYLMDLSYSM DDL +++ LG L + ++T + RIGFG+FVDK V P
Sbjct: 119 FRRAKGYPIDLYYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESGRIGFGSFVDKTVLP 178
Query: 190 YMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVSRNRDAPEGGF 249
++ + P+ L NPC + + C P F ++HVL LT+ +F EV KQ +S N DAPEGG
Sbjct: 179 FVN-THPDKLRNPCPNKEKECQPPFAFRHVLKLTNNSNQFQTEVGKQLISGNLDAPEGGL 237
Query: 250 DAIMQATVCDEKIGWRNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSA 309
DA+MQ C E+IGWRN + LLVF TD H A DG+L I+ PNDG+CH+ DN Y
Sbjct: 238 DAMMQVAACPEEIGWRN-VTRLLVFATDDGFHFAGDGKLGAILTPNDGRCHL-EDNLYKR 295
Query: 310 STTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLSMDSSNVLQL 369
S DYPS+G + KL++ NI IFAVT +V Y+ +E+IP + VG LS DSSNV+QL
Sbjct: 296 SNEFDYPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSEDSSNVVQL 355
Query: 370 IVDAYGKIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLK--SCMGLKIGDTVSFSIEA 427
I +AY K+ S+V L+ LP+ L +++++ C N C G++I ++F ++
Sbjct: 356 IKNAYNKLSSRVFLDHNALPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQINVPITFQVKV 415
Query: 428 KVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCR 487
C Q E+SF I+ +GF D + VQV C+C C+ Q+ S +G G ECG+CR
Sbjct: 416 TATECIQ--EQSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRS--LCHGKGFLECGICR 471
Query: 488 CGPGWLGSQCECSEEDYRPSQQDE--CSPREGQPVCSQRGECLCGQCVCHSSDF-GK-IT 543
C G++G CEC + R SQ+ E C +CS G+C+CGQC+CH+SD GK I
Sbjct: 472 CDTGYIGKNCECQTQG-RSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIY 530
Query: 544 GKYCECDDFSCVRYKGEMCSGHGQ--CSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLC 601
G+YCECD +C RY G++C G G+ C CG C C + G C C T+ C++ + C
Sbjct: 531 GQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRVEC 590
Query: 602 SGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDRGALHDENTCNRYC 661
SGRG+C C C C G C++CP CP C C EC KF++G C+ C
Sbjct: 591 SGRGRCRCNVCEC-HSGYQLPLCQECPGCPSPCGKYISCAECLKFEKGPF--GKNCSAAC 647
Query: 662 RDEIESVKELKDTGKDAVNCTYKNEDDCVVRFQY-YEDSSGKSILYVVEEPECPKGPDIL 720
+L + C ++ + C V + +D + ++YV E EC GP+I
Sbjct: 648 PG-----LQLSNNPVKGRTCKERDSEGCWVAYTLEQQDGMDRYLIYVDESRECVAGPNIA 702
Query: 721 VVLLSVMGAILLIGLAALLIWKLLITIHDRKEFAKFEEERARAKWDTANNPLYKEATSTF 780
++ + I+LIG+ L+IWK LI + D +E+ +FE+E+ +++W+ +NPL+K AT+T
Sbjct: 703 AIVGGTVAGIVLIGILLLVIWKALIHLSDLREYRRFEKEKLKSQWNN-DNPLFKSATTTV 761
Query: 781 TN 782
N
Sbjct: 762 MN 763
>gi|4504777 integrin, beta 7 [Homo sapiens]
Length = 798
Score = 568 bits (1465), Expect = e-162
Identities = 304/757 (40%), Positives = 434/757 (57%), Gaps = 31/757 (4%)
Query: 38 SCQQCLAVSPMCAWCSDEALPLGSP----RCDLKENLLKDNCAPESIEFPVSEARVLEDR 93
SCQ+C+ P CAWC RC +E LL C E +E P + VL+D+
Sbjct: 50 SCQKCILSHPSCAWCKQLNFTASGEAEARRCARREELLARGCPLEELEEPRGQQEVLQDQ 109
Query: 94 PLSDKGSGDSSQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDD 153
PLS G+ + TQ++PQR+ + LRP + + ++ + E YPVD+YYLMDLSYSMKDD
Sbjct: 110 PLSQGARGEGA--TQLAPQRVRVTLRPGEPQQLQVRFLRAEGYPVDLYYLMDLSYSMKDD 167
Query: 154 LWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPM 213
L ++ LG L +++++T ++RIGFG+FVDK V P++ + P L +PC C
Sbjct: 168 LERVRQLGHALLVRLQEVTHSVRIGFGSFVDKTVLPFVS-TVPSKLRHPCPTRLERCQSP 226
Query: 214 FGYKHVLTLTDQVTRFNEEVKKQSVSRNRDAPEGGFDAIMQATVCDEKIGWRNDASHLLV 273
F + HVL+LT F EV +QSVS N D+PEGGFDAI+QA +C E+IGWRN S LLV
Sbjct: 227 FSFHHVLSLTGDAQAFEREVGRQSVSGNLDSPEGGFDAILQAALCQEQIGWRN-VSRLLV 285
Query: 274 FTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYPSLGLMTEKLSQKNINLI 333
FT+D H A DG+L GI P+DG CH+ S+ YS ST DYPS+G + + LS NI I
Sbjct: 286 FTSDDTFHTAGDGKLGGIFMPSDGHCHLDSNGLYSRSTEFDYPSVGQVAQALSAANIQPI 345
Query: 334 FAVTENVVNLYQNYSELIPGTTVGVLSMDSSNVLQLIVDAYGKIRSKVELEVRDLPEELS 393
FAVT + +YQ S+LIP + VG LS DSSNV+QLI+DAY + S V LE LP +
Sbjct: 346 FAVTSAALPVYQELSKLIPKSAVGELSEDSSNVVQLIMDAYNSLSSTVTLEHSSLPPGVH 405
Query: 394 LSFNATCLNNEVIPGLK----SCMGLKIGDTVSFSIEAKVRGCPQEKEKSFTIKPVGFKD 449
+S+ + C E G C ++I TV+F + + C E ++ +GF +
Sbjct: 406 ISYESQCEGPEKREGKAEDRGQCNHVRINQTVTFWVSLQATHCLPEPH-LLRLRALGFSE 464
Query: 450 SLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECS-EEDYRPSQ 508
LIV++ CDC C + +P + C++G G +CGVC C PG LG CECS E P
Sbjct: 465 ELIVELHTLCDCNC-SDTQPQAPHCSDGQGHLQCGVCSCAPGRLGRLCECSVAELSSPDL 523
Query: 509 QDEC-SPREGQPVCSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQ 567
+ C +P P+CS +G C CG+C C G+ +G CECDD SC R++G +C G G+
Sbjct: 524 ESGCRAPNGTGPLCSGKGHCQCGRCSCS----GQSSGHLCECDDASCERHEGILCGGFGR 579
Query: 568 CSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKC 627
C CG C C ++ TG C C+ D+C+S G LCSG G+C+C C C+ G YG C++C
Sbjct: 580 CQCGVCHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKCNRCQCLD-GYYGALCDQC 638
Query: 628 PTCPDACTFKKECVECKKFDRGALHDENTCNRYC--RDEIESVKELKDTGKDAVNCTYKN 685
P C C ++C EC F G L C+ C + ++ + D G C +
Sbjct: 639 PGCKTPCERHRDCAECGAFRTGPL--ATNCSTACAHTNVTLALAPILDDGW----CKERT 692
Query: 686 EDDCVVRFQYYEDSSGKSILYVVEEPECPKGPDILVVLLSVMGAILLIGLAALLIWKLLI 745
D+ + F +D+ G +L V P+ ++L +G I+ +GL +L ++L +
Sbjct: 693 LDNQLFFFLVEDDARGTVVLRV--RPQEKGADHTQAIVLGCVGGIVAVGLGLVLAYRLSV 750
Query: 746 TIHDRKEFAKFEEERARAKWDTANNPLYKEATSTFTN 782
I+DR+E+++FE+E+ + W +NPLYK A +T N
Sbjct: 751 EIYDRREYSRFEKEQQQLNWKQDSNPLYKSAITTTIN 787
>gi|4504779 integrin, beta 8 precursor [Homo sapiens]
Length = 769
Score = 503 bits (1295), Expect = e-142
Identities = 265/741 (35%), Positives = 400/741 (53%), Gaps = 64/741 (8%)
Query: 10 LWATVLALGALAGVGVGGPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLG---SPRCDL 66
LWA + + G+G G N C + +SC +CLA+ P C WC E G S RCD+
Sbjct: 27 LWAAWV-FSLVLGLGQGEDNRCASSNAASCARCLALGPECGWCVQEDFISGGSRSERCDI 85
Query: 67 KENLLKDNCAPESIEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRPDDSKNF 126
NL+ C+ +SIE+P + + ++ TQV+P ++++LRP NF
Sbjct: 86 VSNLISKGCSVDSIEYPSVHVIIPTENEIN----------TQVTPGEVSIQLRPGAEANF 135
Query: 127 SIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKP 186
++V ++ YPVD+YYL+D+S SM +++ + ++G L+ +M + + R+GFG++VDK
Sbjct: 136 MLKVHPLKKYPVDLYYLVDVSASMHNNIEKLNSVGNDLSRKMAFFSRDFRLGFGSYVDKT 195
Query: 187 VSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVSRNRDAPE 246
VSPY+ I P E + N C D C+P GY HVL+LT+ +T F + V +Q +S N D PE
Sbjct: 196 VSPYISIHP-ERIHNQCSDYNLDCMPPHGYIHVLSLTENITEFEKAVHRQKISGNIDTPE 254
Query: 247 GGFDAIMQATVCDEKIGWRNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNH 306
GGFDA++QA VC+ IGWR +A LL+ TD +H+ALD +LAGIV PNDG CH+ +N
Sbjct: 255 GGFDAMLQAAVCESHIGWRKEAKRLLLVMTDQTSHLALDSKLAGIVVPNDGNCHL-KNNV 313
Query: 307 YSASTTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLSMDSSNV 366
Y STTM++PSLG ++EKL NIN+IFAV + Y++ L+PGT G + ++N+
Sbjct: 314 YVKSTTMEHPSLGQLSEKLIDNNINVIFAVQGKQFHWYKDLLPLLPGTIAGEIESKAANL 373
Query: 367 LQLIVDAYGKIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSIE 426
L+V+AY K+ S+V+++V + + + + A C + PG++ C + D V F++
Sbjct: 374 NNLVVEAYQKLISEVKVQVENQVQGIYFNITAICPDGSRKPGMEGCRNVTSNDEVLFNVT 433
Query: 427 AKVRGCPQEKEKSFT-IKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGV 485
++ C K++ IKP+GF ++ + + +C C C+ P + +C
Sbjct: 434 VTMKKCDVTGGKNYAIIKPIGFNETAKIHIHRNCSCQCEDNRGPKGKCVDETFLDSKCFQ 493
Query: 486 CRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCVCHSSDFGKITGK 545
C ++C E+ + + C + QPVCS RG C+CG+C CH GK+ GK
Sbjct: 494 CD------ENKCHFDEDQF---SSESCKSHKDQPVCSGRGVCVCGKCSCHKIKLGKVYGK 544
Query: 546 YCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNC-TTRTDTCMSSNGLLCSGR 604
YCE DDFSC + G +C+GHG+C G C C S W G C C + C++S G +CSGR
Sbjct: 545 YCEKDDFSCPYHHGNLCAGHGECEAGRCQCFSGWEGDRCQCPSAAAQHCVNSKGQVCSGR 604
Query: 605 GKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDRGALHDENTCNRYCRDE 664
G C CG C C P S G CE CPTC AC C++C LH N ++ D+
Sbjct: 605 GTCVCGRCECTDPRSIGRFCEHCPTCYTACKENWNCMQC-------LHPHN-LSQAILDQ 656
Query: 665 IESVKELKDTGKDAVNCTYKNEDDCVVRFQYYEDSSGKSILYVVEEPECPKGPDILVVLL 724
++ C + Q + YV + EC P L +
Sbjct: 657 CKT--------------------SCALMEQQH---------YVDQTSECFSSPSYLRIFF 687
Query: 725 SVMGAILLIGLAALLIWKLLI 745
+ LIGL +LI + +I
Sbjct: 688 IIFIVTFLIGLLKVLIIRQVI 708
>gi|54607027 integrin beta 4 isoform 2 precursor [Homo sapiens]
Length = 1805
Score = 450 bits (1158), Expect = e-126
Identities = 272/761 (35%), Positives = 404/761 (53%), Gaps = 49/761 (6%)
Query: 3 ARPRPRPLWATVLALGALAGVGVGGP--NICTTRGVSSCQQCLAVSPMCAWCSDEALPLG 60
A PRP P WA +L L AL V + G N C V SC +C+ V CA+C+DE
Sbjct: 2 AGPRPSP-WARLL-LAALISVSLSGTLANRCKKAPVKSCTECVRVDKDCAYCTDEMFR-- 57
Query: 61 SPRCDLKENLLKDNCAPESIEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRP 120
RC+ + LL C ESI S ++ E+ + + + +Q+SPQ + +RLRP
Sbjct: 58 DRRCNTQAELLAAGCQRESIVVMESSFQITEETQIDT-----TLRRSQMSPQGLRVRLRP 112
Query: 121 DDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFG 180
+ ++F ++V + + PVD+Y LMD S SM DDL +++ +G LA + +LTS+ IGFG
Sbjct: 113 GEERHFELEVFEPLESPVDLYILMDFSNSMSDDLDNLKKMGQNLARVLSQLTSDYTIGFG 172
Query: 181 AFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVSR 240
FVDK P + P E L+ P + P F +K+V++LT+ V F +++ + +S
Sbjct: 173 KFVDKVSVPQTDMRP-EKLKEPWPNSD----PPFSFKNVISLTEDVDEFRNKLQGERISG 227
Query: 241 NRDAPEGGFDAIMQATVCDEKIGWRNDASHLLVFTTDAKTHIALDGR--LAGIVQPNDGQ 298
N DAPEGGFDAI+Q VC IGWR D++HLLVF+T++ H DG LAGI+ ND +
Sbjct: 228 NLDAPEGGFDAILQTAVCTRDIGWRPDSTHLLVFSTESAFHYEADGANVLAGIMSRNDER 287
Query: 299 CHVGSDNHYSASTTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGV 358
CH+ + Y+ T DYPS+ + L++ NI IFAVT + Y+ P +++GV
Sbjct: 288 CHLDTTGTYTQYRTQDYPSVPTLVRLLAKHNIIPIFAVTNYSYSYYEKLHTYFPVSSLGV 347
Query: 359 LSMDSSNVLQLIVDAYGKIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIG 418
L DSSN+++L+ +A+ +IRS +++ D P L + ++ G
Sbjct: 348 LQEDSSNIVELLEEAFNRIRSNLDIRALDSPRGLRTEVTSKMFQKT----RTGSFHIRRG 403
Query: 419 DTVSFSIEAK---------VRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCD-CACQAQAE 468
+ + ++ + V P++++ + +KP F D L + CD C C+ Q E
Sbjct: 404 EVGIYQVQLRALEHVDGTHVCQLPEDQKGNIHLKP-SFSDGLKMDAGIICDVCTCELQKE 462
Query: 469 PNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPV-CSQRGEC 527
S RC+ NG F CG C C GW G C CS Q REG+ CS RGEC
Sbjct: 463 VRSARCSF-NGDFVCGQCVCSEGWSGQTCNCSTGSLSDIQP---CLREGEDKPCSGRGEC 518
Query: 528 LCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCT 587
CG CVC+ G+ G++CE D+F C R G +C+ G+CS G C+C+ WTG C+C
Sbjct: 519 QCGHCVCYGE--GRYEGQFCEYDNFQCPRTSGFLCNDRGRCSMGQCVCEPGWTGPSCDCP 576
Query: 588 TRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDT-CE--KCPTCPDACTFKKECVECK 644
TC+ SNG +C+GRG CECG C C Q Y DT CE P C + CV+C+
Sbjct: 577 LSNATCIDSNGGICNGRGHCECGRCHCHQQSLYTDTICEINYSAIHPGLCEDLRSCVQCQ 636
Query: 645 KFDRGALHDENTCNRYCRDEIESVKELKDTGKDAVNCTYKNE-DDCVVRFQYYEDSS--G 701
+ G TC C +++ V ELK + V C++++E DDC + D +
Sbjct: 637 AWGTGE-KKGRTCEE-CNFKVKMVDELKRAEEVVVRCSFRDEDDDCTYSYTMEGDGAPGP 694
Query: 702 KSILYVVEEPECPKGPDILVVLLSVMGAILLIGLAALLIWK 742
S + V ++ +CP G ++ L ++ + L+ L LL WK
Sbjct: 695 NSTVLVHKKKDCPPGSFWWLIPLLLL-LLPLLALLLLLCWK 734
>gi|54607035 integrin beta 4 isoform 1 precursor [Homo sapiens]
Length = 1822
Score = 450 bits (1158), Expect = e-126
Identities = 272/761 (35%), Positives = 404/761 (53%), Gaps = 49/761 (6%)
Query: 3 ARPRPRPLWATVLALGALAGVGVGGP--NICTTRGVSSCQQCLAVSPMCAWCSDEALPLG 60
A PRP P WA +L L AL V + G N C V SC +C+ V CA+C+DE
Sbjct: 2 AGPRPSP-WARLL-LAALISVSLSGTLANRCKKAPVKSCTECVRVDKDCAYCTDEMFR-- 57
Query: 61 SPRCDLKENLLKDNCAPESIEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRP 120
RC+ + LL C ESI S ++ E+ + + + +Q+SPQ + +RLRP
Sbjct: 58 DRRCNTQAELLAAGCQRESIVVMESSFQITEETQIDT-----TLRRSQMSPQGLRVRLRP 112
Query: 121 DDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFG 180
+ ++F ++V + + PVD+Y LMD S SM DDL +++ +G LA + +LTS+ IGFG
Sbjct: 113 GEERHFELEVFEPLESPVDLYILMDFSNSMSDDLDNLKKMGQNLARVLSQLTSDYTIGFG 172
Query: 181 AFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVSR 240
FVDK P + P E L+ P + P F +K+V++LT+ V F +++ + +S
Sbjct: 173 KFVDKVSVPQTDMRP-EKLKEPWPNSD----PPFSFKNVISLTEDVDEFRNKLQGERISG 227
Query: 241 NRDAPEGGFDAIMQATVCDEKIGWRNDASHLLVFTTDAKTHIALDGR--LAGIVQPNDGQ 298
N DAPEGGFDAI+Q VC IGWR D++HLLVF+T++ H DG LAGI+ ND +
Sbjct: 228 NLDAPEGGFDAILQTAVCTRDIGWRPDSTHLLVFSTESAFHYEADGANVLAGIMSRNDER 287
Query: 299 CHVGSDNHYSASTTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGV 358
CH+ + Y+ T DYPS+ + L++ NI IFAVT + Y+ P +++GV
Sbjct: 288 CHLDTTGTYTQYRTQDYPSVPTLVRLLAKHNIIPIFAVTNYSYSYYEKLHTYFPVSSLGV 347
Query: 359 LSMDSSNVLQLIVDAYGKIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIG 418
L DSSN+++L+ +A+ +IRS +++ D P L + ++ G
Sbjct: 348 LQEDSSNIVELLEEAFNRIRSNLDIRALDSPRGLRTEVTSKMFQKT----RTGSFHIRRG 403
Query: 419 DTVSFSIEAK---------VRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCD-CACQAQAE 468
+ + ++ + V P++++ + +KP F D L + CD C C+ Q E
Sbjct: 404 EVGIYQVQLRALEHVDGTHVCQLPEDQKGNIHLKP-SFSDGLKMDAGIICDVCTCELQKE 462
Query: 469 PNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPV-CSQRGEC 527
S RC+ NG F CG C C GW G C CS Q REG+ CS RGEC
Sbjct: 463 VRSARCSF-NGDFVCGQCVCSEGWSGQTCNCSTGSLSDIQP---CLREGEDKPCSGRGEC 518
Query: 528 LCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCT 587
CG CVC+ G+ G++CE D+F C R G +C+ G+CS G C+C+ WTG C+C
Sbjct: 519 QCGHCVCYGE--GRYEGQFCEYDNFQCPRTSGFLCNDRGRCSMGQCVCEPGWTGPSCDCP 576
Query: 588 TRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDT-CE--KCPTCPDACTFKKECVECK 644
TC+ SNG +C+GRG CECG C C Q Y DT CE P C + CV+C+
Sbjct: 577 LSNATCIDSNGGICNGRGHCECGRCHCHQQSLYTDTICEINYSAIHPGLCEDLRSCVQCQ 636
Query: 645 KFDRGALHDENTCNRYCRDEIESVKELKDTGKDAVNCTYKNE-DDCVVRFQYYEDSS--G 701
+ G TC C +++ V ELK + V C++++E DDC + D +
Sbjct: 637 AWGTGE-KKGRTCEE-CNFKVKMVDELKRAEEVVVRCSFRDEDDDCTYSYTMEGDGAPGP 694
Query: 702 KSILYVVEEPECPKGPDILVVLLSVMGAILLIGLAALLIWK 742
S + V ++ +CP G ++ L ++ + L+ L LL WK
Sbjct: 695 NSTVLVHKKKDCPPGSFWWLIPLLLL-LLPLLALLLLLCWK 734
>gi|54607033 integrin beta 4 isoform 3 precursor [Homo sapiens]
Length = 1752
Score = 450 bits (1158), Expect = e-126
Identities = 272/761 (35%), Positives = 404/761 (53%), Gaps = 49/761 (6%)
Query: 3 ARPRPRPLWATVLALGALAGVGVGGP--NICTTRGVSSCQQCLAVSPMCAWCSDEALPLG 60
A PRP P WA +L L AL V + G N C V SC +C+ V CA+C+DE
Sbjct: 2 AGPRPSP-WARLL-LAALISVSLSGTLANRCKKAPVKSCTECVRVDKDCAYCTDEMFR-- 57
Query: 61 SPRCDLKENLLKDNCAPESIEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRP 120
RC+ + LL C ESI S ++ E+ + + + +Q+SPQ + +RLRP
Sbjct: 58 DRRCNTQAELLAAGCQRESIVVMESSFQITEETQIDT-----TLRRSQMSPQGLRVRLRP 112
Query: 121 DDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFG 180
+ ++F ++V + + PVD+Y LMD S SM DDL +++ +G LA + +LTS+ IGFG
Sbjct: 113 GEERHFELEVFEPLESPVDLYILMDFSNSMSDDLDNLKKMGQNLARVLSQLTSDYTIGFG 172
Query: 181 AFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVSR 240
FVDK P + P E L+ P + P F +K+V++LT+ V F +++ + +S
Sbjct: 173 KFVDKVSVPQTDMRP-EKLKEPWPNSD----PPFSFKNVISLTEDVDEFRNKLQGERISG 227
Query: 241 NRDAPEGGFDAIMQATVCDEKIGWRNDASHLLVFTTDAKTHIALDGR--LAGIVQPNDGQ 298
N DAPEGGFDAI+Q VC IGWR D++HLLVF+T++ H DG LAGI+ ND +
Sbjct: 228 NLDAPEGGFDAILQTAVCTRDIGWRPDSTHLLVFSTESAFHYEADGANVLAGIMSRNDER 287
Query: 299 CHVGSDNHYSASTTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGV 358
CH+ + Y+ T DYPS+ + L++ NI IFAVT + Y+ P +++GV
Sbjct: 288 CHLDTTGTYTQYRTQDYPSVPTLVRLLAKHNIIPIFAVTNYSYSYYEKLHTYFPVSSLGV 347
Query: 359 LSMDSSNVLQLIVDAYGKIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIG 418
L DSSN+++L+ +A+ +IRS +++ D P L + ++ G
Sbjct: 348 LQEDSSNIVELLEEAFNRIRSNLDIRALDSPRGLRTEVTSKMFQKT----RTGSFHIRRG 403
Query: 419 DTVSFSIEAK---------VRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCD-CACQAQAE 468
+ + ++ + V P++++ + +KP F D L + CD C C+ Q E
Sbjct: 404 EVGIYQVQLRALEHVDGTHVCQLPEDQKGNIHLKP-SFSDGLKMDAGIICDVCTCELQKE 462
Query: 469 PNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPV-CSQRGEC 527
S RC+ NG F CG C C GW G C CS Q REG+ CS RGEC
Sbjct: 463 VRSARCSF-NGDFVCGQCVCSEGWSGQTCNCSTGSLSDIQP---CLREGEDKPCSGRGEC 518
Query: 528 LCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCT 587
CG CVC+ G+ G++CE D+F C R G +C+ G+CS G C+C+ WTG C+C
Sbjct: 519 QCGHCVCYGE--GRYEGQFCEYDNFQCPRTSGFLCNDRGRCSMGQCVCEPGWTGPSCDCP 576
Query: 588 TRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDT-CE--KCPTCPDACTFKKECVECK 644
TC+ SNG +C+GRG CECG C C Q Y DT CE P C + CV+C+
Sbjct: 577 LSNATCIDSNGGICNGRGHCECGRCHCHQQSLYTDTICEINYSAIHPGLCEDLRSCVQCQ 636
Query: 645 KFDRGALHDENTCNRYCRDEIESVKELKDTGKDAVNCTYKNE-DDCVVRFQYYEDSS--G 701
+ G TC C +++ V ELK + V C++++E DDC + D +
Sbjct: 637 AWGTGE-KKGRTCEE-CNFKVKMVDELKRAEEVVVRCSFRDEDDDCTYSYTMEGDGAPGP 694
Query: 702 KSILYVVEEPECPKGPDILVVLLSVMGAILLIGLAALLIWK 742
S + V ++ +CP G ++ L ++ + L+ L LL WK
Sbjct: 695 NSTVLVHKKKDCPPGSFWWLIPLLLL-LLPLLALLLLLCWK 734
>gi|4758614 integrin, beta-like 1 (with EGF-like repeat domains)
[Homo sapiens]
Length = 494
Score = 151 bits (381), Expect = 3e-36
Identities = 74/186 (39%), Positives = 97/186 (52%), Gaps = 20/186 (10%)
Query: 459 CDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQ 518
C+C + + + G+G CG C C GW G +CE + + C+ +G+
Sbjct: 178 CECDDRECIDDETEEICGGHGKCYCGNCYCKAGWHGDKCEFQCDITPWESKRRCTSPDGK 237
Query: 519 PVCSQRGECLCGQCVCH----SSDFGKITGKYCECDDFSC----VRYKGEMCSGHGQCSC 570
+CS RG C+CG+C CH + D+G I G CECD+ C RY + CSGHGQC+C
Sbjct: 238 -ICSNRGTCVCGECTCHDVDPTGDWGDIHGDTCECDERDCRAVYDRYSDDFCSGHGQCNC 296
Query: 571 GDCLCDSDWTGYYC----NCTTRTD----TCMSSNGLLCSGRGKCECGSCVCIQPGS--- 619
G C C + W G C +CT + C S+ L CSGRGKCECG C C PG
Sbjct: 297 GRCDCKAGWYGKKCEHPQSCTLSAEESIRKCQGSSDLPCSGRGKCECGKCTCYPPGDRRV 356
Query: 620 YGDTCE 625
YG TCE
Sbjct: 357 YGKTCE 362
Score = 136 bits (343), Expect = 7e-32
Identities = 74/205 (36%), Positives = 99/205 (48%), Gaps = 30/205 (14%)
Query: 459 CDCA---CQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCE-------CSEEDYRPSQ 508
C+C C+A + S +G+G CG C C GW G +CE +EE R Q
Sbjct: 269 CECDERDCRAVYDRYSDDFCSGHGQCNCGRCDCKAGWYGKKCEHPQSCTLSAEESIRKCQ 328
Query: 509 QDECSPREGQPVCSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQC 568
P CS RG+C CG+C C+ ++ GK CECDD C G +C GHG C
Sbjct: 329 GSSDLP------CSGRGKCECGKCTCYPPGDRRVYGKTCECDDRRCEDLDGVVCGGHGTC 382
Query: 569 SCGDCLCDSDWTGYY------CNCTTR--TDTCMSSNGLLCSGRGKCECGSCVCIQPGSY 620
SCG C+C+ W G CN T + C S++G+LCSG+G C CG C+C Y
Sbjct: 383 SCGRCVCERGWFGKLCQHPRKCNMTEEQSKNLCESADGILCSGKGSCHCGKCICSAEEWY 442
Query: 621 --GDTCEKCPTCPDACTFKKECVEC 643
G+ C+ C D K + + C
Sbjct: 443 ISGEFCD----CDDRDCDKHDGLIC 463
Score = 128 bits (322), Expect = 2e-29
Identities = 62/165 (37%), Positives = 86/165 (52%), Gaps = 16/165 (9%)
Query: 477 GNGTFECGVCRCGPGWLGSQCECSEE-DYRPSQQDECSPREGQPVCSQRGECLCGQCVCH 535
G+G +CG C+C GW G C+ D + ++ +CS G C CG+C C
Sbjct: 106 GHGKCDCGKCKCDQGWYGDACQYPTNCDLTKKKSNQMCKNSQDIICSNAGTCHCGRCKCD 165
Query: 536 SSD-FGKITGKYCECDDFSCVRYKGE-MCSGHGQCSCGDCLCDSDWTG----YYCNCT-- 587
+SD G + GK+CECDD C+ + E +C GHG+C CG+C C + W G + C+ T
Sbjct: 166 NSDGSGLVYGKFCECDDRECIDDETEEICGGHGKCYCGNCYCKAGWHGDKCEFQCDITPW 225
Query: 588 TRTDTCMSSNGLLCSGRGKCECGSCVC--IQPGS-----YGDTCE 625
C S +G +CS RG C CG C C + P +GDTCE
Sbjct: 226 ESKRRCTSPDGKICSNRGTCVCGECTCHDVDPTGDWGDIHGDTCE 270
Score = 116 bits (290), Expect = 9e-26
Identities = 59/180 (32%), Positives = 80/180 (44%), Gaps = 15/180 (8%)
Query: 492 WLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCVCHSSDFGKITGKYCECDD 551
W G+ C S + + P G +C RG C CG C+CH ++ G G CEC +
Sbjct: 35 WPGAACRLSRAESERRCRAPGQP-PGAALCHGRGRCDCGVCICHVTEPGMFFGPLCECHE 93
Query: 552 FSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTD--------TCMSSNGLLCSG 603
+ C Y G C+GHG+C CG C CD W G C T D C +S ++CS
Sbjct: 94 WVCETYDGSTCAGHGKCDCGKCKCDQGWYGDACQYPTNCDLTKKKSNQMCKNSQDIICSN 153
Query: 604 RGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDRGALHDENTC-NRYCR 662
G C CG C C G K C D +EC++ + + H + C N YC+
Sbjct: 154 AGTCHCGRCKCDNSDGSGLVYGKFCECDD-----RECIDDETEEICGGHGKCYCGNCYCK 208
Score = 100 bits (248), Expect = 7e-21
Identities = 45/128 (35%), Positives = 72/128 (56%), Gaps = 5/128 (3%)
Query: 459 CDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDE--CSPRE 516
C+C + + + C G+GT CG C C GW G C+ + +Q + C +
Sbjct: 361 CECDDRRCEDLDGVVCG-GHGTCSCGRCVCERGWFGKLCQHPRKCNMTEEQSKNLCESAD 419
Query: 517 GQPVCSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCD 576
G +CS +G C CG+C+C + ++ I+G++C+CDD C ++ G +C+G+G CSCG+C C
Sbjct: 420 GI-LCSGKGSCHCGKCICSAEEW-YISGEFCDCDDRDCDKHDGLICTGNGICSCGNCECW 477
Query: 577 SDWTGYYC 584
W G C
Sbjct: 478 DGWNGNAC 485
>gi|157384973 tenascin R [Homo sapiens]
Length = 1358
Score = 87.0 bits (214), Expect = 6e-17
Identities = 58/181 (32%), Positives = 78/181 (43%), Gaps = 35/181 (19%)
Query: 460 DCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCE-------CSEEDYRPSQQ--- 509
+ A Q + H +GN +FE C C GW G C CS Q
Sbjct: 162 ESAATGQLDYIPHCSGHGNFSFESCGCICNEGWFGKNCSEPYCPLGCSSRGVCVDGQCIC 221
Query: 510 ------DECSPREGQPVCSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCS 563
D+CS CS RG C+ G+CVC G+ +C + C G+ CS
Sbjct: 222 DSEYSGDDCSELRCPTDCSSRGLCVDGECVCEEPYTGE------DCRELRC---PGD-CS 271
Query: 564 GHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDT 623
G G+C+ G CLC+ + G C C+++ CSGRG+CE G CVC + G G
Sbjct: 272 GKGRCANGTCLCEEGYVGEDCG----QRQCLNA----CSGRGQCEEGLCVC-EEGYQGPD 322
Query: 624 C 624
C
Sbjct: 323 C 323
Score = 49.3 bits (116), Expect = 1e-05
Identities = 32/84 (38%), Positives = 40/84 (47%), Gaps = 14/84 (16%)
Query: 562 CSGHGQCS---CGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPG 618
CSGHG S CG C+C+ W G C+ C L CS RG C G C+C
Sbjct: 175 CSGHGNFSFESCG-CICNEGWFGKNCS----EPYCP----LGCSSRGVCVDGQCICDSEY 225
Query: 619 SYGDTCEKCPTCPDACTFKKECVE 642
S GD C + CP C+ + CV+
Sbjct: 226 S-GDDCSEL-RCPTDCSSRGLCVD 247
>gi|188528648 tenascin XB isoform 1 precursor [Homo sapiens]
Length = 4242
Score = 84.3 bits (207), Expect = 4e-16
Identities = 79/263 (30%), Positives = 99/263 (37%), Gaps = 62/263 (23%)
Query: 461 CACQAQ---AEPNSHRCNNG---NGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSP 514
C C+A + + C G G E G C C PG+ G D+C
Sbjct: 233 CVCRAGFSGPDCSQRSCPRGCSQRGRCEGGRCVCDPGYTG---------------DDCGM 277
Query: 515 REGQPVCSQRGECLCGQCVCHSSDFGKITG-KYC--------ECDDFSCV---RYKGEMC 562
R CSQRG C G+CVC+ G+ G + C C D CV Y GE C
Sbjct: 278 RSCPRGCSQRGRCENGRCVCNPGYTGEDCGVRSCPRGCSQRGRCKDGRCVCDPGYTGEDC 337
Query: 563 SGH---------GQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCV 613
G+C G C+C +TG C+ T TC C GRG+CE G C+
Sbjct: 338 GTRSCPWDCGEGGRCVDGRCVCWPGYTGEDCS----TRTCPRD----CRGRGRCEDGECI 389
Query: 614 CIQPGSYGDTCEKCPTCPDACTFKKECVE----CKKFDRGALHDENTCNRYCRDEIESVK 669
C G GD C +CP C + C + C G C R CR +
Sbjct: 390 C-DTGYSGDDC-GVRSCPGDCNQRGRCEDGRCVCWPGYTGTDCGSRACPRDCRG-----R 442
Query: 670 ELKDTGKDAVNCTYKNEDDCVVR 692
+ G N Y E DC VR
Sbjct: 443 GRCENGVCVCNAGYSGE-DCGVR 464
Score = 82.8 bits (203), Expect = 1e-15
Identities = 71/240 (29%), Positives = 95/240 (39%), Gaps = 59/240 (24%)
Query: 458 DCDCACQ---AQAEPNSHRCNN---GNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDE 511
D C C + S RC G+G E GVC C G+ G ++
Sbjct: 509 DGRCVCNPGFTGEDCGSRRCPGDCRGHGLCEDGVCVCDAGYSG---------------ED 553
Query: 512 CSPREGQPVCSQRGECLCGQCVCHSSDFGKITG---------KYCECDDFSCVRYKGEM- 561
CS R C RG+CL G+CVC G+ G ++ C D C+ ++G +
Sbjct: 554 CSTRSCPGGCRGRGQCLDGRCVCEDGYSGEDCGVRQCPNDCSQHGVCQDGVCICWEGYVS 613
Query: 562 -----------CSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECG 610
C G G+C G CLCD +TG C T C + C GRG+C G
Sbjct: 614 EDCSIRTCPSNCHGRGRCEEGRCLCDPGYTGPTC----ATRMCPAD----CRGRGRCVQG 665
Query: 611 SCVCIQPGSYGDTC--EKCP--TCPDACTFKKEC----VECKKFDRGALHDENTCNRYCR 662
C+C G G+ C E+ P CP C ++ C C + RG TC CR
Sbjct: 666 VCLC-HVGYGGEDCGQEEPPASACPGGCGPRELCRAGQCVCVEGFRGPDCAIQTCPGDCR 724
Score = 77.8 bits (190), Expect = 4e-14
Identities = 60/192 (31%), Positives = 83/192 (43%), Gaps = 26/192 (13%)
Query: 454 QVTFDCDCACQAQA---EPNSHRCNNGNGTFECG--VCRCGPGWLGSQCECSEEDYRPSQ 508
Q T C C AQA + + + +G F+ C C PGW G C + P
Sbjct: 120 QCTGGC-CPASAQAGTGQTDVRTLCSLHGVFDLSRCTCSCEPGWGGPTCSDPTDAEIPPS 178
Query: 509 QDECSPREGQPVCSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQC 568
+ C+ +G C+ G+CVC F TG C SC G+ C G G+C
Sbjct: 179 SPPSASGSCPDDCNDQGRCVRGRCVC----FPGYTGPSCGWP--SC---PGD-CQGRGRC 228
Query: 569 SCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKCP 628
G C+C + ++G C+ +C CS RG+CE G CVC PG GD C
Sbjct: 229 VQGVCVCRAGFSGPDCS----QRSCPRG----CSQRGRCEGGRCVC-DPGYTGDDC-GMR 278
Query: 629 TCPDACTFKKEC 640
+CP C+ + C
Sbjct: 279 SCPRGCSQRGRC 290
Score = 77.8 bits (190), Expect = 4e-14
Identities = 57/184 (30%), Positives = 78/184 (42%), Gaps = 24/184 (13%)
Query: 460 DCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLG-SQCECSEEDYRPSQQD-ECSPREG 517
DC + + E CN G +CGV C G +CE P +C R
Sbjct: 438 DCRGRGRCENGVCVCNAGYSGEDCGVRSCPGDCRGRGRCESGRCMCWPGYTGRDCGTRAC 497
Query: 518 QPVCSQRGECLCGQCVCHSSDFGKITG-KYCECDDFSCVRYKGEMCSGHGQCSCGDCLCD 576
C RG C+ G+CVC+ G+ G + C D C GHG C G C+CD
Sbjct: 498 PGDCRGRGRCVDGRCVCNPGFTGEDCGSRRCPGD-----------CRGHGLCEDGVCVCD 546
Query: 577 SDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTF 636
+ ++G C+ T +C C GRG+C G CVC + G G+ C CP+ C+
Sbjct: 547 AGYSGEDCS----TRSCPGG----CRGRGQCLDGRCVC-EDGYSGEDC-GVRQCPNDCSQ 596
Query: 637 KKEC 640
C
Sbjct: 597 HGVC 600
Score = 74.7 bits (182), Expect = 3e-13
Identities = 58/176 (32%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 460 DCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYR----PSQQ-DECSP 514
DC + + E C+ G +CGV C PG + C ED R P +C
Sbjct: 376 DCRGRGRCEDGECICDTGYSGDDCGVRSC-PGDCNQRGRC--EDGRCVCWPGYTGTDCGS 432
Query: 515 REGQPVCSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCL 574
R C RG C G CVC++ G+ +C SC G+ C G G+C G C+
Sbjct: 433 RACPRDCRGRGRCENGVCVCNAGYSGE------DCGVRSC---PGD-CRGRGRCESGRCM 482
Query: 575 CDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTC--EKCP 628
C +TG C T C C GRG+C G CVC PG G+ C +CP
Sbjct: 483 CWPGYTGRDCG----TRACPGD----CRGRGRCVDGRCVC-NPGFTGEDCGSRRCP 529
Score = 73.6 bits (179), Expect = 7e-13
Identities = 56/202 (27%), Positives = 82/202 (40%), Gaps = 38/202 (18%)
Query: 463 CQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCS 522
C ++A P R G G E GVC C G+ G ++C R C
Sbjct: 430 CGSRACPRDCR---GRGRCENGVCVCNAGYSG---------------EDCGVRSCPGDCR 471
Query: 523 QRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGY 582
RG C G+C+C G+ +C +C G+ C G G+C G C+C+ +TG
Sbjct: 472 GRGRCESGRCMCWPGYTGR------DCGTRAC---PGD-CRGRGRCVDGRCVCNPGFTGE 521
Query: 583 YCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVE 642
C + C C G G CE G CVC G G+ C +CP C + +C++
Sbjct: 522 DCG----SRRCPGD----CRGHGLCEDGVCVC-DAGYSGEDCST-RSCPGGCRGRGQCLD 571
Query: 643 CKKFDRGALHDENTCNRYCRDE 664
+ E+ R C ++
Sbjct: 572 GRCVCEDGYSGEDCGVRQCPND 593
Score = 62.4 bits (150), Expect = 2e-09
Identities = 48/155 (30%), Positives = 63/155 (40%), Gaps = 30/155 (19%)
Query: 476 NGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCVCH 535
+G G E G C C PG+ G C + R C RG C+ G C+CH
Sbjct: 626 HGRGRCEEGRCLCDPGYTGPTC---------------ATRMCPADCRGRGRCVQGVCLCH 670
Query: 536 SSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMS 595
+G G+ C ++ G C C G C+C + G C TC
Sbjct: 671 VG-YG---GEDCGQEEPPASACPGG-CGPRELCRAGQCVCVEGFRGPDC----AIQTCPG 721
Query: 596 SNGLLCSGRGKCECGSCVCIQPGSYGDTC-EKCPT 629
C GRG+C GSCVC + G G+ C E+ PT
Sbjct: 722 D----CRGRGECHDGSCVC-KDGYAGEDCGEEVPT 751
Score = 50.1 bits (118), Expect = 8e-06
Identities = 40/139 (28%), Positives = 59/139 (42%), Gaps = 23/139 (16%)
Query: 561 MCSGHG-----QCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLL-------CSGRGKCE 608
+CS HG +C+C C+ W G C+ T + SS C+ +G+C
Sbjct: 142 LCSLHGVFDLSRCTCS---CEPGWGGPTCSDPTDAEIPPSSPPSASGSCPDDCNDQGRCV 198
Query: 609 CGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVE----CKKFDRGALHDENTCNRYC--R 662
G CVC PG G +C P+CP C + CV+ C+ G + +C R C R
Sbjct: 199 RGRCVCF-PGYTGPSCG-WPSCPGDCQGRGRCVQGVCVCRAGFSGPDCSQRSCPRGCSQR 256
Query: 663 DEIESVKELKDTGKDAVNC 681
E + + D G +C
Sbjct: 257 GRCEGGRCVCDPGYTGDDC 275
>gi|153946395 tenascin C precursor [Homo sapiens]
Length = 2201
Score = 83.2 bits (204), Expect = 9e-16
Identities = 64/215 (29%), Positives = 86/215 (40%), Gaps = 34/215 (15%)
Query: 460 DCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLG------SQCECSEEDYRPSQQDECS 513
DC + + C++G +CG +C G G QC C +E Y ++CS
Sbjct: 380 DCHNRGRCVDGRCECDDGFTGADCGELKCPNGCSGHGRCVNGQCVC-DEGY---TGEDCS 435
Query: 514 PREGQPVCSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDC 573
C RG C+ G+CVC G +C D SC C HG+C G C
Sbjct: 436 QLRCPNDCHSRGRCVEGKCVCEQGFKG------YDCSDMSC----PNDCHQHGRCVNGMC 485
Query: 574 LCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDA 633
+CD +TG C R C CS RG C G CVC + G G C + +CP+
Sbjct: 486 VCDDGYTGEDC----RDRQCPRD----CSNRGLCVDGQCVC-EDGFTGPDCAEL-SCPND 535
Query: 634 CTFKKECVE----CKKFDRGALHDENTCNRYCRDE 664
C + CV C + G E C C +
Sbjct: 536 CHGQGRCVNGQCVCHEGFMGKDCKEQRCPSDCHGQ 570
Score = 77.8 bits (190), Expect = 4e-14
Identities = 65/220 (29%), Positives = 87/220 (39%), Gaps = 29/220 (13%)
Query: 484 GVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRG---ECLCGQCVCHSSDFG 540
G C C G+ G C + Q C EGQ VC + +C +C + G
Sbjct: 328 GTCYCEEGFTGEDCGKPTCPHACHTQGRCE--EGQCVCDEGFAGVDCSEKRCPADCHNRG 385
Query: 541 KITGKYCECDDFSCVRYKGEM-----CSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMS 595
+ CECDD GE+ CSGHG+C G C+CD +TG C+ + C S
Sbjct: 386 RCVDGRCECDDGFTGADCGELKCPNGCSGHGRCVNGQCVCDEGYTGEDCSQLRCPNDCHS 445
Query: 596 SNGLLCSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVE----CKKFDRGAL 651
RG+C G CVC Q G G C +CP+ C CV C G
Sbjct: 446 --------RGRCVEGKCVCEQ-GFKGYDCSDM-SCPNDCHQHGRCVNGMCVCDDGYTGED 495
Query: 652 HDENTCNRYCRD-----EIESVKELKDTGKDAVNCTYKNE 686
+ C R C + + + V E TG D + N+
Sbjct: 496 CRDRQCPRDCSNRGLCVDGQCVCEDGFTGPDCAELSCPND 535
Score = 77.4 bits (189), Expect = 5e-14
Identities = 74/301 (24%), Positives = 106/301 (35%), Gaps = 75/301 (24%)
Query: 420 TVSFSIEAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCN---- 475
T +I + GC + + + ++L+ + C +P + R +
Sbjct: 101 THRINIPRRACGCAAAPDVKELLSRLEELENLVSSLREQCTAGAGCCLQPATGRLDTRPF 160
Query: 476 -NGNGTFE---CGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCGQ 531
+G G F CG C C PGW G C + EC C RG C+ GQ
Sbjct: 161 CSGRGNFSTEGCG-CVCEPGWKGPNCS----------EPECPGN-----CHLRGRCIDGQ 204
Query: 532 CVCHS----------------SDFGKITGKYCEC-DDFSCVRYKGEMC-----SGHGQCS 569
C+C +D GK C C + ++ E+C HG C
Sbjct: 205 CICDDGFTGEDCSQLACPSDCNDQGKCVNGVCICFEGYAGADCSREICPVPCSEEHGTCV 264
Query: 570 CGDCLCDSDWTGYYC-------NCTTR----TDTCMSSNGLL------------CSGRGK 606
G C+C + G C NC R + C+ G C RG+
Sbjct: 265 DGLCVCHDGFAGDDCNKPLCLNNCYNRGRCVENECVCDEGFTGEDCSELICPNDCFDRGR 324
Query: 607 CECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVE----CKKFDRGALHDENTCNRYCR 662
C G+C C + G G+ C K PTCP AC + C E C + G E C C
Sbjct: 325 CINGTCYC-EEGFTGEDCGK-PTCPHACHTQGRCEEGQCVCDEGFAGVDCSEKRCPADCH 382
Query: 663 D 663
+
Sbjct: 383 N 383
Score = 70.9 bits (172), Expect = 4e-12
Identities = 52/187 (27%), Positives = 73/187 (39%), Gaps = 44/187 (23%)
Query: 457 FDC-DCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQC-------ECSEEDYRPSQ 508
+DC D +C + RC NG +C C G+ G C +CS
Sbjct: 463 YDCSDMSCPNDCHQHG-RCVNG-------MCVCDDGYTGEDCRDRQCPRDCSNRGLCVDG 514
Query: 509 QDECSPREGQPVCSQ---------RGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKG 559
Q C P C++ +G C+ GQCVCH GK +C + C
Sbjct: 515 QCVCEDGFTGPDCAELSCPNDCHGQGRCVNGQCVCHEGFMGK------DCKEQRC----P 564
Query: 560 EMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGS 619
C G G+C G C+C +TG C +C S C+ G+C G C+C G
Sbjct: 565 SDCHGQGRCVDGQCICHEGFTGLDCG----QHSCPSD----CNNLGQCVSGRCIC-NEGY 615
Query: 620 YGDTCEK 626
G+ C +
Sbjct: 616 SGEDCSE 622
>gi|169790825 odz, odd Oz/ten-m homolog 4 [Homo sapiens]
Length = 2769
Score = 79.7 bits (195), Expect = 1e-14
Identities = 58/194 (29%), Positives = 78/194 (40%), Gaps = 35/194 (18%)
Query: 476 NGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCVCH 535
+GNG + G C C GW G++C+ P+ Q C CS G C+ G C+C+
Sbjct: 602 SGNGQYMKGRCLCHSGWKGAECDV------PTNQ--CI----DVACSNHGTCITGTCICN 649
Query: 536 SSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMS 595
G+ C++ C+ CSG G C G+C C W G NC T TC+
Sbjct: 650 PGYKGE------SCEEVDCM---DPTCSGRGVCVRGECHCSVGWGG--TNCETPRATCLD 698
Query: 596 SNGLLCSGRGKC--ECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECV----ECKKFDRG 649
CSG G + G C C P G C C C CV C+ G
Sbjct: 699 Q----CSGHGTFLPDTGLCSC-DPSWTGHDC-SIEICAADCGGHGVCVGGTCRCEDGWMG 752
Query: 650 ALHDENTCNRYCRD 663
A D+ C+ C +
Sbjct: 753 AACDQRACHPRCAE 766
Score = 72.4 bits (176), Expect = 2e-12
Identities = 53/161 (32%), Positives = 64/161 (39%), Gaps = 33/161 (20%)
Query: 477 GNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPV-CSQRGECLCGQCVCH 535
GNG G C C G+LG C R PV CS G+ + G+C+CH
Sbjct: 572 GNGDCISGTCHCFLGFLGPDCG----------------RASCPVLCSGNGQYMKGRCLCH 615
Query: 536 SSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMS 595
S G C+ C+ CS HG C G C+C+ + G C CM
Sbjct: 616 SG----WKGAECDVPTNQCIDVA---CSNHGTCITGTCICNPGYKGESC----EEVDCMD 664
Query: 596 SNGLLCSGRGKCECGSCVCIQPGSYGDTCE-KCPTCPDACT 635
CSGRG C G C C G G CE TC D C+
Sbjct: 665 PT---CSGRGVCVRGECHC-SVGWGGTNCETPRATCLDQCS 701
Score = 72.0 bits (175), Expect = 2e-12
Identities = 42/125 (33%), Positives = 57/125 (45%), Gaps = 18/125 (14%)
Query: 521 CSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWT 580
C G+C+ G C C G +C SC +CSG+GQ G CLC S W
Sbjct: 570 CYGNGDCISGTCHCFLGFLGP------DCGRASC----PVLCSGNGQYMKGRCLCHSGWK 619
Query: 581 GYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKEC 640
G C T+ C+ + CS G C G+C+C PG G++CE+ C+ + C
Sbjct: 620 G--AECDVPTNQCID---VACSNHGTCITGTCIC-NPGYKGESCEEVDCMDPTCSGRGVC 673
Query: 641 V--EC 643
V EC
Sbjct: 674 VRGEC 678
Score = 65.1 bits (157), Expect = 2e-10
Identities = 56/204 (27%), Positives = 68/204 (33%), Gaps = 65/204 (31%)
Query: 474 CNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCV 533
C+N +GT G C C PG+ G CE + +C P CS RG C+ G+C
Sbjct: 635 CSN-HGTCITGTCICNPGYKGESCE----------EVDCM----DPTCSGRGVCVRGECH 679
Query: 534 CH---------------------SSDFGKITGKYCECDD----FSC-VRYKGEMCSGHGQ 567
C F TG C CD C + C GHG
Sbjct: 680 CSVGWGGTNCETPRATCLDQCSGHGTFLPDTG-LCSCDPSWTGHDCSIEICAADCGGHGV 738
Query: 568 CSCGDCLCDSDWTGYYCN---CTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTC 624
C G C C+ W G C+ C R C+ G C G C C PG G+ C
Sbjct: 739 CVGGTCRCEDGWMGAACDQRACHPR-----------CAEHGTCRDGKCEC-SPGWNGEHC 786
Query: 625 EKC--------PTCPDACTFKKEC 640
CP C C
Sbjct: 787 TIAHYLDRVVKEGCPGLCNGNGRC 810
Score = 58.2 bits (139), Expect = 3e-08
Identities = 48/183 (26%), Positives = 69/183 (37%), Gaps = 41/183 (22%)
Query: 463 CQAQAEPNSHRCN--------NGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSP 514
C H C+ G+G G CRC GW+G+ C+ Q C P
Sbjct: 713 CSCDPSWTGHDCSIEICAADCGGHGVCVGGTCRCEDGWMGAACD----------QRACHP 762
Query: 515 REGQPVCSQRGECLCGQCVCHSSDFGKITGKYCECDDF-SCVRYKG--EMCSGHGQCSCG 571
R C++ G C G+C C G++C + V +G +C+G+G+C+
Sbjct: 763 R-----CAEHGTCRDGKCECSPG----WNGEHCTIAHYLDRVVKEGCPGLCNGNGRCTLD 813
Query: 572 ----DCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKC 627
C+C W G C+ + T C S G C C C+QP C
Sbjct: 814 LNGWHCVCQLGWRGAGCDTSMET-ACGDSKDNDGDGLVDCMDPDC-CLQP-----LCHIN 866
Query: 628 PTC 630
P C
Sbjct: 867 PLC 869
>gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo
sapiens]
Length = 870
Score = 78.2 bits (191), Expect = 3e-14
Identities = 84/297 (28%), Positives = 110/297 (37%), Gaps = 48/297 (16%)
Query: 397 NATCLNNEVI--PGLKSCMGLKIGDTVSFSIEAKVRGCPQEKEKSFTIKPVGFKDSLIVQ 454
N+TC NEV PG C G + G P KE + P G +
Sbjct: 83 NSTCSENEVCVRPGECRCRHGYFGANCDTKCPRQFWG-PDCKELC-SCHPHGQCED---- 136
Query: 455 VTFDCDCACQAQAEPNSHRCNNGNGTFE--CGVCRCGPGWLGSQCECSEEDYRPSQQDEC 512
VT C C + H C +GT G CRC PGW G+QC + S C
Sbjct: 137 VTGQCTCHARRWGARCEHACQCQHGTCHPRSGACRCEPGWWGAQCASA---CYCSATSRC 193
Query: 513 SPREGQPVCSQR--GECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQC-- 568
P+ G +C G QC C+SS + +G+ C+C + R G C + QC
Sbjct: 194 DPQTGACLCHAGWWGRSCNNQCACNSSPCEQQSGR-CQCRE----RTFGARCDRYCQCFR 248
Query: 569 -SC----GDCLCDSDWTGYYC-----------NCTTRTDTCMSSNG-LLCSGRG-KCECG 610
C G C C+ + G YC C R C + GR CE G
Sbjct: 249 GRCHPVDGTCACEPGYRGKYCREPCPAGFYGLGCRRRCGQCKGQQPCTVAEGRCLTCEPG 308
Query: 611 --SCVCIQP---GSYGDTC-EKCPTCPDACTFKKECVECKKFDRGALHDENTCNRYC 661
C QP G YG+ C +CP C D +C + + G + D C C
Sbjct: 309 WNGTKCDQPCATGFYGEGCSHRCPPCRDGHACNHVTGKCTRCNAGWIGDR--CETKC 363
Score = 53.9 bits (128), Expect = 6e-07
Identities = 60/218 (27%), Positives = 77/218 (35%), Gaps = 55/218 (25%)
Query: 461 CACQAQ-AEPNSHRCNNGNGTF--------EC---------GVCRCGPGWLGSQCE--CS 500
CAC + E S RC TF +C G C C PG+ G C C
Sbjct: 215 CACNSSPCEQQSGRCQCRERTFGARCDRYCQCFRGRCHPVDGTCACEPGYRGKYCREPCP 274
Query: 501 EEDYRPSQQDECSPREGQPVCS-QRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKG 559
Y + C +GQ C+ G CL C G +CD + G
Sbjct: 275 AGFYGLGCRRRCGQCKGQQPCTVAEGRCL----TCEPGWNGT------KCDQPCATGFYG 324
Query: 560 EMCS--------GHGQCS--CGDCL-CDSDWTGYYCNCTTRTDTCMSSNGLLCS--GRGK 606
E CS GH C+ G C C++ W G C T +C+ G G
Sbjct: 325 EGCSHRCPPCRDGHA-CNHVTGKCTRCNAGWIGDRCETKCSNGTYGEDCAFVCADCGSGH 383
Query: 607 C--ECGSCVCIQPGSYGDTCE-KCP------TCPDACT 635
C + G C+C PG +G C CP C AC+
Sbjct: 384 CDFQSGRCLC-SPGVHGPHCNVTCPPGLHGADCAQACS 420
Score = 31.2 bits (69), Expect = 3.9
Identities = 19/71 (26%), Positives = 25/71 (35%), Gaps = 18/71 (25%)
Query: 474 CNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCV 533
C +G+ F+ G C C PG G C + C P C+Q C
Sbjct: 379 CGSGHCDFQSGRCLCSPGVHGPHCNVT-----------CPPGLHGADCAQ-------ACS 420
Query: 534 CHSSDFGKITG 544
CH +TG
Sbjct: 421 CHEDTCDPVTG 431
>gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo
sapiens]
Length = 865
Score = 78.2 bits (191), Expect = 3e-14
Identities = 84/297 (28%), Positives = 110/297 (37%), Gaps = 48/297 (16%)
Query: 397 NATCLNNEVI--PGLKSCMGLKIGDTVSFSIEAKVRGCPQEKEKSFTIKPVGFKDSLIVQ 454
N+TC NEV PG C G + G P KE + P G +
Sbjct: 83 NSTCSENEVCVRPGECRCRHGYFGANCDTKCPRQFWG-PDCKELC-SCHPHGQCED---- 136
Query: 455 VTFDCDCACQAQAEPNSHRCNNGNGTFE--CGVCRCGPGWLGSQCECSEEDYRPSQQDEC 512
VT C C + H C +GT G CRC PGW G+QC + S C
Sbjct: 137 VTGQCTCHARRWGARCEHACQCQHGTCHPRSGACRCEPGWWGAQCASA---CYCSATSRC 193
Query: 513 SPREGQPVCSQR--GECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQC-- 568
P+ G +C G QC C+SS + +G+ C+C + R G C + QC
Sbjct: 194 DPQTGACLCHAGWWGRSCNNQCACNSSPCEQQSGR-CQCRE----RTFGARCDRYCQCFR 248
Query: 569 -SC----GDCLCDSDWTGYYC-----------NCTTRTDTCMSSNG-LLCSGRG-KCECG 610
C G C C+ + G YC C R C + GR CE G
Sbjct: 249 GRCHPVDGTCACEPGYRGKYCREPCPAGFYGLGCRRRCGQCKGQQPCTVAEGRCLTCEPG 308
Query: 611 --SCVCIQP---GSYGDTC-EKCPTCPDACTFKKECVECKKFDRGALHDENTCNRYC 661
C QP G YG+ C +CP C D +C + + G + D C C
Sbjct: 309 WNGTKCDQPCATGFYGEGCSHRCPPCRDGHACNHVTGKCTRCNAGWIGDR--CETKC 363
Score = 53.9 bits (128), Expect = 6e-07
Identities = 60/218 (27%), Positives = 77/218 (35%), Gaps = 55/218 (25%)
Query: 461 CACQAQ-AEPNSHRCNNGNGTF--------EC---------GVCRCGPGWLGSQCE--CS 500
CAC + E S RC TF +C G C C PG+ G C C
Sbjct: 215 CACNSSPCEQQSGRCQCRERTFGARCDRYCQCFRGRCHPVDGTCACEPGYRGKYCREPCP 274
Query: 501 EEDYRPSQQDECSPREGQPVCS-QRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKG 559
Y + C +GQ C+ G CL C G +CD + G
Sbjct: 275 AGFYGLGCRRRCGQCKGQQPCTVAEGRCL----TCEPGWNGT------KCDQPCATGFYG 324
Query: 560 EMCS--------GHGQCS--CGDCL-CDSDWTGYYCNCTTRTDTCMSSNGLLCS--GRGK 606
E CS GH C+ G C C++ W G C T +C+ G G
Sbjct: 325 EGCSHRCPPCRDGHA-CNHVTGKCTRCNAGWIGDRCETKCSNGTYGEDCAFVCADCGSGH 383
Query: 607 C--ECGSCVCIQPGSYGDTCE-KCP------TCPDACT 635
C + G C+C PG +G C CP C AC+
Sbjct: 384 CDFQSGRCLC-SPGVHGPHCNVTCPPGLHGADCAQACS 420
Score = 31.2 bits (69), Expect = 3.9
Identities = 19/71 (26%), Positives = 25/71 (35%), Gaps = 18/71 (25%)
Query: 474 CNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCV 533
C +G+ F+ G C C PG G C + C P C+Q C
Sbjct: 379 CGSGHCDFQSGRCLCSPGVHGPHCNVT-----------CPPGLHGADCAQ-------ACS 420
Query: 534 CHSSDFGKITG 544
CH +TG
Sbjct: 421 CHEDTCDPVTG 431
>gi|170016091 odz, odd Oz/ten-m homolog 2 [Homo sapiens]
Length = 2765
Score = 76.3 bits (186), Expect = 1e-13
Identities = 51/162 (31%), Positives = 66/162 (40%), Gaps = 33/162 (20%)
Query: 476 NGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPV-CSQRGECLCGQCVC 534
+GNG GVC C PG+LG+ C + PV CS G+ G C C
Sbjct: 581 HGNGECVSGVCHCFPGFLGADCA----------------KAACPVLCSGNGQYSKGTCQC 624
Query: 535 HSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCM 594
+S G C+ C+ C GHG C G+C+C + + G +C D
Sbjct: 625 YSG----WKGAECDVPMNQCI---DPSCGGHGSCIDGNCVCSAGYKGEHCEEVDCLDP-- 675
Query: 595 SSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKCPT-CPDACT 635
CS G C G C+C PG G CE CPD C+
Sbjct: 676 -----TCSSHGVCVNGECLC-SPGWGGLNCELARVQCPDQCS 711
Score = 66.2 bits (160), Expect = 1e-10
Identities = 47/155 (30%), Positives = 58/155 (37%), Gaps = 40/155 (25%)
Query: 476 NGNGTF--ECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCV 533
+G+GT+ + G+C C P W+G C + CS C G C+ G C
Sbjct: 711 SGHGTYLPDTGLCSCDPNWMGPDCSV----------EVCSVD-----CGTHGVCIGGACR 755
Query: 534 CHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTC 593
C G CD C C HG C G C C W G +C D C
Sbjct: 756 CEEGWTG------AACDQRVC----HPRCIEHGTCKDGKCECREGWNGEHCT----IDGC 801
Query: 594 MSSNGLLCSGRGKCECG----SCVCIQPGSYGDTC 624
LC+G G+C G CVC Q G G C
Sbjct: 802 PD----LCNGNGRCTLGQNSWQCVC-QTGWRGPGC 831
Score = 65.1 bits (157), Expect = 2e-10
Identities = 41/125 (32%), Positives = 53/125 (42%), Gaps = 18/125 (14%)
Query: 521 CSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWT 580
C GEC+ G C C G +C +C +CSG+GQ S G C C S W
Sbjct: 580 CHGNGECVSGVCHCFPGFLG------ADCAKAAC----PVLCSGNGQYSKGTCQCYSGWK 629
Query: 581 GYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKEC 640
G C + C+ + C G G C G+CVC G G+ CE+ C+ C
Sbjct: 630 G--AECDVPMNQCIDPS---CGGHGSCIDGNCVC-SAGYKGEHCEEVDCLDPTCSSHGVC 683
Query: 641 V--EC 643
V EC
Sbjct: 684 VNGEC 688
>gi|122937343 platelet endothelial aggregation receptor 1 [Homo
sapiens]
Length = 1037
Score = 73.2 bits (178), Expect = 9e-13
Identities = 67/261 (25%), Positives = 94/261 (36%), Gaps = 71/261 (27%)
Query: 459 CDCACQAQAE----PNSHRCNNGNGTFEC--GVCRCGPGWLGSQCE--CSEEDYRPSQQD 510
CD +C P++H C NG G F+ G C C PGW+G+ C C E + P+
Sbjct: 216 CDVSCSQGTSGFFCPSTHSCQNG-GVFQTPQGSCSCPPGWMGTICSLPCPEGFHGPNCSQ 274
Query: 511 ECSPREGQPVCSQRGECLCG------QC--VCHSSDFGKITGKYCEC-DDFSCVRYKGEM 561
EC G G+C C +C C FG+ + C+C D C G
Sbjct: 275 ECRCHNGGLCDRFTGQCRCAPGYTGDRCREECPVGRFGQDCAETCDCAPDARCFPANGAC 334
Query: 562 CSGHG----------------------QCSC------------GDCLCDSDWTGYYCNCT 587
HG C+C G+C C W G +CN +
Sbjct: 335 LCEHGFTGDRCTDRLCPDGFYGLSCQAPCTCDREHSLSCHPMNGECSCLPGWAGLHCNES 394
Query: 588 TRTDT--------CMSSNGLLCSG-RGKCECG------SCVCI-QPGSYGDTCEKCPTCP 631
DT C+ +G +C G C+C C + P +YG C +C
Sbjct: 395 CPQDTHGPGCQEHCLCLHGGVCQATSGLCQCAPGYTGPHCASLCPPDTYGVNCSARCSCE 454
Query: 632 DACT---FKKECVECKKFDRG 649
+A ECV + + RG
Sbjct: 455 NAIACSPIDGECVCKEGWQRG 475
Score = 59.7 bits (143), Expect = 1e-08
Identities = 55/209 (26%), Positives = 71/209 (33%), Gaps = 69/209 (33%)
Query: 459 CDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQ 518
C CA +A P + G C C PGW G+ C
Sbjct: 494 CQCAHEAVCSPQT------------GACTCTPGWHGAHC--------------------- 520
Query: 519 PVCSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSG-HGQCSCGDCLCDS 577
Q C FG+ C+CD + C HG+C C +
Sbjct: 521 ------------QLPCPKGQFGEGCASRCDCD-------HSDGCDPVHGRCQ-----CQA 556
Query: 578 DWTGYYC--NCTTRTDTCMSSNGLLCSGRGKC--ECGSCVCIQPGSYGDTCEKCPTCPDA 633
W G C +C SN C G C E G+CVC PG G +C++ +C
Sbjct: 557 GWMGARCHLSCPEGLWGVNCSNTCTCKNGGTCLPENGNCVC-APGFRGPSCQR--SCQPG 613
Query: 634 CTFKKECVECKKFDRGALHDEN-TCNRYC 661
+ K CV CK + H N TC YC
Sbjct: 614 -RYGKRCVPCKCANHSFCHPSNGTC--YC 639
Score = 53.5 bits (127), Expect = 7e-07
Identities = 53/209 (25%), Positives = 66/209 (31%), Gaps = 69/209 (33%)
Query: 486 CRCGPGWLGSQC--ECSEEDYRPSQQDECSPREGQPVCSQRGECLCG------------- 530
C+C PGW G C EC+ + P CS + G C C
Sbjct: 120 CQCVPGWRGDDCSSECAPGMWGPQCDKPCSCGNNSSCDPKSGVCSCPSGLQPPNCLQPCT 179
Query: 531 ----------QCVCHSSDFGKITGK-YCECD------DFSCVR-YKGEMCSGHGQCS--- 569
+C CH + TG +C + D SC + G C C
Sbjct: 180 PGYYGPACQFRCQCHGAPCDPQTGACFCPAERTGPSCDVSCSQGTSGFFCPSTHSCQNGG 239
Query: 570 -----CGDCLCDSDWTGYYC-----------NCTTRTDTCMSSNGLLCSG-RGKCECGSC 612
G C C W G C NC + C NG LC G+C C
Sbjct: 240 VFQTPQGSCSCPPGWMGTICSLPCPEGFHGPNC---SQECRCHNGGLCDRFTGQCRCA-- 294
Query: 613 VCIQPGSYGDTC-EKCPT------CPDAC 634
PG GD C E+CP C + C
Sbjct: 295 ----PGYTGDRCREECPVGRFGQDCAETC 319
>gi|110347400 odz, odd Oz/ten-m homolog 1 isoform 3 [Homo sapiens]
Length = 2725
Score = 72.8 bits (177), Expect = 1e-12
Identities = 53/183 (28%), Positives = 67/183 (36%), Gaps = 46/183 (25%)
Query: 458 DCDCA-------CQAQAEPNSHRCNNGNGTF--ECGVCRCGPGWLGSQCE---CSEEDYR 505
+C C+ C+ +C+ G+GTF + GVC C P W GS C C+ E
Sbjct: 643 ECHCSTGWGGVNCETPLPVCQEQCS-GHGTFLLDAGVCSCDPKWTGSDCSTELCTME--- 698
Query: 506 PSQQDECSPREGQPVCSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGH 565
C G C G C C G C++ SC + C+ H
Sbjct: 699 ---------------CGSHGVCSRGICQCEEGWVGPT------CEERSCHSH----CTEH 733
Query: 566 GQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGS----CVCIQPGSYG 621
GQC G C C W G +C D LC G G+C CVC Q G G
Sbjct: 734 GQCKDGKCECSPGWEGDHCTIAHYLDAVRDGCPGLCFGNGRCTLDQNGWHCVC-QVGWSG 792
Query: 622 DTC 624
C
Sbjct: 793 TGC 795
Score = 70.9 bits (172), Expect = 4e-12
Identities = 52/184 (28%), Positives = 68/184 (36%), Gaps = 43/184 (23%)
Query: 453 VQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDEC 512
+++ DC C NGNG G C C PG+LG C +D C
Sbjct: 526 IEIMDDCSTNC------------NGNGECISGHCHCFPGFLGPDCA----------RDSC 563
Query: 513 SPREGQPVCSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGD 572
+C GE G CVC G C+ + C+ C GHG C G
Sbjct: 564 PV-----LCGGNGEYEKGHCVCRHG----WKGPECDVPEEQCI---DPTCFGHGTCIMGV 611
Query: 573 CLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCE-KCPTCP 631
C+C + G C + C+ +CS G C G C C G G CE P C
Sbjct: 612 CICVPGYKGEIC----EEEDCLDP---MCSNHGICVKGECHC-STGWGGVNCETPLPVCQ 663
Query: 632 DACT 635
+ C+
Sbjct: 664 EQCS 667
>gi|253970446 odz, odd Oz/ten-m homolog 1 isoform 2 [Homo sapiens]
Length = 2731
Score = 72.8 bits (177), Expect = 1e-12
Identities = 53/183 (28%), Positives = 67/183 (36%), Gaps = 46/183 (25%)
Query: 458 DCDCA-------CQAQAEPNSHRCNNGNGTF--ECGVCRCGPGWLGSQCE---CSEEDYR 505
+C C+ C+ +C+ G+GTF + GVC C P W GS C C+ E
Sbjct: 642 ECHCSTGWGGVNCETPLPVCQEQCS-GHGTFLLDAGVCSCDPKWTGSDCSTELCTME--- 697
Query: 506 PSQQDECSPREGQPVCSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGH 565
C G C G C C G C++ SC + C+ H
Sbjct: 698 ---------------CGSHGVCSRGICQCEEGWVGPT------CEERSCHSH----CTEH 732
Query: 566 GQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGS----CVCIQPGSYG 621
GQC G C C W G +C D LC G G+C CVC Q G G
Sbjct: 733 GQCKDGKCECSPGWEGDHCTIAHYLDAVRDGCPGLCFGNGRCTLDQNGWHCVC-QVGWSG 791
Query: 622 DTC 624
C
Sbjct: 792 TGC 794
Score = 70.9 bits (172), Expect = 4e-12
Identities = 52/184 (28%), Positives = 68/184 (36%), Gaps = 43/184 (23%)
Query: 453 VQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDEC 512
+++ DC C NGNG G C C PG+LG C +D C
Sbjct: 525 IEIMDDCSTNC------------NGNGECISGHCHCFPGFLGPDCA----------RDSC 562
Query: 513 SPREGQPVCSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGD 572
+C GE G CVC G C+ + C+ C GHG C G
Sbjct: 563 PV-----LCGGNGEYEKGHCVCRHG----WKGPECDVPEEQCI---DPTCFGHGTCIMGV 610
Query: 573 CLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCE-KCPTCP 631
C+C + G C + C+ +CS G C G C C G G CE P C
Sbjct: 611 CICVPGYKGEIC----EEEDCLDP---MCSNHGICVKGECHC-STGWGGVNCETPLPVCQ 662
Query: 632 DACT 635
+ C+
Sbjct: 663 EQCS 666
>gi|253970444 odz, odd Oz/ten-m homolog 1 isoform 1 [Homo sapiens]
Length = 2732
Score = 72.8 bits (177), Expect = 1e-12
Identities = 53/183 (28%), Positives = 67/183 (36%), Gaps = 46/183 (25%)
Query: 458 DCDCA-------CQAQAEPNSHRCNNGNGTF--ECGVCRCGPGWLGSQCE---CSEEDYR 505
+C C+ C+ +C+ G+GTF + GVC C P W GS C C+ E
Sbjct: 643 ECHCSTGWGGVNCETPLPVCQEQCS-GHGTFLLDAGVCSCDPKWTGSDCSTELCTME--- 698
Query: 506 PSQQDECSPREGQPVCSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGH 565
C G C G C C G C++ SC + C+ H
Sbjct: 699 ---------------CGSHGVCSRGICQCEEGWVGPT------CEERSCHSH----CTEH 733
Query: 566 GQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGS----CVCIQPGSYG 621
GQC G C C W G +C D LC G G+C CVC Q G G
Sbjct: 734 GQCKDGKCECSPGWEGDHCTIAHYLDAVRDGCPGLCFGNGRCTLDQNGWHCVC-QVGWSG 792
Query: 622 DTC 624
C
Sbjct: 793 TGC 795
Score = 70.9 bits (172), Expect = 4e-12
Identities = 52/184 (28%), Positives = 68/184 (36%), Gaps = 43/184 (23%)
Query: 453 VQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDEC 512
+++ DC C NGNG G C C PG+LG C +D C
Sbjct: 526 IEIMDDCSTNC------------NGNGECISGHCHCFPGFLGPDCA----------RDSC 563
Query: 513 SPREGQPVCSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGD 572
+C GE G CVC G C+ + C+ C GHG C G
Sbjct: 564 PV-----LCGGNGEYEKGHCVCRHG----WKGPECDVPEEQCI---DPTCFGHGTCIMGV 611
Query: 573 CLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCE-KCPTCP 631
C+C + G C + C+ +CS G C G C C G G CE P C
Sbjct: 612 CICVPGYKGEIC----EEEDCLDP---MCSNHGICVKGECHC-STGWGGVNCETPLPVCQ 663
Query: 632 DACT 635
+ C+
Sbjct: 664 EQCS 667
>gi|122937400 odz, odd Oz/ten-m homolog 3 [Homo sapiens]
Length = 2699
Score = 70.1 bits (170), Expect = 8e-12
Identities = 43/125 (34%), Positives = 54/125 (43%), Gaps = 18/125 (14%)
Query: 521 CSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWT 580
C GEC+ G C C G +C +C +CSG+GQ S G CLC S W
Sbjct: 522 CHGNGECVSGTCHCFPGFLGP------DCSRAACP----VLCSGNGQYSKGRCLCFSGWK 571
Query: 581 GYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKEC 640
G C T C+ C GRG C GSC C G G++CE+ C+ C
Sbjct: 572 G--TECDVPTTQCIDPQ---CGGRGICIMGSCAC-NSGYKGESCEEADCIDPGCSNHGVC 625
Query: 641 V--EC 643
+ EC
Sbjct: 626 IHGEC 630
Score = 68.2 bits (165), Expect = 3e-11
Identities = 62/259 (23%), Positives = 86/259 (33%), Gaps = 80/259 (30%)
Query: 449 DSLIVQVTFDCDCACQAQAEPNSHRCN-------------------NGNGTFECGVCRCG 489
++++++ +C C E S C+ +GNG + G C C
Sbjct: 508 NTIVIESVVECPRNCHGNGECVSGTCHCFPGFLGPDCSRAACPVLCSGNGQYSKGRCLCF 567
Query: 490 PGWLGSQCECSEEDYRPSQ--------QDECSPREG------------QPVCSQRGECLC 529
GW G++C+ Q C+ G P CS G C+
Sbjct: 568 SGWKGTECDVPTTQCIDPQCGGRGICIMGSCACNSGYKGESCEEADCIDPGCSNHGVCIH 627
Query: 530 GQCVCHSSDFGKIT--------------GKY------CECD-DFSCVRYKGEMCS----G 564
G+C C G G Y C CD +++ E+CS
Sbjct: 628 GECHCSPGWGGSNCEILKTMCPDQCSGHGTYLQESGSCTCDPNWTGPDCSNEICSVDCGS 687
Query: 565 HGQCSCGDCLCDSDWTGYYCN---CTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYG 621
HG C G C C+ WTG CN C R C+ G C+ G C C Q G G
Sbjct: 688 HGVCMGGTCRCEEGWTGPACNQRACHPR-----------CAEHGTCKDGKCECSQ-GWNG 735
Query: 622 DTCEKCPTCPDACTFKKEC 640
+ C CP C C
Sbjct: 736 EHC-TIEGCPGLCNSNGRC 753
Score = 55.1 bits (131), Expect = 3e-07
Identities = 44/181 (24%), Positives = 66/181 (36%), Gaps = 47/181 (25%)
Query: 476 NGNGTF--ECGVCRCGPGW--------------------LGSQCECSEEDYRPSQQDECS 513
+G+GT+ E G C C P W +G C C E P+ C+
Sbjct: 653 SGHGTYLQESGSCTCDPNWTGPDCSNEICSVDCGSHGVCMGGTCRCEEGWTGPA----CN 708
Query: 514 PREGQPVCSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGD- 572
R P C++ G C G+C C G++C + +C+ +G+C+
Sbjct: 709 QRACHPRCAEHGTCKDGKCECSQG----WNGEHCTIEGCP------GLCNSNGRCTLDQN 758
Query: 573 ---CLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKCPT 629
C+C W G C+ T C S G C C C+Q +C+ P
Sbjct: 759 GWHCVCQPGWRGAGCDVAMET-LCTDSKDNEGDGLIDCMDPDC-CLQ-----SSCQNQPY 811
Query: 630 C 630
C
Sbjct: 812 C 812
>gi|33598931 scavenger receptor class F, member 1 isoform 3
precursor [Homo sapiens]
Length = 569
Score = 69.7 bits (169), Expect = 1e-11
Identities = 78/306 (25%), Positives = 105/306 (34%), Gaps = 85/306 (27%)
Query: 462 ACQAQAEPNSHRCN-------NGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSP 514
ACQ QA+ RC +G GVC C PGW S C RP Q + +
Sbjct: 117 ACQCQADRWGARCEFPCACGPHGRCDPATGVCHCEPGWWSSTCR------RPCQCNTAAA 170
Query: 515 REGQPVCSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHG-------- 566
R C Q G CVC +G+ C C C + G G
Sbjct: 171 R-----CEQ----ATGACVCKPGWWGRRCSFRCNCHGSPCEQDSGRCACRPGWWGPECQQ 221
Query: 567 QCSC---------GDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCS-GRGKCE-------- 608
QC C G+C C + G C S+G+ C+ G+C+
Sbjct: 222 QCECVRGRCSAASGECTCPPGFRGARCELPCPA----GSHGVQCAHSCGRCKHNEPCSPD 277
Query: 609 ---CGSC-------VCIQ---PGSYGDTCE-KCPTCPDACTFKKECVECKKFDRGALHDE 654
C SC C Q PG++G++CE +CP C + + C++ D G L
Sbjct: 278 TGSCESCEPGWNGTQCQQPCLPGTFGESCEQQCPHCRHGEACEPDTGHCQRCDPGWLGPR 337
Query: 655 NTCNRYCRDEIESVKELKDTGKDAVNCTYKNED----DCVVRFQYYEDSSGKSILYVVEE 710
C D + +D G C + D DCV Y+ S S
Sbjct: 338 ------CEDPCPTGTFGEDCGSTCPTCVQGSCDTVTGDCVCSAGYWGPSCNAS------- 384
Query: 711 PECPKG 716
CP G
Sbjct: 385 --CPAG 388
Score = 62.0 bits (149), Expect = 2e-09
Identities = 55/221 (24%), Positives = 80/221 (36%), Gaps = 51/221 (23%)
Query: 458 DCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQC--ECSEEDYRPSQQDECSPR 515
D +C P++ C + G+CRC PG+ G+ C C + + P ++ C
Sbjct: 49 DQECTIPICEGPDA--CQKDEVCVKPGLCRCKPGFFGAHCSSRCPGQYWGPDCRESCP-- 104
Query: 516 EGQPVCSQRGEC--LCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQC--SCG 571
C G+C G C C + +G C +F C C HG+C + G
Sbjct: 105 -----CHPHGQCEPATGACQCQADRWG------ARC-EFPCA------CGPHGRCDPATG 146
Query: 572 DCLCDSDWTGYY----CNCTTRTDTCMSSNGLL----------CSGRGKC-------ECG 610
C C+ W C C T C + G CS R C + G
Sbjct: 147 VCHCEPGWWSSTCRRPCQCNTAAARCEQATGACVCKPGWWGRRCSFRCNCHGSPCEQDSG 206
Query: 611 SCVCIQPGSYGDTC-EKCPTCPDACTFKKECVECKKFDRGA 650
C C +PG +G C ++C C+ C RGA
Sbjct: 207 RCAC-RPGWWGPECQQQCECVRGRCSAASGECTCPPGFRGA 246
Score = 40.8 bits (94), Expect = 0.005
Identities = 34/114 (29%), Positives = 43/114 (37%), Gaps = 21/114 (18%)
Query: 468 EPNSHRCNNGNGTF-ECGVC-RCGPGWLGSQCE--CSEEDYRPSQQDECSPREGQPVCSQ 523
E C +G + G C RC PGWLG +CE C + C P C Q
Sbjct: 307 EQQCPHCRHGEACEPDTGHCQRCDPGWLGPRCEDPCPTGTFGEDCGSTC------PTCVQ 360
Query: 524 RGEC--LCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLC 575
G C + G CVC + +G C + G CS C C + LC
Sbjct: 361 -GSCDTVTGDCVCSAGYWGPSCNASCPAG------FHGNNCS--VPCECPEGLC 405
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,471,398
Number of Sequences: 37866
Number of extensions: 1704922
Number of successful extensions: 6850
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 276
Number of HSP's that attempted gapping in prelim test: 4503
Number of HSP's gapped (non-prelim): 1349
length of query: 788
length of database: 18,247,518
effective HSP length: 110
effective length of query: 678
effective length of database: 14,082,258
effective search space: 9547770924
effective search space used: 9547770924
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.