CCDC85B 30133

Name: CCDC85B	Sequence: fasta or formatted (202aa)		NCBI GI: 46094079
Description: hepatitis delta antigen-interacting protein A		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.4 21 2 C cysteine 3.0 6 2 D aspartate 4.5 9 2 E glutamate 12.9 26 2 F phenylalanine 1.0 2 1 G glycine 12.4 25 2 H histidine 0.5 1 1 I isoleucine 0.5 1 1 K lysine 2.0 4 1 L leucine 15.8 32 2 M methionine 1.5 3 1 N asparagine 2.0 4 1 P proline 5.0 10 2 Q glutamine 6.4 13 1 R arginine 11.9 24 2 S serine 5.0 10 3 T threonine 1.5 3 1 V valine 2.5 5 1 W tryptophan 1.5 3 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hepatitis delta antigen-interacting protein A CCDC85C 0.406 coiled-coil domain containing 85C CCDC85A 0.366 coiled-coil domain containing 85A SLC27A3 0.047 solute carrier family 27 member 3 CCDC88B 0.042 coiled-coil domain containing 88 MEX3A 0.039 MEX3A protein TCHH 0.037 trichohyalin CROCC 0.037 ciliary rootlet coiled-coil TFPT 0.034 TCF3 (E2A) fusion partner CCDC88C 0.034 DVL-binding protein DAPLE KHSRP 0.031 KH-type splicing regulatory protein LOC100133220 0.031 PREDICTED: hypothetical protein TCHP 0.031 trichoplein TCHP 0.031 trichoplein C16orf11 0.031 hypothetical protein LOC146325 AZI1 0.031 5-azacytidine induced 1 isoform b AZI1 0.031 5-azacytidine induced 1 isoform a MYH14 0.029 myosin, heavy chain 14 isoform 1 MYH14 0.029 myosin, heavy chain 14 isoform 2 MYH14 0.029 myosin, heavy chain 14 isoform 3 GOLGA3 0.029 Golgi autoantigen, golgin subfamily a, 3 MYH9 0.029 myosin, heavy polypeptide 9, non-muscle CEP250 0.029 centrosomal protein 2 LOC100130174 0.029 PREDICTED: hypothetical protein LOC100130174 0.029 PREDICTED: hypothetical protein LOC100130174 0.029 PREDICTED: hypothetical protein PLEC1 0.029 plectin 1 isoform 11 PLEC1 0.029 plectin 1 isoform 10 PLEC1 0.029 plectin 1 isoform 8 PLEC1 0.029 plectin 1 isoform 7 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.