C16orf11 13561

Name: C16orf11	Sequence: fasta or formatted (571aa)		NCBI GI: 21687188
Description: hypothetical protein LOC146325		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.8 56 4 C cysteine 2.1 12 1 D aspartate 3.5 20 2 E glutamate 4.7 27 1 F phenylalanine 1.4 8 1 G glycine 11.9 68 3 H histidine 2.3 13 1 I isoleucine 0.9 5 1 K lysine 3.5 20 2 L leucine 10.9 62 3 M methionine 1.1 6 1 N asparagine 0.5 3 1 P proline 17.7 101 4 Q glutamine 3.2 18 1 R arginine 6.8 39 3 S serine 8.1 46 2 T threonine 4.2 24 2 V valine 4.4 25 2 W tryptophan 1.2 7 1 Y tyrosine 1.9 11 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC146325 ZNF750 0.067 zinc finger protein 750 NACA 0.042 nascent polypeptide-associated complex alpha subuni... TAF4 0.042 TBP-associated factor 4 FLJ22184 0.037 PREDICTED: hypothetical protein FLJ22184 COL5A1 0.036 alpha 1 type V collagen preproprotein COL28A1 0.035 collagen, type XXVIII precursor COL1A1 0.034 alpha 1 type I collagen preproprotein COL11A1 0.034 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.034 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.034 alpha 1 type XI collagen isoform A preproprotein [Ho... COL7A1 0.031 alpha 1 type VII collagen precursor PRB1 0.031 proline-rich protein BstNI subfamily 1 isoform 1 pre... FLJ22184 0.031 PREDICTED: hypothetical protein FLJ22184 COL4A5 0.031 type IV collagen alpha 5 isoform 1 precursor COL17A1 0.031 alpha 1 type XVII collagen LMTK3 0.031 lemur tyrosine kinase 3 COL10A1 0.030 type X collagen alpha 1 precursor KIAA1522 0.030 hypothetical protein LOC57648 COL5A2 0.030 alpha 2 type V collagen preproprotein FLJ22184 0.030 PREDICTED: hypothetical protein LOC80164 COL4A5 0.029 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.029 type IV collagen alpha 5 isoform 3 precursor PRB2 0.029 proline-rich protein BstNI subfamily 2 COL3A1 0.029 collagen type III alpha 1 preproprotein WIPF3 0.029 WAS/WASL interacting protein family, member 3 [Homo... COL4A3 0.029 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.029 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.029 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.029 alpha 3 type IV collagen isoform 1 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.