QKI 30071

Name: QKI	Sequence: fasta or formatted (341aa)		NCBI GI: 45827706
Description: quaking homolog, KH domain RNA binding isoform HQK-5		Referenced in: Oligodendrocytes and Myelin Capping and Splicing
Other entries for this name: alt prot [319aa] quaking homolog, KH domain RNA binding isoform HQK-6 alt prot [325aa] quaking homolog, KH domain RNA binding isoform HQK-7 alt prot [319aa] quaking homolog, KH domain RNA binding isoform HQK-7B
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.7 33 2 C cysteine 0.6 2 1 D aspartate 4.1 14 1 E glutamate 7.9 27 2 F phenylalanine 1.5 5 1 G glycine 6.2 21 1 H histidine 1.8 6 1 I isoleucine 5.6 19 2 K lysine 7.0 24 3 L leucine 9.7 33 2 M methionine 3.8 13 1 N asparagine 4.1 14 1 P proline 9.7 33 2 Q glutamine 3.2 11 1 R arginine 5.9 20 2 S serine 3.2 11 2 T threonine 6.5 22 1 V valine 6.2 21 1 W tryptophan 0.3 1 1 Y tyrosine 3.2 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 quaking homolog, KH domain RNA binding isoform HQK-5... QKI 0.912 quaking homolog, KH domain RNA binding isoform HQK-7... QKI 0.912 quaking homolog, KH domain RNA binding isoform HQK-6... QKI 0.909 quaking homolog, KH domain RNA binding isoform HQK-7... KHDRBS2 0.176 KH domain-containing, RNA-binding, signal transduct... KHDRBS3 0.170 KH domain containing, RNA binding, signal transductio... KHDRBS1 0.166 KH domain containing, RNA binding, signal transductio... SF1 0.114 splicing factor 1 isoform 3 SF1 0.114 splicing factor 1 isoform 2 SF1 0.114 splicing factor 1 isoform 1 KIAA0907 0.029 hypothetical protein LOC22889 GLTSCR1 0.021 glioma tumor suppressor candidate region gene 1 [Ho... NFIB 0.021 nuclear factor I/B MAPK7 0.021 mitogen-activated protein kinase 7 isoform 1 MAPK7 0.021 mitogen-activated protein kinase 7 isoform 1 MAPK7 0.021 mitogen-activated protein kinase 7 isoform 1 MAPK7 0.021 mitogen-activated protein kinase 7 isoform 2 SFPQ 0.020 splicing factor proline/glutamine rich (polypyrimidin... TCERG1 0.020 transcription elongation regulator 1 isoform 2 [Homo... TCERG1 0.020 transcription elongation regulator 1 isoform 1 [Homo... RIN3 0.018 Ras and Rab interactor 3 BPTF 0.018 bromodomain PHD finger transcription factor isoform ... BPTF 0.018 bromodomain PHD finger transcription factor isoform ... NACA 0.018 nascent polypeptide-associated complex alpha subuni... AMOT 0.017 angiomotin isoform 2 AMOT 0.017 angiomotin isoform 1 NUMBL 0.017 numb homolog (Drosophila)-like BCORL1 0.017 BCL6 co-repressor-like 1 FMN2 0.015 formin 2 IRX5 0.015 iroquois homeobox protein 5 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.