| Name: PSPC1 | Sequence: fasta or formatted (523aa) | NCBI GI: 109240550 | |
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Description: paraspeckle protein 1
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Referenced in:
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 8.6 45 5 C cysteine 0.4 2 1 D aspartate 3.8 20 2 E glutamate 11.5 60 3 F phenylalanine 4.4 23 1 G glycine 9.4 49 2 H histidine 1.7 9 1 I isoleucine 2.9 15 1 K lysine 4.6 24 1 L leucine 6.7 35 2 M methionine 5.5 29 2 N asparagine 3.8 20 2 P proline 9.2 48 3 Q glutamine 5.5 29 2 R arginine 9.9 52 3 S serine 3.4 18 1 T threonine 3.6 19 3 V valine 3.6 19 4 W tryptophan 0.2 1 1 Y tyrosine 1.1 6 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 paraspeckle protein 1 NONO 0.498 non-POU domain containing, octamer-binding isoform ... NONO 0.498 non-POU domain containing, octamer-binding isoform ... NONO 0.498 non-POU domain containing, octamer-binding isoform 1... SFPQ 0.493 splicing factor proline/glutamine rich (polypyrimidin... NONO 0.432 non-POU domain containing, octamer-binding isoform ... TCHH 0.046 trichohyalin RAVER1 0.042 RAVER1 LOC100133758 0.041 PREDICTED: hypothetical protein, partial ELAVL4 0.039 ELAV-like 4 isoform 1 LOC645202 0.039 PREDICTED: hypothetical protein LOC645202 ELAVL4 0.039 ELAV-like 4 isoform 5 ELAVL4 0.039 ELAV-like 4 isoform 4 ELAVL4 0.039 ELAV-like 4 isoform 3 ELAVL4 0.039 ELAV-like 4 isoform 2 ENAH 0.039 enabled homolog isoform a ENAH 0.039 enabled homolog isoform b MAP4K4 0.038 mitogen-activated protein kinase kinase kinase kinas... PABPC5 0.038 poly(A) binding protein, cytoplasmic 5 LOC283685 0.038 PREDICTED: golgi autoantigen, golgin subfamily a-li... RBM4B 0.038 RNA binding motif protein 4B LOC283767 0.038 golgi autoantigen, golgin subfamily a-like RBM4 0.038 RNA binding motif protein 4 LOC283685 0.037 PREDICTED: golgi autoantigen, golgin subfamily a-li... SAFB2 0.037 scaffold attachment factor B2 MAP4K4 0.036 mitogen-activated protein kinase kinase kinase kinas... ELAVL3 0.036 ELAV-like protein 3 isoform 1 ELAVL3 0.036 ELAV-like protein 3 isoform 2 ELAVL2 0.036 ELAV (embryonic lethal, abnormal vision, Drosophila... PABPC4 0.036 poly A binding protein, cytoplasmic 4 isoform 3 [Ho...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
