Guide to the Human Genome
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Name: SLC6A2 Sequence: fasta or formatted (617aa) NCBI GI: 4557046
Description:

solute carrier family 6 member 2

Referenced in:

Catecholamines
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         48           2
 C cysteine            1.6         10           1
 D aspartate           3.6         22           2
 E glutamate           3.2         20           1
 F phenylalanine       7.6         47           2
 G glycine             8.1         50           3
 H histidine           2.1         13           2
 I isoleucine          6.5         40           2
 K lysine              3.7         23           2
 L leucine            12.6         78           3
 M methionine          2.1         13           2
 N asparagine          3.9         24           2
 P proline             4.1         25           2
 Q glutamine           2.8         17           2
 R arginine            3.1         19           1
 S serine              5.5         34           2
 T threonine           5.3         33           1
 V valine              8.4         52           4
 W tryptophan          3.1         19           1
 Y tyrosine            4.9         30           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 6 member 2 
SLC6A3                0.664   solute carrier family 6 (neurotransmitter transporter...
SLC6A4                0.481   solute carrier family 6 member 4 
SLC6A12               0.407   solute carrier family 6 (neurotransmitter transport...
SLC6A12               0.407   solute carrier family 6 (neurotransmitter transport...
SLC6A12               0.407   solute carrier family 6 (neurotransmitter transport...
SLC6A1                0.406   solute carrier family 6 (neurotransmitter transport...
SLC6A5                0.401   solute carrier family 6 (neurotransmitter transporte...
SLC6A6                0.396   solute carrier family 6 (neurotransmitter transport...
SLC6A6                0.396   solute carrier family 6 (neurotransmitter transporte...
SLC6A8                0.395   solute carrier family 6 member 8 isoform 1 
SLC6A13               0.394   solute carrier family 6 (neurotransmitter transporte...
SLC6A11               0.393   solute carrier family 6 (neurotransmitter transporter...
SLC6A7                0.393   solute carrier family 6, member 7 
SLC6A8                0.382   solute carrier family 6 member 8 isoform 2 
SLC6A14               0.369   solute carrier family 6 (amino acid transporter), mem...
SLC6A9                0.367   solute carrier family 6 member 9 isoform 1 
SLC6A9                0.366   solute carrier family 6 member 9 isoform 2 
SLC6A9                0.366   solute carrier family 6 member 9 isoform 3 
SLC6A8                0.313   solute carrier family 6 member 8 isoform 3 
SLC6A18               0.265   solute carrier family 6, member 18 
SLC6A15               0.265   solute carrier family 6, member 15 isoform 1 
SLC6A19               0.265   solute carrier family 6, member 19 
SLC6A20               0.250   solute carrier family 6, member 20 isoform 1 
SLC6A15               0.212   solute carrier family 6, member 15 isoform 3 
SLC6A20               0.211   solute carrier family 6, member 20 isoform 2 
SLC6A17               0.202   solute carrier family 6, member 17 
SLC6A16               0.169   solute carrier family 6, member 16 
SLC6A6                0.130   solute carrier family 6 (neurotransmitter transport...
SLC6A15               0.114   solute carrier family 6, member 15 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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