Guide to the Human Genome
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Name: SLC6A18 Sequence: fasta or formatted (628aa) NCBI GI: 194018524
Description:

solute carrier family 6, member 18

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         52           2
 C cysteine            2.5         16           1
 D aspartate           5.3         33           2
 E glutamate           2.7         17           2
 F phenylalanine       5.9         37           2
 G glycine             6.1         38           3
 H histidine           1.3          8           1
 I isoleucine          5.3         33           2
 K lysine              2.5         16           1
 L leucine            13.4         84           3
 M methionine          2.4         15           1
 N asparagine          3.2         20           1
 P proline             6.5         41           2
 Q glutamine           2.4         15           1
 R arginine            5.4         34           4
 S serine              5.6         35           2
 T threonine           6.1         38           2
 V valine              7.5         47           2
 W tryptophan          3.7         23           2
 Y tyrosine            4.1         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 6, member 18 
SLC6A19               0.523   solute carrier family 6, member 19 
SLC6A20               0.452   solute carrier family 6, member 20 isoform 1 
SLC6A20               0.397   solute carrier family 6, member 20 isoform 2 
SLC6A15               0.384   solute carrier family 6, member 15 isoform 1 
SLC6A17               0.372   solute carrier family 6, member 17 
SLC6A15               0.324   solute carrier family 6, member 15 isoform 3 
SLC6A5                0.285   solute carrier family 6 (neurotransmitter transporte...
SLC6A1                0.281   solute carrier family 6 (neurotransmitter transport...
SLC6A8                0.280   solute carrier family 6 member 8 isoform 1 
SLC6A7                0.279   solute carrier family 6, member 7 
SLC6A14               0.272   solute carrier family 6 (amino acid transporter), mem...
SLC6A12               0.271   solute carrier family 6 (neurotransmitter transport...
SLC6A12               0.271   solute carrier family 6 (neurotransmitter transport...
SLC6A12               0.271   solute carrier family 6 (neurotransmitter transport...
SLC6A9                0.266   solute carrier family 6 member 9 isoform 3 
SLC6A9                0.266   solute carrier family 6 member 9 isoform 2 
SLC6A9                0.266   solute carrier family 6 member 9 isoform 1 
SLC6A13               0.263   solute carrier family 6 (neurotransmitter transporte...
SLC6A8                0.263   solute carrier family 6 member 8 isoform 2 
SLC6A4                0.260   solute carrier family 6 member 4 
SLC6A2                0.257   solute carrier family 6 member 2 
SLC6A6                0.256   solute carrier family 6 (neurotransmitter transport...
SLC6A6                0.256   solute carrier family 6 (neurotransmitter transporte...
SLC6A3                0.255   solute carrier family 6 (neurotransmitter transporter...
SLC6A11               0.246   solute carrier family 6 (neurotransmitter transporter...
SLC6A16               0.236   solute carrier family 6, member 16 
SLC6A8                0.215   solute carrier family 6 member 8 isoform 3 
SLC6A15               0.170   solute carrier family 6, member 15 isoform 2 
SLC6A6                0.088   solute carrier family 6 (neurotransmitter transport...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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