SPG7 29498

Name: SPG7	Sequence: fasta or formatted (795aa)		NCBI GI: 4507173
Description: spastic paraplegia 7 isoform 1		Referenced in: Metalloproteases Mitochondria Overview of the Proteases
Other entries for this name: alt prot [489aa] spastic paraplegia 7 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.4 75 2 C cysteine 0.5 4 1 D aspartate 3.9 31 2 E glutamate 8.3 66 3 F phenylalanine 4.2 33 2 G glycine 8.8 70 2 H histidine 2.1 17 1 I isoleucine 3.6 29 1 K lysine 5.7 45 2 L leucine 11.3 90 5 M methionine 3.5 28 2 N asparagine 2.6 21 1 P proline 5.5 44 3 Q glutamine 4.5 36 2 R arginine 7.3 58 4 S serine 4.7 37 2 T threonine 4.5 36 2 V valine 6.5 52 2 W tryptophan 1.0 8 1 Y tyrosine 1.9 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 spastic paraplegia 7 isoform 1 SPG7 0.549 spastic paraplegia 7 isoform 2 AFG3L2 0.320 AFG3 ATPase family gene 3-like 2 YME1L1 0.185 YME1-like 1 isoform 1 YME1L1 0.185 YME1-like 1 isoform 3 VCP 0.106 valosin-containing protein PSMC5 0.104 proteasome 26S ATPase subunit 5 PSMC2 0.101 proteasome 26S ATPase subunit 2 PSMC6 0.101 proteasome 26S ATPase subunit 6 SPATA5 0.101 spermatogenesis associated 5 PSMC1 0.095 proteasome 26S ATPase subunit 1 LOC652826 0.093 PREDICTED: similar to proteasome 26S ATPase subunit ... PSMC4 0.093 proteasome 26S ATPase subunit 4 isoform 2 PSMC4 0.093 proteasome 26S ATPase subunit 4 isoform 1 NVL 0.093 nuclear VCP-like isoform 2 NVL 0.093 nuclear VCP-like isoform 1 PSMC3 0.090 proteasome 26S ATPase subunit 3 SPATA5L1 0.084 spermatogenesis associated 5-like 1 PEX6 0.083 peroxisomal biogenesis factor 6 PEX1 0.072 peroxin1 ATAD2 0.071 ATPase family, AAA domain containing 2 ATAD2B 0.068 ATPase family, AAA domain containing 2B KATNA1 0.068 katanin p60 subunit A 1 KATNAL1 0.066 katanin p60 subunit A-like 1 KATNAL1 0.066 katanin p60 subunit A-like 1 KATNAL2 0.066 katanin p60 subunit A-like 2 LOC345645 0.064 PREDICTED: similar to hCG2002932 LOC345645 0.064 PREDICTED: similar to hCG2002932 LOC345645 0.064 PREDICTED: hypothetical protein LOC345645 SPAST 0.060 spastin isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.