YME1L1 35793

Name: YME1L1	Sequence: fasta or formatted (716aa)		NCBI GI: 7657689
Description: YME1-like 1 isoform 3		Referenced in: Metalloproteases
Other entries for this name: alt prot [773aa] YME1-like 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 49 2 C cysteine 0.6 4 1 D aspartate 4.7 34 1 E glutamate 7.1 51 2 F phenylalanine 4.7 34 2 G glycine 6.7 48 2 H histidine 2.7 19 2 I isoleucine 5.9 42 3 K lysine 7.1 51 2 L leucine 10.3 74 3 M methionine 2.4 17 1 N asparagine 4.2 30 1 P proline 4.5 32 2 Q glutamine 4.1 29 1 R arginine 5.4 39 2 S serine 7.5 54 2 T threonine 6.3 45 3 V valine 6.4 46 2 W tryptophan 0.6 4 1 Y tyrosine 2.0 14 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 YME1-like 1 isoform 3 YME1L1 0.970 YME1-like 1 isoform 1 AFG3L2 0.238 AFG3 ATPase family gene 3-like 2 SPG7 0.207 spastic paraplegia 7 isoform 1 PSMC5 0.113 proteasome 26S ATPase subunit 5 VCP 0.110 valosin-containing protein PSMC2 0.107 proteasome 26S ATPase subunit 2 PSMC6 0.103 proteasome 26S ATPase subunit 6 PSMC1 0.097 proteasome 26S ATPase subunit 1 PSMC3 0.097 proteasome 26S ATPase subunit 3 SPATA5L1 0.095 spermatogenesis associated 5-like 1 SPG7 0.095 spastic paraplegia 7 isoform 2 SPATA5 0.095 spermatogenesis associated 5 NVL 0.093 nuclear VCP-like isoform 2 NVL 0.093 nuclear VCP-like isoform 1 LOC652826 0.092 PREDICTED: similar to proteasome 26S ATPase subunit ... PSMC4 0.092 proteasome 26S ATPase subunit 4 isoform 2 PSMC4 0.092 proteasome 26S ATPase subunit 4 isoform 1 PEX6 0.087 peroxisomal biogenesis factor 6 KATNA1 0.087 katanin p60 subunit A 1 KATNAL1 0.087 katanin p60 subunit A-like 1 KATNAL1 0.087 katanin p60 subunit A-like 1 PEX1 0.084 peroxin1 VPS4B 0.077 vacuolar protein sorting factor 4B VPS4A 0.074 vacuolar protein sorting factor 4A ATAD2 0.074 ATPase family, AAA domain containing 2 SPAST 0.073 spastin isoform 2 SPAST 0.073 spastin isoform 1 FIGNL1 0.072 fidgetin-like 1 FIGNL1 0.072 fidgetin-like 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.