PSMB5 29248

Name: PSMB5	Sequence: fasta or formatted (263aa)		NCBI GI: 4506201
Description: proteasome beta 5 subunit isoform 1		Referenced in: Proteasome
Other entries for this name: alt prot [160aa] proteasome beta 5 subunit isoform 2 alt prot [203aa] proteasome beta 5 subunit isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.0 29 3 C cysteine 1.1 3 1 D aspartate 5.3 14 1 E glutamate 4.9 13 2 F phenylalanine 2.3 6 2 G glycine 12.2 32 2 H histidine 1.5 4 1 I isoleucine 4.2 11 1 K lysine 3.0 8 2 L leucine 9.5 25 2 M methionine 3.0 8 1 N asparagine 2.7 7 1 P proline 3.4 9 1 Q glutamine 2.3 6 1 R arginine 6.8 18 2 S serine 8.0 21 2 T threonine 3.8 10 3 V valine 6.8 18 1 W tryptophan 1.5 4 1 Y tyrosine 6.5 17 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 proteasome beta 5 subunit isoform 1 PSMB5 0.621 proteasome beta 5 subunit isoform 3 PSMB5 0.602 proteasome beta 5 subunit isoform 2 PSMB8 0.558 proteasome beta 8 subunit isoform E2 proprotein [Hom... PSMB8 0.558 proteasome beta 8 subunit isoform E1 proprotein [Homo... PSMB11 0.420 proteasome beta 11 subunit PSMB6 0.152 proteasome beta 6 subunit PSMB9 0.128 proteasome beta 9 subunit isoform 2 proprotein [Homo... PSMB9 0.128 proteasome beta 9 subunit isoform 1 proprotein PSMB7 0.122 proteasome beta 7 subunit proprotein PSMB10 0.108 proteasome beta 10 subunit proprotein PSMB1 0.061 proteasome beta 1 subunit PSMB4 0.053 proteasome beta 4 subunit PSMB3 0.053 proteasome beta 3 subunit PSMA2 0.047 proteasome subunit alpha type 2 PSMA5 0.043 proteasome alpha 5 subunit PSMA7 0.036 proteasome alpha 7 subunit PSMA8 0.024 proteasome alpha 8 subunit isoform 2 PSMA1 0.020 proteasome alpha 1 subunit isoform 2 PSMA1 0.020 proteasome alpha 1 subunit isoform 1 ITGA3 0.018 integrin alpha 3 isoform a precursor ITGA3 0.018 integrin alpha 3 isoform b precursor COL8A2 0.008 collagen, type VIII, alpha 2 LOC100133862 0.008 PREDICTED: similar to hCG1773549 NFKB1 0.006 nuclear factor kappa-B, subunit 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.