PSMB5 11176

Name: PSMB5	Sequence: fasta or formatted (160aa)		NCBI GI: 195539356
Description: proteasome beta 5 subunit isoform 2		Referenced in: Proteasome
Other entries for this name: alt prot [203aa] proteasome beta 5 subunit isoform 3 alt prot [263aa] proteasome beta 5 subunit isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.6 17 3 C cysteine 1.9 3 1 D aspartate 6.2 10 1 E glutamate 5.0 8 1 F phenylalanine 1.2 2 1 G glycine 11.2 18 2 H histidine 1.2 2 1 I isoleucine 3.8 6 1 K lysine 3.1 5 1 L leucine 6.9 11 2 M methionine 3.8 6 1 N asparagine 3.1 5 1 P proline 1.2 2 1 Q glutamine 2.5 4 1 R arginine 8.1 13 2 S serine 9.4 15 2 T threonine 2.5 4 1 V valine 6.9 11 1 W tryptophan 1.9 3 1 Y tyrosine 9.4 15 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 proteasome beta 5 subunit isoform 2 PSMB5 1.000 proteasome beta 5 subunit isoform 1 PSMB8 0.675 proteasome beta 8 subunit isoform E2 proprotein [Hom... PSMB8 0.675 proteasome beta 8 subunit isoform E1 proprotein [Homo... PSMB11 0.495 proteasome beta 11 subunit PSMB5 0.367 proteasome beta 5 subunit isoform 3 PSMB9 0.131 proteasome beta 9 subunit isoform 2 proprotein [Homo... PSMB9 0.131 proteasome beta 9 subunit isoform 1 proprotein PSMB6 0.125 proteasome beta 6 subunit PSMB7 0.115 proteasome beta 7 subunit proprotein PSMB10 0.089 proteasome beta 10 subunit proprotein PSMB1 0.062 proteasome beta 1 subunit PSMA2 0.056 proteasome subunit alpha type 2 PSMB3 0.043 proteasome beta 3 subunit ITGA3 0.030 integrin alpha 3 isoform a precursor ITGA3 0.030 integrin alpha 3 isoform b precursor PSMA5 0.020 proteasome alpha 5 subunit COL8A2 0.013 collagen, type VIII, alpha 2 TLR9 0.007 toll-like receptor 9 isoform A precursor LRP5 0.007 low density lipoprotein receptor-related protein 5 ... PSMA1 0.007 proteasome alpha 1 subunit isoform 2 PSMA1 0.007 proteasome alpha 1 subunit isoform 1 SEMG1 0.007 semenogelin I isoform b preproprotein SEMG1 0.007 semenogelin I isoform a preproprotein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.