GPNMB 29049

Name: GPNMB	Sequence: fasta or formatted (560aa)		NCBI GI: 4505405
Description: glycoprotein (transmembrane) nmb isoform b precursor		Referenced in: Lysosomes and Related Organelles
Other entries for this name: alt prot [572aa] glycoprotein (transmembrane) nmb isoform a precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.8 27 3 C cysteine 2.3 13 1 D aspartate 5.5 31 2 E glutamate 4.3 24 1 F phenylalanine 4.6 26 2 G glycine 6.2 35 2 H histidine 2.5 14 2 I isoleucine 4.6 26 2 K lysine 4.1 23 2 L leucine 8.6 48 3 M methionine 1.8 10 1 N asparagine 7.3 41 1 P proline 7.7 43 7 Q glutamine 3.0 17 1 R arginine 4.6 26 2 S serine 7.1 40 2 T threonine 6.4 36 1 V valine 8.9 50 2 W tryptophan 2.0 11 1 Y tyrosine 3.4 19 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 glycoprotein (transmembrane) nmb isoform b precursor ... GPNMB 0.992 glycoprotein (transmembrane) nmb isoform a precursor... SILV 0.123 silver homolog TMEM130 0.022 transmembrane protein 130 isoform c TMEM130 0.022 transmembrane protein 130 isoform a TMEM130 0.022 transmembrane protein 130 isoform b PCLO 0.013 piccolo isoform 2 PCLO 0.013 piccolo isoform 1 PELP1 0.012 proline, glutamic acid and leucine rich protein 1 [... IRF3 0.012 interferon regulatory factor 3 MEX3C 0.012 ring finger and KH domain containing 2 FMNL2 0.012 formin-like 2 HOXB4 0.012 homeobox B4 MANEAL 0.012 mannosidase, endo-alpha-like isoform 3 MANEAL 0.012 mannosidase, endo-alpha-like isoform 1 ZFHX4 0.011 zinc finger homeodomain 4 RAPH1 0.011 Ras association and pleckstrin homology domains 1 is... SOCS7 0.011 suppressor of cytokine signaling 7 SOBP 0.011 sine oculis binding protein homolog ZNF341 0.011 zinc finger protein 341 WIPF3 0.010 WAS/WASL interacting protein family, member 3 [Homo... FMN1 0.010 formin 1 LOC645529 0.010 PREDICTED: similar to Putative acrosin-like proteas... HCN2 0.010 hyperpolarization activated cyclic nucleotide-gated... PKD1 0.010 polycystin 1 isoform 2 precursor PKD1 0.010 polycystin 1 isoform 1 precursor WASL 0.010 Wiskott-Aldrich syndrome gene-like protein KLF2 0.010 Kruppel-like factor BAI1 0.010 brain-specific angiogenesis inhibitor 1 precursor [... DAAM2 0.010 dishevelled associated activator of morphogenesis 2 ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.