Guide to the Human Genome
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Name: BRUNOL4 Sequence: fasta or formatted (486aa) NCBI GI: 13123778
Description:

bruno-like 4, RNA binding protein isoform 1

Referenced in:

RNA-binding Proteins

Other entries for this name:
alt prot [485aa] bruno-like 4, RNA binding protein isoform 2
alt prot [484aa] bruno-like 4, RNA binding protein isoform 3
alt prot [448aa] bruno-like 4, RNA binding protein isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.2         64           3
 C cysteine            1.2          6           1
 D aspartate           3.5         17           2
 E glutamate           3.9         19           2
 F phenylalanine       4.7         23           1
 G glycine             9.3         45           2
 H histidine           1.9          9           1
 I isoleucine          4.1         20           1
 K lysine              4.3         21           1
 L leucine             7.0         34           1
 M methionine          5.3         26           1
 N asparagine          4.5         22           1
 P proline             9.1         44           3
 Q glutamine           8.4         41           3
 R arginine            3.5         17           2
 S serine              6.6         32           3
 T threonine           3.7         18           1
 V valine              2.9         14           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.9         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   bruno-like 4, RNA binding protein isoform 1 
BRUNOL4               0.993   bruno-like 4, RNA binding protein isoform 2 
BRUNOL4               0.983   bruno-like 4, RNA binding protein isoform 3 
BRUNOL4               0.888   bruno-like 4, RNA binding protein isoform 4 
TNRC4                 0.636   trinucleotide repeat containing 4 
BRUNOL6               0.630   bruno-like 6, RNA binding protein 
BRUNOL5               0.610   bruno-like 5, RNA binding protein isoform 1 
CUGBP1                0.351   CUG triplet repeat, RNA-binding protein 1 isoform 1 [...
CUGBP1                0.349   CUG triplet repeat, RNA-binding protein 1 isoform 2 ...
CUGBP2                0.349   CUG triplet repeat, RNA binding protein 2 isoform 3 ...
CUGBP1                0.347   CUG triplet repeat, RNA-binding protein 1 isoform 3 ...
CUGBP2                0.346   CUG triplet repeat, RNA binding protein 2 isoform 2...
BRUNOL5               0.343   bruno-like 5, RNA binding protein isoform 2 
CUGBP2                0.342   CUG triplet repeat, RNA binding protein 2 isoform 4...
CUGBP2                0.341   CUG triplet repeat, RNA binding protein 2 isoform 1 ...
SF3B4                 0.067   splicing factor 3b, subunit 4 
ELAVL2                0.062   ELAV (embryonic lethal, abnormal vision, Drosophila...
RBM23                 0.061   RNA binding motif protein 23 isoform 1 
RBM23                 0.061   RNA binding motif protein 23 isoform 2 
ELAVL3                0.057   ELAV-like protein 3 isoform 1 
ELAVL3                0.057   ELAV-like protein 3 isoform 2 
RBM23                 0.057   RNA binding motif protein 23 isoform 3 
RBM45                 0.057   RNA binding motif protein 45 
ELAVL4                0.056   ELAV-like 4 isoform 1 
ELAVL4                0.056   ELAV-like 4 isoform 5 
ELAVL4                0.056   ELAV-like 4 isoform 4 
ELAVL4                0.056   ELAV-like 4 isoform 3 
ELAVL4                0.056   ELAV-like 4 isoform 2 
PUF60                 0.052   poly-U binding splicing factor 60KDa isoform c [Hom...
PUF60                 0.052   poly-U binding splicing factor 60KDa isoform b [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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