Guide to the Human Genome
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Name: KCNK3 Sequence: fasta or formatted (394aa) NCBI GI: 4504849
Description:

potassium channel, subfamily K, member 3

Referenced in:

Potassium Channels

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         34           3
 C cysteine            2.5         10           1
 D aspartate           2.8         11           1
 E glutamate           4.3         17           2
 F phenylalanine       5.6         22           2
 G glycine             9.6         38           7
 H histidine           2.5         10           1
 I isoleucine          4.6         18           2
 K lysine              2.8         11           2
 L leucine            10.7         42           2
 M methionine          2.8         11           1
 N asparagine          2.0          8           1
 P proline             2.5         10           1
 Q glutamine           4.3         17           2
 R arginine            7.4         29           2
 S serine              8.4         33           2
 T threonine           7.1         28           2
 V valine              6.1         24           2
 W tryptophan          0.8          3           1
 Y tyrosine            4.6         18           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium channel, subfamily K, member 3 
KCNK9                 0.526   potassium channel, subfamily K, member 9 
KCNK15                0.398   potassium family, subfamily K, member 15 
KCNK2                 0.144   potassium channel, subfamily K, member 2 isoform b [...
KCNK2                 0.144   potassium channel, subfamily K, member 2 isoform c ...
KCNK2                 0.144   potassium channel, subfamily K, member 2 isoform a [...
KCNK16                0.144   potassium channel, subfamily K, member 16 isoform 3...
KCNK16                0.144   potassium channel, subfamily K, member 16 isoform 2 ...
KCNK13                0.142   potassium channel, subfamily K, member 13 
KCNK16                0.138   potassium channel, subfamily K, member 16 isoform 4...
KCNK16                0.138   potassium channel, subfamily K, member 16 isoform 1...
KCNK10                0.137   potassium channel, subfamily K, member 10 isoform 3 ...
KCNK10                0.137   potassium channel, subfamily K, member 10 isoform 2 ...
KCNK10                0.137   potassium channel, subfamily K, member 10 isoform 1 ...
KCNK5                 0.124   potassium channel, subfamily K, member 5 
KCNK1                 0.124   potassium channel, subfamily K, member 1 
KCNK4                 0.123   TRAAK 
KCNK12                0.115   potassium channel, subfamily K, member 12 
KCNK17                0.114   potassium channel, subfamily K, member 17 isoform 1 ...
KCNK17                0.111   potassium channel, subfamily K, member 17 isoform 2...
KCNK6                 0.106   potassium channel, subfamily K, member 6 
KCNK7                 0.077   potassium channel, subfamily K, member 7 isoform C [H...
KCNK7                 0.077   potassium channel, subfamily K, member 7 isoform A [...
KCNK7                 0.077   potassium channel, subfamily K, member 7 isoform B [...
KCNK7                 0.077   potassium channel, subfamily K, member 7 isoform B [...
KCNK18                0.064   potassium channel, subfamily K, member 18 
KCNH5                 0.022   potassium voltage-gated channel, subfamily H, member...
KCNH5                 0.022   potassium voltage-gated channel, subfamily H, member...
KCNH5                 0.022   potassium voltage-gated channel, subfamily H, member...
KCNH1                 0.022   potassium voltage-gated channel, subfamily H, member ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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