Guide to the Human Genome
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Name: KCNK1 Sequence: fasta or formatted (336aa) NCBI GI: 4504847
Description:

potassium channel, subfamily K, member 1

Referenced in:

Potassium Channels

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         19           2
 C cysteine            2.7          9           1
 D aspartate           3.9         13           2
 E glutamate           6.2         21           2
 F phenylalanine       8.6         29           3
 G glycine             6.5         22           2
 H histidine           3.0         10           1
 I isoleucine          4.8         16           2
 K lysine              4.2         14           2
 L leucine            12.5         42           3
 M methionine          1.2          4           1
 N asparagine          2.4          8           1
 P proline             2.4          8           1
 Q glutamine           4.2         14           2
 R arginine            4.2         14           2
 S serine              8.0         27           2
 T threonine           4.5         15           2
 V valine              9.8         33           2
 W tryptophan          1.5          5           1
 Y tyrosine            3.9         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium channel, subfamily K, member 1 
KCNK6                 0.344   potassium channel, subfamily K, member 6 
KCNK7                 0.271   potassium channel, subfamily K, member 7 isoform A [...
KCNK7                 0.225   potassium channel, subfamily K, member 7 isoform C [H...
KCNK7                 0.225   potassium channel, subfamily K, member 7 isoform B [...
KCNK7                 0.225   potassium channel, subfamily K, member 7 isoform B [...
KCNK16                0.199   potassium channel, subfamily K, member 16 isoform 3...
KCNK16                0.199   potassium channel, subfamily K, member 16 isoform 2 ...
KCNK10                0.193   potassium channel, subfamily K, member 10 isoform 3 ...
KCNK10                0.193   potassium channel, subfamily K, member 10 isoform 2 ...
KCNK10                0.193   potassium channel, subfamily K, member 10 isoform 1 ...
KCNK16                0.187   potassium channel, subfamily K, member 16 isoform 1...
KCNK16                0.185   potassium channel, subfamily K, member 16 isoform 4...
KCNK2                 0.183   potassium channel, subfamily K, member 2 isoform b [...
KCNK2                 0.183   potassium channel, subfamily K, member 2 isoform c ...
KCNK2                 0.183   potassium channel, subfamily K, member 2 isoform a [...
KCNK4                 0.182   TRAAK 
KCNK5                 0.165   potassium channel, subfamily K, member 5 
KCNK3                 0.145   potassium channel, subfamily K, member 3 
KCNK17                0.145   potassium channel, subfamily K, member 17 isoform 1 ...
KCNK9                 0.141   potassium channel, subfamily K, member 9 
KCNK15                0.136   potassium family, subfamily K, member 15 
KCNK13                0.135   potassium channel, subfamily K, member 13 
KCNK17                0.127   potassium channel, subfamily K, member 17 isoform 2...
KCNK12                0.122   potassium channel, subfamily K, member 12 
KCNK18                0.054   potassium channel, subfamily K, member 18 
KCNT1                 0.024   potassium channel, subfamily T, member 1 
KCNT2                 0.020   potassium channel, subfamily T, member 2 
KCNH1                 0.018   potassium voltage-gated channel, subfamily H, member ...
KCNH1                 0.018   potassium voltage-gated channel, subfamily H, member...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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