Guide to the Human Genome
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Name: KCNK12 Sequence: fasta or formatted (430aa) NCBI GI: 11545761
Description:

potassium channel, subfamily K, member 12

Referenced in:

Potassium Channels

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.1         52           2
 C cysteine            4.4         19           6
 D aspartate           2.6         11           1
 E glutamate           3.5         15           1
 F phenylalanine       5.6         24           2
 G glycine             8.6         37           2
 H histidine           1.2          5           1
 I isoleucine          4.0         17           2
 K lysine              1.4          6           1
 L leucine            13.0         56           2
 M methionine          1.6          7           1
 N asparagine          3.3         14           2
 P proline             4.4         19           3
 Q glutamine           1.6          7           1
 R arginine           10.7         46           3
 S serine              8.6         37           2
 T threonine           4.2         18           2
 V valine              5.3         23           2
 W tryptophan          1.2          5           1
 Y tyrosine            2.8         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium channel, subfamily K, member 12 
KCNK13                0.590   potassium channel, subfamily K, member 13 
KCNK6                 0.107   potassium channel, subfamily K, member 6 
KCNK3                 0.105   potassium channel, subfamily K, member 3 
KCNK16                0.102   potassium channel, subfamily K, member 16 isoform 2 ...
KCNK2                 0.099   potassium channel, subfamily K, member 2 isoform b [...
KCNK2                 0.099   potassium channel, subfamily K, member 2 isoform c ...
KCNK2                 0.099   potassium channel, subfamily K, member 2 isoform a [...
KCNK1                 0.095   potassium channel, subfamily K, member 1 
KCNK16                0.095   potassium channel, subfamily K, member 16 isoform 3...
KCNK15                0.095   potassium family, subfamily K, member 15 
KCNK10                0.094   potassium channel, subfamily K, member 10 isoform 3 ...
KCNK10                0.094   potassium channel, subfamily K, member 10 isoform 2 ...
KCNK10                0.094   potassium channel, subfamily K, member 10 isoform 1 ...
KCNK9                 0.092   potassium channel, subfamily K, member 9 
KCNK4                 0.089   TRAAK 
KCNK16                0.088   potassium channel, subfamily K, member 16 isoform 4...
KCNK16                0.088   potassium channel, subfamily K, member 16 isoform 1...
KCNK5                 0.080   potassium channel, subfamily K, member 5 
KCNK17                0.069   potassium channel, subfamily K, member 17 isoform 1 ...
KCNK17                0.061   potassium channel, subfamily K, member 17 isoform 2...
KCNK7                 0.055   potassium channel, subfamily K, member 7 isoform A [...
KCNK7                 0.052   potassium channel, subfamily K, member 7 isoform C [H...
KCNK7                 0.052   potassium channel, subfamily K, member 7 isoform B [...
KCNK7                 0.052   potassium channel, subfamily K, member 7 isoform B [...
KCNT2                 0.019   potassium channel, subfamily T, member 2 
KCNK18                0.018   potassium channel, subfamily K, member 18 
KCNT1                 0.013   potassium channel, subfamily T, member 1 
RCAN1                 0.011   calcipressin 1 isoform a 
KCND1                 0.008   potassium voltage-gated channel, Shal-related subfam...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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