Guide to the Human Genome
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Name: HRG Sequence: fasta or formatted (525aa) NCBI GI: 4504489
Description:

histidine-rich glycoprotein precursor

Referenced in:

Protein Composition and Structure
Liver

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         22           2
 C cysteine            3.2         17           2
 D aspartate           5.9         31           2
 E glutamate           5.3         28           2
 F phenylalanine       5.0         26           2
 G glycine             6.7         35           2
 H histidine          12.6         66           3
 I isoleucine          2.5         13           1
 K lysine              4.2         22           1
 L leucine             6.5         34           3
 M methionine          0.6          3           1
 N asparagine          3.8         20           3
 P proline            12.4         65           5
 Q glutamine           3.4         18           1
 R arginine            6.3         33           3
 S serine              6.9         36           2
 T threonine           3.2         17           2
 V valine              5.0         26           1
 W tryptophan          0.4          2           1
 Y tyrosine            2.1         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   histidine-rich glycoprotein precursor 
FETUB                 0.047   fetuin B 
IQSEC1                0.044   IQ motif and Sec7 domain 1 isoform a 
SLC39A7               0.031   solute carrier family 39, member 7 
SLC39A7               0.031   solute carrier family 39, member 7 
CREB5                 0.030   cAMP responsive element binding protein 5 isoform de...
CREB5                 0.030   cAMP responsive element binding protein 5 isoform be...
CREB5                 0.030   cAMP responsive element binding protein 5 isoform ga...
CREB5                 0.030   cAMP responsive element binding protein 5 isoform al...
CATSPER1              0.030   sperm-associated cation channel 1 
PPP1R10               0.028   protein phosphatase 1, regulatory subunit 10 
FOXB2                 0.028   forkhead box B2 
NUFIP2                0.027   nuclear fragile X mental retardation protein interac...
SHANK1                0.026   SH3 and multiple ankyrin repeat domains 1 
PRB2                  0.026   proline-rich protein BstNI subfamily 2 
IQSEC2                0.025   IQ motif and Sec7 domain 2 isoform1 
SF3B4                 0.024   splicing factor 3b, subunit 4 
PRB3                  0.024   proline-rich protein BstNI subfamily 3 precursor [H...
SF1                   0.023   splicing factor 1 isoform 3 
SF1                   0.023   splicing factor 1 isoform 2 
SF1                   0.023   splicing factor 1 isoform 1 
PHLDA1                0.023   pleckstrin homology-like domain, family A, member 1 ...
FUSSEL18              0.023   PREDICTED: functional smad suppressing element 18 [...
LOC644844             0.023   hypothetical protein LOC644844 
FUSSEL18              0.022   PREDICTED: functional smad suppressing element 18 [...
FUSSEL18              0.022   PREDICTED: functional smad suppressing element 18 [...
MLL5                  0.022   myeloid/lymphoid or mixed-lineage leukemia 5 
MLL5                  0.022   myeloid/lymphoid or mixed-lineage leukemia 5 
ACRV1                 0.022   acrosomal vesicle protein 1 isoform a precursor [Homo...
ACRV1                 0.022   acrosomal vesicle protein 1 isoform b precursor [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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