CCT6A 28396

Name: CCT6A	Sequence: fasta or formatted (531aa)		NCBI GI: 4502643
Description: chaperonin containing TCP1, subunit 6A isoform a		Referenced in: Heat-Shock Proteins and Chaperonins Small RNAs in RNA Processing
Other entries for this name: alt prot [486aa] chaperonin containing TCP1, subunit 6A isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.8 52 2 C cysteine 1.5 8 1 D aspartate 6.4 34 2 E glutamate 7.7 41 2 F phenylalanine 2.4 13 2 G glycine 7.0 37 2 H histidine 2.3 12 1 I isoleucine 6.6 35 2 K lysine 8.5 45 2 L leucine 10.9 58 2 M methionine 2.6 14 1 N asparagine 3.4 18 2 P proline 2.6 14 1 Q glutamine 3.2 17 1 R arginine 4.7 25 2 S serine 4.9 26 2 T threonine 5.3 28 2 V valine 8.7 46 2 W tryptophan 0.2 1 1 Y tyrosine 1.3 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chaperonin containing TCP1, subunit 6A isoform a [Hom... CCT6A 0.894 chaperonin containing TCP1, subunit 6A isoform b [Ho... CCT6B 0.874 chaperonin containing TCP1, subunit 6B CCT3 0.240 chaperonin containing TCP1, subunit 3 isoform a [Hom... CCT3 0.239 chaperonin containing TCP1, subunit 3 isoform b [Hom... CCT5 0.225 chaperonin containing TCP1, subunit 5 (epsilon) [Hom... TCP1 0.217 T-complex protein 1 isoform a CCT7 0.211 chaperonin containing TCP1, subunit 7 isoform a [Homo... CCT4 0.210 chaperonin containing TCP1, subunit 4 (delta) CCT3 0.199 chaperonin containing TCP1, subunit 3 isoform c [Hom... CCT2 0.189 chaperonin containing TCP1, subunit 2 CCT8 0.151 chaperonin containing TCP1, subunit 8 (theta) TCP1 0.117 T-complex protein 1 isoform b CCT7 0.108 chaperonin containing TCP1, subunit 7 isoform b [Hom... CCT8L2 0.105 T-complex protein 1 HSPD1 0.037 chaperonin HSPD1 0.037 chaperonin BBS10 0.022 Bardet-Biedl syndrome 10 CEP250 0.011 centrosomal protein 2 EIF3A 0.010 eukaryotic translation initiation factor 3, subunit 1... DNAH7 0.008 dynein, axonemal, heavy chain 7 MYH2 0.008 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.008 myosin, heavy chain 2, skeletal muscle, adult [Homo... CCDC91 0.008 GGA binding partner GOLGB1 0.008 golgi autoantigen, golgin subfamily b, macrogolgin ... HMMR 0.007 hyaluronan-mediated motility receptor isoform d [Ho... HMMR 0.007 hyaluronan-mediated motility receptor isoform a [Ho... HMMR 0.007 hyaluronan-mediated motility receptor isoform c [Ho... HMMR 0.007 hyaluronan-mediated motility receptor isoform b [Ho... TPR 0.007 nuclear pore complex-associated protein TPR Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.