HSPD1 25540

Name: HSPD1	Sequence: fasta or formatted (573aa)		NCBI GI: 31542947
Description: chaperonin		Referenced in: Heat-Shock Proteins and Chaperonins Mitochondria
Other entries for this name: alt mRNA [573aa] chaperonin
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.9 57 2 C cysteine 0.5 3 1 D aspartate 6.5 37 2 E glutamate 7.5 43 2 F phenylalanine 1.7 10 1 G glycine 9.8 56 3 H histidine 0.5 3 1 I isoleucine 7.5 43 2 K lysine 9.2 53 2 L leucine 8.4 48 2 M methionine 3.1 18 1 N asparagine 3.5 20 2 P proline 3.3 19 1 Q glutamine 3.0 17 1 R arginine 3.8 22 2 S serine 4.4 25 3 T threonine 5.9 34 3 V valine 9.9 57 3 W tryptophan 0.2 1 1 Y tyrosine 1.2 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chaperonin HSPD1 1.000 chaperonin CCT2 0.057 chaperonin containing TCP1, subunit 2 CCT4 0.053 chaperonin containing TCP1, subunit 4 (delta) CCT7 0.049 chaperonin containing TCP1, subunit 7 isoform a [Homo... CCT5 0.040 chaperonin containing TCP1, subunit 5 (epsilon) [Hom... CCT6A 0.035 chaperonin containing TCP1, subunit 6A isoform a [Hom... CCT6B 0.033 chaperonin containing TCP1, subunit 6B CCT3 0.032 chaperonin containing TCP1, subunit 3 isoform a [Hom... TCP1 0.031 T-complex protein 1 isoform a CCT3 0.029 chaperonin containing TCP1, subunit 3 isoform b [Hom... CCT3 0.019 chaperonin containing TCP1, subunit 3 isoform c [Hom... CCT6A 0.019 chaperonin containing TCP1, subunit 6A isoform b [Ho... CCT8 0.014 chaperonin containing TCP1, subunit 8 (theta) CCT8L2 0.012 T-complex protein 1 CCT7 0.011 chaperonin containing TCP1, subunit 7 isoform b [Hom... TAL1 0.009 T-cell acute lymphocytic leukemia 1 EEA1 0.008 early endosome antigen 1, 162kD MYO18A 0.008 myosin 18A isoform b MYO18A 0.008 myosin 18A isoform a BBS10 0.007 Bardet-Biedl syndrome 10 KIF21B 0.007 kinesin family member 21B HDLBP 0.007 high density lipoprotein binding protein HDLBP 0.007 high density lipoprotein binding protein SIKE 0.006 suppressor of IKK epsilon isoform 1 SIKE 0.006 suppressor of IKK epsilon isoform 2 MACF1 0.005 microfilament and actin filament cross-linker protei... MACF1 0.005 microfilament and actin filament cross-linker protei... LETM1 0.005 leucine zipper-EF-hand containing transmembrane prote... GRIN2D 0.005 N-methyl-D-aspartate receptor subunit 2D precursor ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.