Guide to the Human Genome
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Name: BAK1 Sequence: fasta or formatted (211aa) NCBI GI: 4502363
Description:

BCL2-antagonist/killer 1

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         18           2
 C cysteine            0.9          2           1
 D aspartate           2.8          6           2
 E glutamate           6.6         14           2
 F phenylalanine       5.7         12           2
 G glycine            10.0         21           2
 H histidine           2.8          6           2
 I isoleucine          3.8          8           2
 K lysine              0.9          2           1
 L leucine            10.0         21           2
 M methionine          2.4          5           1
 N asparagine          2.8          6           1
 P proline             5.2         11           2
 Q glutamine           8.1         17           2
 R arginine            6.2         13           2
 S serine              4.7         10           2
 T threonine           4.3          9           1
 V valine              9.5         20           2
 W tryptophan          1.4          3           1
 Y tyrosine            3.3          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BCL2-antagonist/killer 1 
LOC100289713          0.973   PREDICTED: hypothetical protein XP_002348091 
BCL2                  0.111   B-cell lymphoma protein 2 beta isoform 
BCL2L1                0.111   BCL2-like 1 isoform 1 
BCL2                  0.106   B-cell lymphoma protein 2 alpha isoform 
BCL2L2                0.097   BCL2-like 2 protein 
BAX                   0.074   BCL2-associated X protein isoform beta 
BAX                   0.072   BCL2-associated X protein isoform alpha 
BAX                   0.072   BCL2-associated X protein isoform sigma 
MCL1                  0.067   myeloid cell leukemia sequence 1 isoform 1 
BAX                   0.050   BCL2-associated X protein isoform delta 
BOK                   0.050   BCL2-related ovarian killer 
BCL2A1                0.050   BCL2-related protein A1 isoform 2 
BCL2A1                0.050   BCL2-related protein A1 isoform 1 
ZFP36L2               0.017   zinc finger protein 36, C3H type-like 2 
ARHGAP30              0.015   Rho GTPase activating protein 30 isoform 2 
MICALL1               0.012   molecule interacting with Rab13 
LRRC16B               0.012   leucine rich repeat containing 16B 
SLC28A3               0.010   concentrative Na+-nucleoside cotransporter 
NCOR1                 0.007   nuclear receptor co-repressor 1 
AATK                  0.007   apoptosis-associated tyrosine kinase 
MAST4                 0.007   microtubule associated serine/threonine kinase fami...
BRD4                  0.007   bromodomain-containing protein 4 isoform long 
NUP98                 0.007   nucleoporin 98kD isoform 4 
NUP98                 0.007   nucleoporin 98kD isoform 1 
PPIL6                 0.005   peptidylprolyl isomerase-like 6 isoform 1 
PPIL6                 0.005   peptidylprolyl isomerase-like 6 isoform 2 
TGFB1I1               0.005   transforming growth factor beta 1 induced transcrip...
TGFB1I1               0.005   transforming growth factor beta 1 induced transcript...
HIC2                  0.005   hypermethylated in cancer 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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