Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: BCL2A1 Sequence: fasta or formatted (175aa) NCBI GI: 4757840
Description:

BCL2-related protein A1 isoform 1

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death

Other entries for this name:
alt prot [163aa] BCL2-related protein A1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.4          6           1
 C cysteine            2.9          5           1
 D aspartate           4.0          7           1
 E glutamate           8.0         14           1
 F phenylalanine       6.3         11           1
 G glycine             6.9         12           2
 H histidine           0.0          0           0
 I isoleucine          7.4         13           2
 K lysine              7.4         13           2
 L leucine             8.0         14           2
 M methionine          2.9          5           1
 N asparagine          5.7         10           2
 P proline             2.9          5           1
 Q glutamine           6.3         11           2
 R arginine            3.4          6           1
 S serine              5.1          9           1
 T threonine           5.1          9           1
 V valine              8.6         15           2
 W tryptophan          2.3          4           1
 Y tyrosine            3.4          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BCL2-related protein A1 isoform 1 
BCL2A1                0.779   BCL2-related protein A1 isoform 2 
BCL2                  0.110   B-cell lymphoma protein 2 alpha isoform 
ST20                  0.107   cervical cancer suppressor-1 
ST20                  0.107   cervical cancer suppressor-1 
BCL2                  0.104   B-cell lymphoma protein 2 beta isoform 
BAX                   0.093   BCL2-associated X protein isoform delta 
BAX                   0.087   BCL2-associated X protein isoform alpha 
MCL1                  0.087   myeloid cell leukemia sequence 1 isoform 1 
BCL2L1                0.081   BCL2-like 1 isoform 1 
BAX                   0.078   BCL2-associated X protein isoform beta 
BAX                   0.078   BCL2-associated X protein isoform sigma 
LOC100289713          0.066   PREDICTED: hypothetical protein XP_002348091 
BCL2L2                0.063   BCL2-like 2 protein 
BAK1                  0.060   BCL2-antagonist/killer 1 
BOK                   0.033   BCL2-related ovarian killer 
SLC39A12              0.021   solute carrier family 39 (zinc transporter), member...
SLC39A12              0.021   solute carrier family 39 (zinc transporter), member...
BCL2L10               0.015   BCL2-like 10 (apoptosis facilitator) 
BCL2L14               0.015   BCL2-like 14 isoform 1 
BCL2L14               0.015   BCL2-like 14 isoform 1 
SYNE2                 0.009   spectrin repeat containing, nuclear envelope 2 isof...
SYNE2                 0.009   spectrin repeat containing, nuclear envelope 2 isof...
PCDH17                0.009   protocadherin 17 precursor 
ST18                  0.009   suppression of tumorigenicity 18 
DTX1                  0.009   deltex homolog 1 
LRRC17                0.006   leucine rich repeat containing 17 isoform 1 
LRRC17                0.006   leucine rich repeat containing 17 isoform 2 
TTC9B                 0.006   tetratricopeptide repeat domain 9B 
TTC9C                 0.006   tetratricopeptide repeat domain 9C 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press