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Search of human proteins with 45007002
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|45007002 longevity assurance homolog 6 [Homo sapiens]
(384 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|45007002 longevity assurance homolog 6 [Homo sapiens] 810 0.0
gi|22218345 LAG1 homolog, ceramide synthase 5 [Homo sapiens] 535 e-152
gi|32455256 LAG1 longevity assurance 2 [Homo sapiens] 320 1e-87
gi|31077094 LAG1 longevity assurance 2 [Homo sapiens] 320 1e-87
gi|205360977 LAG1 homolog, ceramide synthase 4 [Homo sapiens] 319 2e-87
gi|116235446 LAG1 longevity assurance homolog 3 [Homo sapiens] 298 4e-81
gi|38176296 LAG1 homolog, ceramide synthase 1 isoform 2 [Homo sa... 100 2e-21
gi|11641421 LAG1 homolog, ceramide synthase 1 isoform 1 [Homo sa... 100 2e-21
gi|7657655 translocation associated membrane protein 1 [Homo sap... 57 2e-08
gi|6912450 translocation-associated membrane protein 2 [Homo sap... 54 2e-07
gi|19743884 regulatory factor X3 isoform b [Homo sapiens] 32 1.3
gi|224282187 HOP homeobox isoform a [Homo sapiens] 31 2.1
gi|224451023 HOP homeobox isoform b [Homo sapiens] 31 2.1
gi|21264589 HOP homeobox isoform b [Homo sapiens] 31 2.1
gi|21264587 HOP homeobox isoform b [Homo sapiens] 31 2.1
gi|24308434 glucose-6-phosphatase catalytic subunit 3 [Homo sapi... 31 2.1
gi|14149865 family with sequence similarity 176, member A [Homo ... 30 4.8
gi|205277349 family with sequence similarity 176, member A [Homo... 30 4.8
gi|239756689 PREDICTED: WD repeat domain 81 [Homo sapiens] 29 6.2
gi|239751186 PREDICTED: WD repeat domain 81 [Homo sapiens] 29 6.2
gi|239745674 PREDICTED: WD repeat domain 81 [Homo sapiens] 29 6.2
gi|30410785 LIM homeobox protein 1 [Homo sapiens] 29 6.2
gi|30023847 LIM homeobox protein 3 isoform a [Homo sapiens] 29 8.1
gi|7657303 LIM homeobox protein 3 isoform b [Homo sapiens] 29 8.1
>gi|45007002 longevity assurance homolog 6 [Homo sapiens]
Length = 384
Score = 810 bits (2091), Expect = 0.0
Identities = 384/384 (100%), Positives = 384/384 (100%)
Query: 1 MAGILAWFWNERFWLPHNVTWADLKNTEEATFPQAEDLYLAFPLAFCIFMVRLIFERFVA 60
MAGILAWFWNERFWLPHNVTWADLKNTEEATFPQAEDLYLAFPLAFCIFMVRLIFERFVA
Sbjct: 1 MAGILAWFWNERFWLPHNVTWADLKNTEEATFPQAEDLYLAFPLAFCIFMVRLIFERFVA 60
Query: 61 KPCAIALNIQANGPQIAPPNAILEKVFTAITKHPDEKRLEGLSKQLDWDVRSIQRWFRQR 120
KPCAIALNIQANGPQIAPPNAILEKVFTAITKHPDEKRLEGLSKQLDWDVRSIQRWFRQR
Sbjct: 61 KPCAIALNIQANGPQIAPPNAILEKVFTAITKHPDEKRLEGLSKQLDWDVRSIQRWFRQR 120
Query: 121 RNQEKPSTLTRFCESMWRFSFYLYVFTYGVRFLKKTPWLWNTRHCWYNYPYQPLTTDLHY 180
RNQEKPSTLTRFCESMWRFSFYLYVFTYGVRFLKKTPWLWNTRHCWYNYPYQPLTTDLHY
Sbjct: 121 RNQEKPSTLTRFCESMWRFSFYLYVFTYGVRFLKKTPWLWNTRHCWYNYPYQPLTTDLHY 180
Query: 181 YYILELSFYWSLMFSQFTDIKRKDFGIMFLHHLVSIFLITFSYVNNMARVGTLVLCLHDS 240
YYILELSFYWSLMFSQFTDIKRKDFGIMFLHHLVSIFLITFSYVNNMARVGTLVLCLHDS
Sbjct: 181 YYILELSFYWSLMFSQFTDIKRKDFGIMFLHHLVSIFLITFSYVNNMARVGTLVLCLHDS 240
Query: 241 ADALLEAAKMANYAKFQKMCDLLFVMFAVVFITTRLGIFPLWVLNTTLFESWEIVGPYPS 300
ADALLEAAKMANYAKFQKMCDLLFVMFAVVFITTRLGIFPLWVLNTTLFESWEIVGPYPS
Sbjct: 241 ADALLEAAKMANYAKFQKMCDLLFVMFAVVFITTRLGIFPLWVLNTTLFESWEIVGPYPS 300
Query: 301 WWVFNLLLLLVQGLNCFWSYLIVKIACKAVSRGKVSKDDRSDIESSSDEEDSEPPGKNPH 360
WWVFNLLLLLVQGLNCFWSYLIVKIACKAVSRGKVSKDDRSDIESSSDEEDSEPPGKNPH
Sbjct: 301 WWVFNLLLLLVQGLNCFWSYLIVKIACKAVSRGKVSKDDRSDIESSSDEEDSEPPGKNPH 360
Query: 361 TATTTNGTSGTNGYLLTGSCSMDD 384
TATTTNGTSGTNGYLLTGSCSMDD
Sbjct: 361 TATTTNGTSGTNGYLLTGSCSMDD 384
>gi|22218345 LAG1 homolog, ceramide synthase 5 [Homo sapiens]
Length = 392
Score = 535 bits (1377), Expect = e-152
Identities = 241/370 (65%), Positives = 305/370 (82%), Gaps = 1/370 (0%)
Query: 7 WFWNERFWLPHNVTWADLKNTEEAT-FPQAEDLYLAFPLAFCIFMVRLIFERFVAKPCAI 65
W W+ERFWLP NV+WADL+ + +P+ + FPLA IF VRL+FERF+AKPCA+
Sbjct: 15 WLWSERFWLPENVSWADLEGPADGYGYPRGRHILSVFPLAAGIFFVRLLFERFIAKPCAL 74
Query: 66 ALNIQANGPQIAPPNAILEKVFTAITKHPDEKRLEGLSKQLDWDVRSIQRWFRQRRNQEK 125
+ I+ +GP A PNAILEKVF +ITK+PD+KRLEGLSKQLDW+VR IQ WFR RRNQ+K
Sbjct: 75 CIGIEDSGPYQAQPNAILEKVFISITKYPDKKRLEGLSKQLDWNVRKIQCWFRHRRNQDK 134
Query: 126 PSTLTRFCESMWRFSFYLYVFTYGVRFLKKTPWLWNTRHCWYNYPYQPLTTDLHYYYILE 185
P TLT+FCESMWRF+FYL +F YG+RFL +PW W+ R CW+NYP+QPL++ L++YYI+E
Sbjct: 135 PPTLTKFCESMWRFTFYLCIFCYGIRFLWSSPWFWDIRQCWHNYPFQPLSSGLYHYYIME 194
Query: 186 LSFYWSLMFSQFTDIKRKDFGIMFLHHLVSIFLITFSYVNNMARVGTLVLCLHDSADALL 245
L+FYWSLMFSQFTDIKRKDF IMF+HHLV+I LI+FSY+NNM RVGTL++CLHD +D LL
Sbjct: 195 LAFYWSLMFSQFTDIKRKDFLIMFVHHLVTIGLISFSYINNMVRVGTLIMCLHDVSDFLL 254
Query: 246 EAAKMANYAKFQKMCDLLFVMFAVVFITTRLGIFPLWVLNTTLFESWEIVGPYPSWWVFN 305
EAAK+ANYAK+Q++CD LFV+F+ VF+ TRLGI+P W+LNTTLFESWEI+GPY SWW+ N
Sbjct: 255 EAAKLANYAKYQRLCDTLFVIFSAVFMVTRLGIYPFWILNTTLFESWEIIGPYASWWLLN 314
Query: 306 LLLLLVQGLNCFWSYLIVKIACKAVSRGKVSKDDRSDIESSSDEEDSEPPGKNPHTATTT 365
LLL +Q L+ WSYLI +IA KA+ RGKVSKDDRSD+ESSS+EED K+P ++++
Sbjct: 315 GLLLTLQLLHVIWSYLIARIALKALIRGKVSKDDRSDVESSSEEEDVTTCTKSPCDSSSS 374
Query: 366 NGTSGTNGYL 375
NG + NG++
Sbjct: 375 NGANRVNGHM 384
>gi|32455256 LAG1 longevity assurance 2 [Homo sapiens]
Length = 380
Score = 320 bits (820), Expect = 1e-87
Identities = 153/347 (44%), Positives = 225/347 (64%), Gaps = 1/347 (0%)
Query: 7 WFWNERFWLPHNVTWADLKNTEEATFPQAEDLYLAFPLAFCIFMVRLIFERFVAKPCAIA 66
+FW ER WLP N+TWADL++ + + +A DLY+ PLA +VR FE +VA P A
Sbjct: 8 YFWWERLWLPVNLTWADLEDRDGRVYAKASDLYITLPLALLFLIVRYFFELYVATPLAAL 67
Query: 67 LNIQANGPQIAPPNAILEKVFTAITKHPDEKRLEGLSKQLDWDVRSIQRWFRQRRNQEKP 126
LNI+ APPNA LE + K P + +E LS+Q R ++RWFR+RRNQ++P
Sbjct: 68 LNIKEKTRLRAPPNATLEHFYLTSGKQPKQVEVELLSRQSGLSGRQVERWFRRRRNQDRP 127
Query: 127 STLTRFCESMWRFSFYLYVFTYGVRFLKKTPWLWNTRHCWYNYPYQPLTTDLHYYYILEL 186
S L +F E+ WRF+FYL F G+ + PW ++ + W YP Q ++YY++EL
Sbjct: 128 SLLKKFREASWRFTFYLIAFIAGMAVIVDKPWFYDMKKVWEGYPIQSTIPSQYWYYMIEL 187
Query: 187 SFYWSLMFSQFTDIKRKDFGIMFLHHLVSIFLITFSYVNNMARVGTLVLCLHDSADALLE 246
SFYWSL+FS +D+KRKDF +HH+ +I LI+FS+ N R GTL++ LHDS+D LLE
Sbjct: 188 SFYWSLLFSIASDVKRKDFKEQIIHHVATIILISFSWFANYIRAGTLIMALHDSSDYLLE 247
Query: 247 AAKMANYAKFQKMCDLLFVMFAVVFITTRLGIFPLWVLNTTLFESWEIVGPYPSWWVFNL 306
+AKM NYA ++ C+ +F++FA+VFI TRL I P W+L+ TL E+ + ++ FN
Sbjct: 248 SAKMFNYAGWKNTCNNIFIVFAIVFIITRLVILPFWILHCTLVYPLELYPAFFGYYFFNS 307
Query: 307 LLLLVQGLNCFWSYLIVKIACKAVSRGKVSKDDRSDIESSSDEEDSE 353
++ ++Q L+ FW+YLI+++A K ++ GK+ +D+RSD E + E E
Sbjct: 308 MMGVLQLLHIFWAYLILRMAHKFIT-GKLVEDERSDREETESSEGEE 353
>gi|31077094 LAG1 longevity assurance 2 [Homo sapiens]
Length = 380
Score = 320 bits (820), Expect = 1e-87
Identities = 153/347 (44%), Positives = 225/347 (64%), Gaps = 1/347 (0%)
Query: 7 WFWNERFWLPHNVTWADLKNTEEATFPQAEDLYLAFPLAFCIFMVRLIFERFVAKPCAIA 66
+FW ER WLP N+TWADL++ + + +A DLY+ PLA +VR FE +VA P A
Sbjct: 8 YFWWERLWLPVNLTWADLEDRDGRVYAKASDLYITLPLALLFLIVRYFFELYVATPLAAL 67
Query: 67 LNIQANGPQIAPPNAILEKVFTAITKHPDEKRLEGLSKQLDWDVRSIQRWFRQRRNQEKP 126
LNI+ APPNA LE + K P + +E LS+Q R ++RWFR+RRNQ++P
Sbjct: 68 LNIKEKTRLRAPPNATLEHFYLTSGKQPKQVEVELLSRQSGLSGRQVERWFRRRRNQDRP 127
Query: 127 STLTRFCESMWRFSFYLYVFTYGVRFLKKTPWLWNTRHCWYNYPYQPLTTDLHYYYILEL 186
S L +F E+ WRF+FYL F G+ + PW ++ + W YP Q ++YY++EL
Sbjct: 128 SLLKKFREASWRFTFYLIAFIAGMAVIVDKPWFYDMKKVWEGYPIQSTIPSQYWYYMIEL 187
Query: 187 SFYWSLMFSQFTDIKRKDFGIMFLHHLVSIFLITFSYVNNMARVGTLVLCLHDSADALLE 246
SFYWSL+FS +D+KRKDF +HH+ +I LI+FS+ N R GTL++ LHDS+D LLE
Sbjct: 188 SFYWSLLFSIASDVKRKDFKEQIIHHVATIILISFSWFANYIRAGTLIMALHDSSDYLLE 247
Query: 247 AAKMANYAKFQKMCDLLFVMFAVVFITTRLGIFPLWVLNTTLFESWEIVGPYPSWWVFNL 306
+AKM NYA ++ C+ +F++FA+VFI TRL I P W+L+ TL E+ + ++ FN
Sbjct: 248 SAKMFNYAGWKNTCNNIFIVFAIVFIITRLVILPFWILHCTLVYPLELYPAFFGYYFFNS 307
Query: 307 LLLLVQGLNCFWSYLIVKIACKAVSRGKVSKDDRSDIESSSDEEDSE 353
++ ++Q L+ FW+YLI+++A K ++ GK+ +D+RSD E + E E
Sbjct: 308 MMGVLQLLHIFWAYLILRMAHKFIT-GKLVEDERSDREETESSEGEE 353
>gi|205360977 LAG1 homolog, ceramide synthase 4 [Homo sapiens]
Length = 394
Score = 319 bits (818), Expect = 2e-87
Identities = 154/346 (44%), Positives = 218/346 (63%)
Query: 7 WFWNERFWLPHNVTWADLKNTEEATFPQAEDLYLAFPLAFCIFMVRLIFERFVAKPCAIA 66
WFW +RFWLP NVTW +L++ + +P +DL A PLA + +RL FERF+ P +
Sbjct: 8 WFWQDRFWLPPNVTWTELEDRDGRVYPHPQDLLAALPLALVLLAMRLAFERFIGLPLSRW 67
Query: 67 LNIQANGPQIAPPNAILEKVFTAITKHPDEKRLEGLSKQLDWDVRSIQRWFRQRRNQEKP 126
L ++ + PNA LEK F P E +L L+ Q ++ QRWFR+RRNQ++P
Sbjct: 68 LGVRDQTRRQVKPNATLEKHFLTEGHRPKEPQLSLLAAQCGLTLQQTQRWFRRRRNQDRP 127
Query: 127 STLTRFCESMWRFSFYLYVFTYGVRFLKKTPWLWNTRHCWYNYPYQPLTTDLHYYYILEL 186
+FCE+ WRF FYL F G+ L WLW CW YP Q L L+++Y+LEL
Sbjct: 128 QLTKKFCEASWRFLFYLSSFVGGLSVLYHESWLWAPVMCWDRYPNQTLKPSLYWWYLLEL 187
Query: 187 SFYWSLMFSQFTDIKRKDFGIMFLHHLVSIFLITFSYVNNMARVGTLVLCLHDSADALLE 246
FY SL+ D+KRKDF +HH V++ L+TFSY N+ R+G+LVL LHDS+D LLE
Sbjct: 188 GFYLSLLIRLPFDVKRKDFKEQVIHHFVAVILMTFSYSANLLRIGSLVLLLHDSSDYLLE 247
Query: 247 AAKMANYAKFQKMCDLLFVMFAVVFITTRLGIFPLWVLNTTLFESWEIVGPYPSWWVFNL 306
A KM NY ++Q++CD LF++F+ VF TRL +FP +L TT +ES GP+ ++ FN
Sbjct: 248 ACKMVNYMQYQQVCDALFLIFSFVFFYTRLVLFPTQILYTTYYESISNRGPFFGYYFFNG 307
Query: 307 LLLLVQGLNCFWSYLIVKIACKAVSRGKVSKDDRSDIESSSDEEDS 352
LL+L+Q L+ FWS LI+++ + +G++ KD RSD+E S E++
Sbjct: 308 LLMLLQLLHVFWSCLILRMLYSFMKKGQMEKDIRSDVEESDSSEEA 353
>gi|116235446 LAG1 longevity assurance homolog 3 [Homo sapiens]
Length = 383
Score = 298 bits (764), Expect = 4e-81
Identities = 145/347 (41%), Positives = 216/347 (62%), Gaps = 2/347 (0%)
Query: 7 WFWNERFWLPHNVTWADLKNTEEATFPQAEDLYLAFPLAFCIFMVRLIFERFVAKPCAIA 66
WFW ERFWLP + W+DL++ + F + LY+ P AF + ++R +FE+FVA P A +
Sbjct: 8 WFWLERFWLPPTIKWSDLEDHDGLVFVKPSHLYVTIPYAFLLLIIRRVFEKFVASPLAKS 67
Query: 67 LNIQANGPQIAPPNAILEKVFTAITKHPDEKRLEGLSKQLDWDVRSIQRWFRQRRNQEKP 126
I+ ++ P N +LE F T+ P + + GL+K+ + R ++RWFR RRNQE+P
Sbjct: 68 FGIKETVRKVTP-NTVLENFFKHSTRQPLQTDIYGLAKKCNLTERQVERWFRSRRNQERP 126
Query: 127 STLTRFCESMWRFSFYLYVFTYGVRFLKKTPWLWNTRHCWYNYPYQPLTTDLHYYYILEL 186
S L +F E+ WRF+FYL + G+ FL PWL++ W YP QPL ++YYILE+
Sbjct: 127 SRLKKFQEACWRFAFYLMITVAGIAFLYDKPWLYDLWEVWNGYPKQPLLPSQYWYYILEM 186
Query: 187 SFYWSLMFSQFTDIKRKDFGIMFLHHLVSIFLITFSYVNNMARVGTLVLCLHDSADALLE 246
SFYWSL+F D+KRKDF +HHL +I L++FS+ N R GTLV+ +HD AD LE
Sbjct: 187 SFYWSLLFRLGFDVKRKDFLAHIIHHLAAISLMSFSWCANYIRSGTLVMIVHDVADIWLE 246
Query: 247 AAKMANYAKFQKMCDLLFVMFAVVFITTRLGIFPLWVLNTTLFESWEIVGPYPSWWVFNL 306
+AKM +YA + + C+ LF +F+ +F +RL +FP W+L TL + P+ S+ NL
Sbjct: 247 SAKMFSYAGWTQTCNTLFFIFSTIFFISRLIVFPFWILYCTLILPMYHLEPFFSYIFLNL 306
Query: 307 LLLLVQGLNCFWSYLIVKIACKAVSRGKVSKDDRSDIESSSDEEDSE 353
L+++Q L+ +W Y I+K+ + + K +D RSD E +EE+ E
Sbjct: 307 QLMILQVLHLYWGYYILKMLNRCIFM-KSIQDVRSDDEDYEEEEEEE 352
>gi|38176296 LAG1 homolog, ceramide synthase 1 isoform 2 [Homo
sapiens]
Length = 337
Score = 100 bits (249), Expect = 2e-21
Identities = 84/248 (33%), Positives = 119/248 (47%), Gaps = 19/248 (7%)
Query: 125 KPSTLTRFCESMWRFSFYLYVFTYGVRFLKKT--PWLWNTRHCWYNY-PYQPLTTDLHYY 181
+P + ES W+F FYL ++Y L T P+ + +Y++ P + D+
Sbjct: 92 QPRDAAKMPESAWKFLFYLGSWSYSAYLLFGTDYPFFHDPPSVFYDWTPGMAVPRDIAAA 151
Query: 182 YILELSFYW-SLMFSQFTDIKRKDFGIMFLHHLVSIFLITFSYVNNMARVGTLVLCLHDS 240
Y+L+ SFY S+ + + D RKD +M LHH+V++ LI SY VG LVL LHD
Sbjct: 152 YLLQGSFYGHSIYATLYMDTWRKDSVVMLLHHVVTLILIVSSYAFRYHNVGILVLFLHDI 211
Query: 241 ADALLEAAKMANYAKFQ---------KMCDLLFVMFAVVFITTRLGIFPLWVLNTTLFES 291
+D LE K+ Y K + DL + F + RL FPL VL T S
Sbjct: 212 SDVQLEFTKLNIYFKSRGGSYHRLHALAADLGCLSFGFSWFWFRLYWFPLKVLYATSHCS 271
Query: 292 WEIVGPYPSWWVFNLLLLLVQGLNCFWSYLIVKIACKAVSRGKVS--KDDRSDIESSSDE 349
V P ++ FN LLLL+ +N +W IV A K ++ G+V KD R E + E
Sbjct: 272 LRTVPDIPFYFFFNALLLLLTLMNLYWFLYIVAFAAKVLT-GQVHELKDLR---EYDTAE 327
Query: 350 EDSEPPGK 357
S P K
Sbjct: 328 AQSLKPSK 335
>gi|11641421 LAG1 homolog, ceramide synthase 1 isoform 1 [Homo
sapiens]
Length = 350
Score = 100 bits (249), Expect = 2e-21
Identities = 84/248 (33%), Positives = 119/248 (47%), Gaps = 19/248 (7%)
Query: 125 KPSTLTRFCESMWRFSFYLYVFTYGVRFLKKT--PWLWNTRHCWYNY-PYQPLTTDLHYY 181
+P + ES W+F FYL ++Y L T P+ + +Y++ P + D+
Sbjct: 92 QPRDAAKMPESAWKFLFYLGSWSYSAYLLFGTDYPFFHDPPSVFYDWTPGMAVPRDIAAA 151
Query: 182 YILELSFYW-SLMFSQFTDIKRKDFGIMFLHHLVSIFLITFSYVNNMARVGTLVLCLHDS 240
Y+L+ SFY S+ + + D RKD +M LHH+V++ LI SY VG LVL LHD
Sbjct: 152 YLLQGSFYGHSIYATLYMDTWRKDSVVMLLHHVVTLILIVSSYAFRYHNVGILVLFLHDI 211
Query: 241 ADALLEAAKMANYAKFQ---------KMCDLLFVMFAVVFITTRLGIFPLWVLNTTLFES 291
+D LE K+ Y K + DL + F + RL FPL VL T S
Sbjct: 212 SDVQLEFTKLNIYFKSRGGSYHRLHALAADLGCLSFGFSWFWFRLYWFPLKVLYATSHCS 271
Query: 292 WEIVGPYPSWWVFNLLLLLVQGLNCFWSYLIVKIACKAVSRGKVS--KDDRSDIESSSDE 349
V P ++ FN LLLL+ +N +W IV A K ++ G+V KD R E + E
Sbjct: 272 LRTVPDIPFYFFFNALLLLLTLMNLYWFLYIVAFAAKVLT-GQVHELKDLR---EYDTAE 327
Query: 350 EDSEPPGK 357
S P K
Sbjct: 328 AQSLKPSK 335
>gi|7657655 translocation associated membrane protein 1 [Homo
sapiens]
Length = 374
Score = 57.4 bits (137), Expect = 2e-08
Identities = 44/169 (26%), Positives = 84/169 (49%), Gaps = 9/169 (5%)
Query: 120 RRNQEKPSTLTRFCESMWRFSFYLYVFTYGVRFLKKTPWLWNTRHCWYNYPYQPLTTDLH 179
RR + ++F ES +FYL+ +G L ++ + W YP+ +T +
Sbjct: 107 RRMHFSKTKHSKFNESGQLSAFYLFACVWGTFILISENYISDPTILWRAYPHNLMTFQMK 166
Query: 180 YYYILELSFYWSLMFSQ--FTDIKRKDFGIMFLHHLVSIFLITFSYVNNMARVGTLVLCL 237
++YI +L+ YW F + F K++D ++ + +F I +Y+ N+ +G ++L L
Sbjct: 167 FFYISQLA-YWLHAFPELYFQKTKKEDIPRQLVYIGLYLFHIAGAYLLNLNHLGLVLLVL 225
Query: 238 HDSADALLEAAKMANYA--KFQKMCDLLFVMFAVVFITTRLGIFPLWVL 284
H + L +++ ++ K+QK F ++AV+F+ RL L VL
Sbjct: 226 HYFVEFLFHISRLFYFSNEKYQKG----FSLWAVLFVLGRLLTLILSVL 270
>gi|6912450 translocation-associated membrane protein 2 [Homo
sapiens]
Length = 370
Score = 54.3 bits (129), Expect = 2e-07
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 23/207 (11%)
Query: 82 ILEKVFTAITKHP--DEKRLEGLSKQLDWDVRSIQRWFRQRRNQEKPSTLTRFCESMWRF 139
IL +F I H E L+ +SK+L + + + N+ + F +W
Sbjct: 78 ILFYIFITIILHAVVQEYILDKISKRLH-----LSKVKHSKFNESGQLVVFHFTSVIW-- 130
Query: 140 SFYLYVFTYGVRFLKKTPWLWNTRHCWYNYPYQPLTTDLHYYYILELSFYW--SLMFSQF 197
FY+ V T G +L N R W +YP+ L + ++Y+ +L+ YW +L F
Sbjct: 131 CFYVVV-TEG--------YLTNPRSLWEDYPHVHLPFQVKFFYLCQLA-YWLHALPELYF 180
Query: 198 TDIKRKDFGIMFLHHLVSIFLITFSYVNNMARVGTLVLCLHDSADALLEAAKMANYAKFQ 257
+++++ + + + I +Y+ N++R+G ++L L S + L A++ +A
Sbjct: 181 QKVRKEEIPRQLQYICLYLVHIAGAYLLNLSRLGLILLLLQYSTEFLFHTARLFYFA--D 238
Query: 258 KMCDLLFVMFAVVFITTRLGIFPLWVL 284
+ + LF +A VF TRL I L VL
Sbjct: 239 ENNEKLFSAWAAVFGVTRLFILTLAVL 265
>gi|19743884 regulatory factor X3 isoform b [Homo sapiens]
Length = 749
Score = 31.6 bits (70), Expect = 1.3
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 329 AVSRGKVSKDDRSDIESSSDEE---DSEPPGKNPHT 361
AVS G + KD+ S++ES DEE SEP K T
Sbjct: 662 AVSPGNLDKDEGSEVESEMDEELDDSSEPQAKREKT 697
>gi|224282187 HOP homeobox isoform a [Homo sapiens]
Length = 91
Score = 30.8 bits (68), Expect = 2.1
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 82 ILEKVFTAITKHPDEKRLEGLSKQLDWDVRSIQRWFRQR 120
ILE F + KHPD L ++ + Q+WF+QR
Sbjct: 34 ILEYNFNKVDKHPDSTTLCLIAAEAGLSEEETQKWFKQR 72
>gi|224451023 HOP homeobox isoform b [Homo sapiens]
Length = 73
Score = 30.8 bits (68), Expect = 2.1
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 82 ILEKVFTAITKHPDEKRLEGLSKQLDWDVRSIQRWFRQR 120
ILE F + KHPD L ++ + Q+WF+QR
Sbjct: 16 ILEYNFNKVDKHPDSTTLCLIAAEAGLSEEETQKWFKQR 54
>gi|21264589 HOP homeobox isoform b [Homo sapiens]
Length = 73
Score = 30.8 bits (68), Expect = 2.1
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 82 ILEKVFTAITKHPDEKRLEGLSKQLDWDVRSIQRWFRQR 120
ILE F + KHPD L ++ + Q+WF+QR
Sbjct: 16 ILEYNFNKVDKHPDSTTLCLIAAEAGLSEEETQKWFKQR 54
>gi|21264587 HOP homeobox isoform b [Homo sapiens]
Length = 73
Score = 30.8 bits (68), Expect = 2.1
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 82 ILEKVFTAITKHPDEKRLEGLSKQLDWDVRSIQRWFRQR 120
ILE F + KHPD L ++ + Q+WF+QR
Sbjct: 16 ILEYNFNKVDKHPDSTTLCLIAAEAGLSEEETQKWFKQR 54
>gi|24308434 glucose-6-phosphatase catalytic subunit 3 [Homo
sapiens]
Length = 346
Score = 30.8 bits (68), Expect = 2.1
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Query: 263 LFVMFAVVFITTRLGIFPLWVLNTT----LFESWEIVGPYPSWWV 303
LF A + + R+GI LW+ T L W + G P WWV
Sbjct: 40 LFYFPAAYYASRRVGIAVLWISLITEWLNLIFKWFLFGDRPFWWV 84
>gi|14149865 family with sequence similarity 176, member A [Homo
sapiens]
Length = 152
Score = 29.6 bits (65), Expect = 4.8
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 313 GLNCFWSYLIVKIACKAVSRGKVSKDDRSDIESSSDEEDSE 353
GL + L+++I+C R + K D ESSSD DSE
Sbjct: 45 GLVLTLAALVIRISCHTDCRRRPGKKFLQDRESSSDSSDSE 85
>gi|205277349 family with sequence similarity 176, member A [Homo
sapiens]
Length = 152
Score = 29.6 bits (65), Expect = 4.8
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 313 GLNCFWSYLIVKIACKAVSRGKVSKDDRSDIESSSDEEDSE 353
GL + L+++I+C R + K D ESSSD DSE
Sbjct: 45 GLVLTLAALVIRISCHTDCRRRPGKKFLQDRESSSDSSDSE 85
>gi|239756689 PREDICTED: WD repeat domain 81 [Homo sapiens]
Length = 1941
Score = 29.3 bits (64), Expect = 6.2
Identities = 16/62 (25%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 298 YPSWWVFNLLLLLVQGLNCFWSYLIVKIACKAVSRGKVSKDDRSDIESSSDEEDSEPPGK 357
Y +V L++ L GL F ++L+ + + ++ + S+++ D+ +++EE+S PG
Sbjct: 983 YTDCFVAQLMVRL--GLQAFLTHLLPHVL-QVLAGAEASQEESKDLAGAAEEEESGLPGA 1039
Query: 358 NP 359
P
Sbjct: 1040 GP 1041
>gi|239751186 PREDICTED: WD repeat domain 81 [Homo sapiens]
Length = 2240
Score = 29.3 bits (64), Expect = 6.2
Identities = 16/62 (25%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 298 YPSWWVFNLLLLLVQGLNCFWSYLIVKIACKAVSRGKVSKDDRSDIESSSDEEDSEPPGK 357
Y +V L++ L GL F ++L+ + + ++ + S+++ D+ +++EE+S PG
Sbjct: 1282 YTDCFVAQLMVRL--GLQAFLTHLLPHVL-QVLAGAEASQEESKDLAGAAEEEESGLPGA 1338
Query: 358 NP 359
P
Sbjct: 1339 GP 1340
>gi|239745674 PREDICTED: WD repeat domain 81 [Homo sapiens]
Length = 1941
Score = 29.3 bits (64), Expect = 6.2
Identities = 16/62 (25%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 298 YPSWWVFNLLLLLVQGLNCFWSYLIVKIACKAVSRGKVSKDDRSDIESSSDEEDSEPPGK 357
Y +V L++ L GL F ++L+ + + ++ + S+++ D+ +++EE+S PG
Sbjct: 983 YTDCFVAQLMVRL--GLQAFLTHLLPHVL-QVLAGAEASQEESKDLAGAAEEEESGLPGA 1039
Query: 358 NP 359
P
Sbjct: 1040 GP 1041
>gi|30410785 LIM homeobox protein 1 [Homo sapiens]
Length = 406
Score = 29.3 bits (64), Expect = 6.2
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 67 LNIQANGPQIAPPNAILE--KVFTAITKHPDEKRLEGLSKQLDWDVRSIQRWFRQRRNQE 124
L + GP+ LE K A T P E L+++ ++R IQ WF+ RR++E
Sbjct: 176 LGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKE 235
Query: 125 K 125
+
Sbjct: 236 R 236
>gi|30023847 LIM homeobox protein 3 isoform a [Homo sapiens]
Length = 397
Score = 28.9 bits (63), Expect = 8.1
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 83 LEKVFTAITKHPDEKR--LEGLSKQLDWDVRSIQRWFRQRRNQEK 125
LE + +A P R E LS + D+R +Q WF+ RR +EK
Sbjct: 169 LETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEK 213
>gi|7657303 LIM homeobox protein 3 isoform b [Homo sapiens]
Length = 402
Score = 28.9 bits (63), Expect = 8.1
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 83 LEKVFTAITKHPDEKR--LEGLSKQLDWDVRSIQRWFRQRRNQEK 125
LE + +A P R E LS + D+R +Q WF+ RR +EK
Sbjct: 174 LETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEK 218
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.326 0.139 0.462
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,950,288
Number of Sequences: 37866
Number of extensions: 617804
Number of successful extensions: 2750
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2723
Number of HSP's gapped (non-prelim): 26
length of query: 384
length of database: 18,247,518
effective HSP length: 104
effective length of query: 280
effective length of database: 14,309,454
effective search space: 4006647120
effective search space used: 4006647120
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.