LASS1 1816

Name: LASS1	Sequence: fasta or formatted (350aa)		NCBI GI: 11641421
Description: LAG1 homolog, ceramide synthase 1 isoform 1		Referenced in: Sphingomyelin, Ceramides, and Glycolipids
Other entries for this name: alt prot [337aa] LAG1 homolog, ceramide synthase 1 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.0 42 3 C cysteine 1.7 6 2 D aspartate 4.3 15 1 E glutamate 2.6 9 1 F phenylalanine 6.9 24 3 G glycine 6.6 23 2 H histidine 3.4 12 2 I isoleucine 2.6 9 1 K lysine 4.0 14 1 L leucine 15.1 53 5 M methionine 2.0 7 1 N asparagine 1.4 5 1 P proline 5.7 20 2 Q glutamine 2.0 7 1 R arginine 5.4 19 2 S serine 6.3 22 2 T threonine 4.3 15 1 V valine 4.9 17 2 W tryptophan 3.1 11 1 Y tyrosine 5.7 20 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LAG1 homolog, ceramide synthase 1 isoform 1 LASS1 0.963 LAG1 homolog, ceramide synthase 1 isoform 2 LASS4 0.121 LAG1 homolog, ceramide synthase 4 LASS6 0.107 longevity assurance homolog 6 LASS2 0.101 LAG1 longevity assurance 2 LASS2 0.101 LAG1 longevity assurance 2 LASS5 0.092 LAG1 homolog, ceramide synthase 5 LASS3 0.088 LAG1 longevity assurance homolog 3 TRAM2 0.024 translocation-associated membrane protein 2 TRAM1L1 0.009 translocation associated membrane protein 1-like 1 ... CSHL1 0.007 chorionic somatomammotropin hormone-like 1 isoform 1... LOC100292745 0.007 PREDICTED: hypothetical protein LOC100290074 0.007 PREDICTED: hypothetical protein XP_002346855 LOC100287034 0.007 PREDICTED: hypothetical protein XP_002342693 GABRD 0.007 gamma-aminobutyric acid (GABA) A receptor, delta pre... KAZALD1 0.007 Kazal-type serine peptidase inhibitor domain 1 precu... FZD5 0.006 frizzled 5 precursor LOC100133915 0.006 PREDICTED: hypothetical protein LIMD1 0.006 LIM domains containing 1 DMRTA2 0.006 DMRT-like family A2 POMT2 0.006 protein-O-mannosyltransferase 2 DENND2C 0.006 DENN/MADD domain containing 2C THNSL2 0.006 threonine synthase-like 2 LOC100292157 0.004 PREDICTED: hypothetical protein LOC100290926 0.004 PREDICTED: hypothetical protein XP_002347568 LOC100288995 0.004 PREDICTED: hypothetical protein XP_002343379 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.