Guide to the Human Genome
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Name: FAM176A Sequence: fasta or formatted (152aa) NCBI GI: 205277349
Description:

family with sequence similarity 176, member A

Not currently referenced in the text

Other entries for this name:
alt mRNA {152aa} family with sequence similarity 176, member A
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9          9           2
 C cysteine            2.0          3           1
 D aspartate           4.6          7           1
 E glutamate          10.5         16           2
 F phenylalanine       3.3          5           1
 G glycine             3.9          6           1
 H histidine           2.6          4           1
 I isoleucine          4.6          7           2
 K lysine              2.0          3           2
 L leucine            10.5         16           2
 M methionine          2.0          3           1
 N asparagine          3.9          6           1
 P proline             3.9          6           1
 Q glutamine           2.0          3           1
 R arginine           12.5         19           3
 S serine             11.8         18           3
 T threonine           3.9          6           1
 V valine              6.6         10           1
 W tryptophan          0.7          1           1
 Y tyrosine            2.6          4           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   family with sequence similarity 176, member A [Homo... 
FAM176A               1.000   family with sequence similarity 176, member A 
FAM176B               0.347   hypothetical protein LOC55194 
C21orf63              0.256   hypothetical protein LOC59271 
C1orf107              0.029   digestive-organ expansion factor homolog 
SMC1A                 0.025   structural maintenance of chromosomes 1A 
PPIG                  0.025   peptidylprolyl isomerase G 
KIAA0513              0.025   hypothetical protein LOC9764 
CHD9                  0.022   chromodomain helicase DNA binding protein 9 
PPRC1                 0.022   peroxisome proliferator-activated receptor gamma, co...
MAP7                  0.018   microtubule-associated protein 7 
HDGF2                 0.018   hepatoma-derived growth factor-related protein 2 iso...
HDGF2                 0.018   hepatoma-derived growth factor-related protein 2 iso...
BIRC6                 0.018   baculoviral IAP repeat-containing 6 
NKTR                  0.018   natural killer-tumor recognition sequence 
DNAJC17               0.018   DnaJ (Hsp40) homolog, subfamily C, member 17 
KRI1                  0.018   KRI1 homolog 
LASS6                 0.018   longevity assurance homolog 6 
RBM25                 0.014   RNA binding motif protein 25 
FGFR3                 0.014   fibroblast growth factor receptor 3 isoform 3 precu...
FGFR3                 0.014   fibroblast growth factor receptor 3 isoform 2 precur...
FGFR3                 0.014   fibroblast growth factor receptor 3 isoform 1 precurs...
PSIP1                 0.014   PC4 and SFRS1 interacting protein 1 isoform 2 [Homo...
PSIP1                 0.014   PC4 and SFRS1 interacting protein 1 isoform 1 [Homo...
PSIP1                 0.014   PC4 and SFRS1 interacting protein 1 isoform 2 
TCHH                  0.014   trichohyalin 
UBTFL1                0.011   upstream binding transcription factor, RNA polymera...
KIAA1026              0.011   kazrin isoform E 
KIAA1026              0.011   kazrin isoform C 
KIAA1026              0.011   kazrin isoform B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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