Guide to the Human Genome
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Name: DIP2C Sequence: fasta or formatted (1556aa) NCBI GI: 44888818
Description:

DIP2 disco-interacting protein 2 homolog C

Referenced in:

Additional Brain Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3        114           4
 C cysteine            2.6         40           1
 D aspartate           5.0         78           2
 E glutamate           5.2         81           2
 F phenylalanine       2.4         38           2
 G glycine             7.0        109           2
 H histidine           2.8         44           1
 I isoleucine          4.7         73           3
 K lysine              4.2         66           2
 L leucine            10.0        155           2
 M methionine          2.8         44           2
 N asparagine          2.5         39           2
 P proline             6.4        100           2
 Q glutamine           4.1         64           2
 R arginine            5.8         91           3
 S serine              7.9        123           4
 T threonine           6.5        101           2
 V valine              8.7        136           5
 W tryptophan          1.2         19           1
 Y tyrosine            2.6         41           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DIP2 disco-interacting protein 2 homolog C 
DIP2A                 0.763   disco-interacting protein 2A isoform a 
DIP2A                 0.758   disco-interacting protein 2A isoform g 
DIP2B                 0.746   DIP2 disco-interacting protein 2 homolog B 
DIP2A                 0.504   disco-interacting protein 2A isoform e 
DIP2A                 0.377   disco-interacting protein 2A isoform b 
DIP2A                 0.355   disco-interacting protein 2A isoform c 
DIP2A                 0.339   disco-interacting protein 2A isoform f 
DIP2A                 0.333   disco-interacting protein 2A isoform d 
TNRC18                0.005   trinucleotide repeat containing 18 
ZNF385B               0.004   zinc finger protein 385B isoform 3 
ZNF385B               0.004   zinc finger protein 385B isoform 2 
ZNF385B               0.004   zinc finger protein 385B isoform 1 
DMKN                  0.004   dermokine isoform 3 precursor 
MUC21                 0.004   mucin 21 
RNF6                  0.004   ring finger protein 6 
MUC5AC                0.004   mucin 5AC 
RP1L1                 0.004   retinitis pigmentosa 1-like 1 
RNF6                  0.004   ring finger protein 6 
RNF6                  0.004   ring finger protein 6 
ATAD2B                0.004   ATPase family, AAA domain containing 2B 
LEF1                  0.003   lymphoid enhancer-binding factor 1 isoform 3 
LEF1                  0.003   lymphoid enhancer-binding factor 1 isoform 2 
THRAP3                0.003   thyroid hormone receptor associated protein 3 [Homo...
LOC100134138          0.003   PREDICTED: similar to mucin, partial 
GNPTAB                0.003   N-acetylglucosamine-1-phosphate transferase 
SH3PXD2B              0.003   SH3 and PX domains 2B 
SETD1A                0.003   SET domain containing 1A 
ACSBG1                0.003   lipidosin 
GTF2F1                0.003   general transcription factor IIF, polypeptide 1, 74...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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