SCN3A 2868

Name: SCN3A	Sequence: fasta or formatted (1951aa)		NCBI GI: 126362947
Description: sodium channel, voltage-gated, type III, alpha isoform 2		Referenced in: Sodium Channels
Other entries for this name: alt prot [2000aa] sodium channel, voltage-gated, type III, alpha isoform 1 alt prot [1951aa] sodium channel, voltage-gated, type III, alpha isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 111 3 C cysteine 1.8 36 2 D aspartate 5.1 100 3 E glutamate 6.6 129 2 F phenylalanine 7.1 139 3 G glycine 5.5 108 2 H histidine 0.9 17 1 I isoleucine 7.0 137 3 K lysine 6.3 123 3 L leucine 10.1 198 3 M methionine 3.8 74 2 N asparagine 5.3 103 2 P proline 3.5 69 2 Q glutamine 2.8 55 2 R arginine 4.2 81 2 S serine 7.7 151 3 T threonine 5.1 99 3 V valine 6.9 135 3 W tryptophan 1.4 28 2 Y tyrosine 3.0 58 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sodium channel, voltage-gated, type III, alpha isof... SCN3A 0.999 sodium channel, voltage-gated, type III, alpha isof... SCN3A 0.994 sodium channel, voltage-gated, type III, alpha isof... SCN2A 0.873 sodium channel, voltage-gated, type II, alpha isofor... SCN2A 0.873 sodium channel, voltage-gated, type II, alpha isofor... SCN2A 0.872 sodium channel, voltage-gated, type II, alpha isofor... SCN1A 0.838 sodium channel, voltage-gated, type I, alpha SCN9A 0.755 sodium channel, voltage-gated, type IX, alpha SCN8A 0.729 sodium channel, voltage gated, type VIII, alpha [Homo... SCN5A 0.614 voltage-gated sodium channel type V alpha isoform f... SCN5A 0.610 voltage-gated sodium channel type V alpha isoform b ... SCN5A 0.610 voltage-gated sodium channel type V alpha isoform a ... SCN5A 0.608 voltage-gated sodium channel type V alpha isoform c... SCN5A 0.596 voltage-gated sodium channel type V alpha isoform d... SCN5A 0.591 voltage-gated sodium channel type V alpha isoform e... SCN10A 0.539 sodium channel, voltage-gated, type X, alpha SCN4A 0.464 voltage-gated sodium channel type 4 alpha SCN7A 0.331 sodium channel, voltage-gated, type VII, alpha [Hom... SCN11A 0.328 sodium channel, voltage-gated, type XI, alpha [Homo... LOC100294386 0.255 PREDICTED: similar to sodium channel, voltage-gated... CACNA1I 0.082 calcium channel, voltage-dependent, T type, alpha 1I... CACNA1I 0.082 calcium channel, voltage-dependent, T type, alpha 1I... CACNA1H 0.081 calcium channel, voltage-dependent, T type, alpha 1H... CACNA1D 0.080 calcium channel, voltage-dependent, L type, alpha 1... CACNA1H 0.080 calcium channel, voltage-dependent, T type, alpha 1H... CACNA1G 0.080 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.080 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.080 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.080 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.080 voltage-dependent calcium channel alpha 1G subunit i... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.