SCN10A 820

Name: SCN10A	Sequence: fasta or formatted (1956aa)		NCBI GI: 110835710
Description: sodium channel, voltage-gated, type X, alpha		Referenced in: Sodium Channels
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 120 2 C cysteine 2.0 40 2 D aspartate 5.1 99 2 E glutamate 6.1 119 3 F phenylalanine 6.9 135 2 G glycine 5.6 109 3 H histidine 1.5 30 2 I isoleucine 7.0 136 3 K lysine 5.1 100 3 L leucine 10.6 207 3 M methionine 2.7 53 2 N asparagine 4.4 86 2 P proline 5.1 99 3 Q glutamine 3.3 64 2 R arginine 4.6 89 2 S serine 7.6 149 3 T threonine 5.8 113 2 V valine 6.5 128 3 W tryptophan 1.6 32 1 Y tyrosine 2.5 48 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sodium channel, voltage-gated, type X, alpha SCN5A 0.602 voltage-gated sodium channel type V alpha isoform c... SCN5A 0.601 voltage-gated sodium channel type V alpha isoform a ... SCN5A 0.601 voltage-gated sodium channel type V alpha isoform b ... SCN5A 0.596 voltage-gated sodium channel type V alpha isoform f... SCN5A 0.590 voltage-gated sodium channel type V alpha isoform d... SCN5A 0.584 voltage-gated sodium channel type V alpha isoform e... SCN2A 0.535 sodium channel, voltage-gated, type II, alpha isofor... SCN2A 0.535 sodium channel, voltage-gated, type II, alpha isofor... SCN2A 0.535 sodium channel, voltage-gated, type II, alpha isofor... SCN3A 0.533 sodium channel, voltage-gated, type III, alpha isof... SCN3A 0.533 sodium channel, voltage-gated, type III, alpha isof... SCN3A 0.532 sodium channel, voltage-gated, type III, alpha isof... SCN1A 0.530 sodium channel, voltage-gated, type I, alpha SCN9A 0.526 sodium channel, voltage-gated, type IX, alpha SCN8A 0.520 sodium channel, voltage gated, type VIII, alpha [Homo... SCN4A 0.392 voltage-gated sodium channel type 4 alpha SCN11A 0.334 sodium channel, voltage-gated, type XI, alpha [Homo... SCN7A 0.260 sodium channel, voltage-gated, type VII, alpha [Hom... LOC100294386 0.249 PREDICTED: similar to sodium channel, voltage-gated... CACNA1I 0.127 calcium channel, voltage-dependent, T type, alpha 1I... CACNA1G 0.103 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.103 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.103 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.102 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.102 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.102 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.102 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.102 voltage-dependent calcium channel alpha 1G subunit i... CACNA1H 0.102 calcium channel, voltage-dependent, T type, alpha 1H... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.