SCN11A 1616

Name: SCN11A	Sequence: fasta or formatted (1791aa)		NCBI GI: 115583667
Description: sodium channel, voltage-gated, type XI, alpha		Referenced in: Sodium Channels
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 93 2 C cysteine 2.8 51 2 D aspartate 4.3 77 2 E glutamate 5.9 106 3 F phenylalanine 7.3 131 3 G glycine 4.7 85 2 H histidine 1.6 28 2 I isoleucine 8.5 152 4 K lysine 6.7 120 3 L leucine 10.6 190 3 M methionine 3.0 54 2 N asparagine 4.8 86 2 P proline 4.2 75 2 Q glutamine 4.0 71 3 R arginine 4.2 76 2 S serine 7.1 128 3 T threonine 4.5 81 3 V valine 6.4 114 3 W tryptophan 1.8 32 2 Y tyrosine 2.3 41 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sodium channel, voltage-gated, type XI, alpha [Homo... SCN4A 0.440 voltage-gated sodium channel type 4 alpha SCN5A 0.376 voltage-gated sodium channel type V alpha isoform a ... SCN5A 0.376 voltage-gated sodium channel type V alpha isoform b ... SCN5A 0.376 voltage-gated sodium channel type V alpha isoform c... SCN5A 0.375 voltage-gated sodium channel type V alpha isoform f... SCN5A 0.365 voltage-gated sodium channel type V alpha isoform d... SCN10A 0.364 sodium channel, voltage-gated, type X, alpha SCN5A 0.359 voltage-gated sodium channel type V alpha isoform e... SCN2A 0.356 sodium channel, voltage-gated, type II, alpha isofor... SCN2A 0.356 sodium channel, voltage-gated, type II, alpha isofor... SCN2A 0.356 sodium channel, voltage-gated, type II, alpha isofor... SCN9A 0.356 sodium channel, voltage-gated, type IX, alpha SCN3A 0.353 sodium channel, voltage-gated, type III, alpha isof... SCN3A 0.353 sodium channel, voltage-gated, type III, alpha isof... SCN3A 0.353 sodium channel, voltage-gated, type III, alpha isof... SCN8A 0.350 sodium channel, voltage gated, type VIII, alpha [Homo... SCN1A 0.349 sodium channel, voltage-gated, type I, alpha SCN7A 0.317 sodium channel, voltage-gated, type VII, alpha [Hom... LOC100294386 0.211 PREDICTED: similar to sodium channel, voltage-gated... CACNA1I 0.092 calcium channel, voltage-dependent, T type, alpha 1I... CACNA1I 0.092 calcium channel, voltage-dependent, T type, alpha 1I... CACNA1H 0.091 calcium channel, voltage-dependent, T type, alpha 1H... CACNA1G 0.091 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.091 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.091 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.091 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.091 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.091 voltage-dependent calcium channel alpha 1G subunit i... CACNA1G 0.091 voltage-dependent calcium channel alpha 1G subunit i... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.