Guide to the Human Genome
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Name: NOXA1 Sequence: fasta or formatted (483aa) NCBI GI: 41393187
Description:

NADPH oxidase activator 1

Referenced in:

Superoxide Pathway
Tetratricopeptide Domains

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.8         62           3
 C cysteine            2.5         12           1
 D aspartate           5.8         28           2
 E glutamate           4.8         23           3
 F phenylalanine       3.1         15           2
 G glycine            11.2         54           2
 H histidine           2.9         14           1
 I isoleucine          1.2          6           1
 K lysine              1.7          8           1
 L leucine            10.6         51           2
 M methionine          1.2          6           1
 N asparagine          1.0          5           1
 P proline             8.3         40           2
 Q glutamine           8.3         40           2
 R arginine            7.0         34           2
 S serine              5.0         24           2
 T threonine           2.5         12           1
 V valine              6.8         33           2
 W tryptophan          2.3         11           1
 Y tyrosine            1.0          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NADPH oxidase activator 1 
NCF2                  0.175   neutrophil cytosolic factor 2 
NCF2                  0.175   neutrophil cytosolic factor 2 
MAP3K9                0.031   mitogen-activated protein kinase kinase kinase 9 [Ho...
C1orf113              0.029   SH3 domain-containing protein C1orf113 isoform 1 [H...
C1orf113              0.029   SH3 domain-containing protein C1orf113 isoform 2 [H...
KIAA1804              0.027   mixed lineage kinase 4 
HCLS1                 0.026   hematopoietic cell-specific Lyn substrate 1 
SORBS2                0.025   sorbin and SH3 domain containing 2 isoform 8 
SORBS2                0.025   sorbin and SH3 domain containing 2 isoform 7 
SORBS2                0.025   sorbin and SH3 domain containing 2 isoform 6 
SORBS2                0.025   sorbin and SH3 domain containing 2 isoform 5 
SORBS2                0.025   sorbin and SH3 domain containing 2 isoform 4 
SORBS2                0.025   sorbin and SH3 domain containing 2 isoform 3 
SORBS2                0.025   sorbin and SH3 domain containing 2 isoform 2 
SORBS2                0.025   sorbin and SH3 domain containing 2 isoform 1 
GRAP                  0.024   GRB2-related adaptor protein 
SH3RF2                0.023   SH3 domain containing ring finger 2 
MAP3K10               0.023   mitogen-activated protein kinase kinase kinase 10 [H...
MAP3K11               0.020   mitogen-activated protein kinase kinase kinase 11 [Ho...
DNMBP                 0.019   dynamin binding protein 
ITSN1                 0.019   intersectin 1 isoform ITSN-s 
ITSN1                 0.019   intersectin 1 isoform ITSN-l 
FCHSD1                0.019   FCH and double SH3 domains 1 
SH3D19                0.017   SH3 domain containing 19 isoform c 
SH3D19                0.017   SH3 domain containing 19 isoform b 
SH3D19                0.017   SH3 domain containing 19 isoform a 
VAV2                  0.017   vav 2 guanine nucleotide exchange factor isoform 1 ...
VAV2                  0.017   vav 2 guanine nucleotide exchange factor isoform 2 [...
MYO1E                 0.016   myosin IE 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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