TRAIP 27619

Name: TRAIP	Sequence: fasta or formatted (469aa)		NCBI GI: 40807469
Description: TRAF interacting protein		Referenced in: TNF and Related Signals
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 28 2 C cysteine 2.6 12 1 D aspartate 6.2 29 2 E glutamate 8.1 38 3 F phenylalanine 3.4 16 2 G glycine 3.6 17 2 H histidine 1.3 6 1 I isoleucine 4.1 19 2 K lysine 9.4 44 3 L leucine 10.9 51 3 M methionine 2.1 10 1 N asparagine 2.1 10 1 P proline 5.1 24 2 Q glutamine 7.5 35 3 R arginine 6.6 31 2 S serine 7.7 36 3 T threonine 5.1 24 1 V valine 6.6 31 2 W tryptophan 0.4 2 1 Y tyrosine 1.3 6 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TRAF interacting protein GOLGA3 0.040 Golgi autoantigen, golgin subfamily a, 3 CENPE 0.037 centromere protein E ERC1 0.037 RAB6-interacting protein 2 isoform epsilon ERC1 0.037 RAB6-interacting protein 2 isoform delta MYH10 0.036 myosin, heavy polypeptide 10, non-muscle MYH2 0.036 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.036 myosin, heavy chain 2, skeletal muscle, adult [Homo... CCDC88A 0.036 coiled-coil domain containing 88A isoform 1 MYH1 0.033 myosin, heavy chain 1, skeletal muscle, adult [Homo... MYH11 0.033 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.033 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... TPR 0.033 nuclear pore complex-associated protein TPR NIN 0.033 ninein isoform 4 NIN 0.033 ninein isoform 5 NIN 0.033 ninein isoform 1 NIN 0.033 ninein isoform 2 MYH9 0.033 myosin, heavy polypeptide 9, non-muscle MYH11 0.033 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.033 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... GOLGA4 0.033 golgi autoantigen, golgin subfamily a, 4 LAMB4 0.032 laminin, beta 4 CCDC88A 0.032 coiled-coil domain containing 88A isoform 2 C14orf145 0.032 hypothetical protein LOC145508 TMEM57 0.032 transmembrane protein 57 DSP 0.032 desmoplakin isoform I MYH3 0.032 myosin, heavy chain 3, skeletal muscle, embryonic [H... MYO18B 0.032 myosin XVIIIB ZNRF4 0.032 zinc and ring finger 4 MYH8 0.032 myosin, heavy chain 8, skeletal muscle, perinatal [... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.