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Search of human proteins with 40788007
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|40788007 FYN binding protein (FYB-120/130) isoform 2 [Homo
sapiens]
(783 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|40788007 FYN binding protein (FYB-120/130) isoform 2 [Homo sa... 1610 0.0
gi|42476118 FYN binding protein (FYB-120/130) isoform 1 [Homo sa... 1588 0.0
gi|166706917 hypothetical protein LOC199920 [Homo sapiens] 134 2e-31
gi|40807475 PML-RARA regulated adaptor molecule 1 [Homo sapiens] 94 6e-19
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 77 8e-14
gi|163965366 nascent polypeptide-associated complex alpha subuni... 75 2e-13
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 72 3e-12
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 70 6e-12
gi|210032580 SET domain containing 1B [Homo sapiens] 69 1e-11
gi|55750053 atrophin-1 [Homo sapiens] 68 3e-11
gi|55750041 atrophin-1 [Homo sapiens] 68 3e-11
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 68 4e-11
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 68 4e-11
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 67 6e-11
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 67 6e-11
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] 64 4e-10
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 62 2e-09
gi|150170670 piccolo isoform 2 [Homo sapiens] 62 2e-09
gi|150378539 piccolo isoform 1 [Homo sapiens] 62 2e-09
gi|153792074 proline rich 12 [Homo sapiens] 60 6e-09
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 60 8e-09
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 60 1e-08
gi|148727255 microtubule associated serine/threonine kinase fami... 60 1e-08
gi|41281612 zinc finger protein 828 [Homo sapiens] 59 1e-08
gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo ... 58 4e-08
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 58 4e-08
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 58 4e-08
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 58 4e-08
gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens] 57 5e-08
gi|54112403 chromodomain helicase DNA binding protein 7 [Homo sa... 57 7e-08
>gi|40788007 FYN binding protein (FYB-120/130) isoform 2 [Homo
sapiens]
Length = 783
Score = 1610 bits (4168), Expect = 0.0
Identities = 783/783 (100%), Positives = 783/783 (100%)
Query: 1 MAKYNTGGNPTEDVSVNSRPFRVTGPNSSSGIQARKNLFNNQGNASPPAGPSNVPKFGSP 60
MAKYNTGGNPTEDVSVNSRPFRVTGPNSSSGIQARKNLFNNQGNASPPAGPSNVPKFGSP
Sbjct: 1 MAKYNTGGNPTEDVSVNSRPFRVTGPNSSSGIQARKNLFNNQGNASPPAGPSNVPKFGSP 60
Query: 61 KPPVAVKPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRDPEAKVGFLKPVGPKPINL 120
KPPVAVKPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRDPEAKVGFLKPVGPKPINL
Sbjct: 61 KPPVAVKPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRDPEAKVGFLKPVGPKPINL 120
Query: 121 PKEDSKPTFPWPPGNKPSLHSVNQDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKF 180
PKEDSKPTFPWPPGNKPSLHSVNQDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKF
Sbjct: 121 PKEDSKPTFPWPPGNKPSLHSVNQDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKF 180
Query: 181 MSASQDLEPKPLFPKPAFGQKPPLSTENSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKP 240
MSASQDLEPKPLFPKPAFGQKPPLSTENSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKP
Sbjct: 181 MSASQDLEPKPLFPKPAFGQKPPLSTENSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKP 240
Query: 241 AREDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKIN 300
AREDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKIN
Sbjct: 241 AREDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKIN 300
Query: 301 QEELASGTPPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKP 360
QEELASGTPPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKP
Sbjct: 301 QEELASGTPPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKP 360
Query: 361 NRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPPLPASHPSQPPVPSLP 420
NRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPPLPASHPSQPPVPSLP
Sbjct: 361 NRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPPLPASHPSQPPVPSLP 420
Query: 421 PRNIKPPFDLKSPVNEDNQDGVTHSDGAGNLDEEQDSEGETYEDIEASKEREKKREKEEK 480
PRNIKPPFDLKSPVNEDNQDGVTHSDGAGNLDEEQDSEGETYEDIEASKEREKKREKEEK
Sbjct: 421 PRNIKPPFDLKSPVNEDNQDGVTHSDGAGNLDEEQDSEGETYEDIEASKEREKKREKEEK 480
Query: 481 KRLELEKKEQKEKEKKEQEIKKKFKLTGPIQVIHLAKACCDVKGGKNELSFKQGEQIEII 540
KRLELEKKEQKEKEKKEQEIKKKFKLTGPIQVIHLAKACCDVKGGKNELSFKQGEQIEII
Sbjct: 481 KRLELEKKEQKEKEKKEQEIKKKFKLTGPIQVIHLAKACCDVKGGKNELSFKQGEQIEII 540
Query: 541 RITDNPEGKWLGRTARGSYGYIKTTAVEIDYDSLKLKKDSLGAPSRPIEDDQEVYDDVAE 600
RITDNPEGKWLGRTARGSYGYIKTTAVEIDYDSLKLKKDSLGAPSRPIEDDQEVYDDVAE
Sbjct: 541 RITDNPEGKWLGRTARGSYGYIKTTAVEIDYDSLKLKKDSLGAPSRPIEDDQEVYDDVAE 600
Query: 601 QDDISSHSQSGSGGIFPPPPDDDIYDGIEEEDADDGFPAPPKQLDMGDEVYDDVDTSDFP 660
QDDISSHSQSGSGGIFPPPPDDDIYDGIEEEDADDGFPAPPKQLDMGDEVYDDVDTSDFP
Sbjct: 601 QDDISSHSQSGSGGIFPPPPDDDIYDGIEEEDADDGFPAPPKQLDMGDEVYDDVDTSDFP 660
Query: 661 VSSAEMSQGTNVGKAKTEEKDLKKLKKQEKEEKDFRKKFKYDGEIRVLYSTKVTTSITSK 720
VSSAEMSQGTNVGKAKTEEKDLKKLKKQEKEEKDFRKKFKYDGEIRVLYSTKVTTSITSK
Sbjct: 661 VSSAEMSQGTNVGKAKTEEKDLKKLKKQEKEEKDFRKKFKYDGEIRVLYSTKVTTSITSK 720
Query: 721 KWGTRDLQVKPGESLEVIQTTDDTKVLCRNEEGKYGYVLRSYLADNDGEIYDDIADGCIY 780
KWGTRDLQVKPGESLEVIQTTDDTKVLCRNEEGKYGYVLRSYLADNDGEIYDDIADGCIY
Sbjct: 721 KWGTRDLQVKPGESLEVIQTTDDTKVLCRNEEGKYGYVLRSYLADNDGEIYDDIADGCIY 780
Query: 781 DND 783
DND
Sbjct: 781 DND 783
>gi|42476118 FYN binding protein (FYB-120/130) isoform 1 [Homo
sapiens]
Length = 829
Score = 1588 bits (4111), Expect = 0.0
Identities = 783/829 (94%), Positives = 783/829 (94%), Gaps = 46/829 (5%)
Query: 1 MAKYNTGGNPTEDVSVNSRPFRVTGPNSSSGIQARKNLFNNQGNASPPAGPSNVPKFGSP 60
MAKYNTGGNPTEDVSVNSRPFRVTGPNSSSGIQARKNLFNNQGNASPPAGPSNVPKFGSP
Sbjct: 1 MAKYNTGGNPTEDVSVNSRPFRVTGPNSSSGIQARKNLFNNQGNASPPAGPSNVPKFGSP 60
Query: 61 KPPVAVKPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRDPEAKVGFLKPVGPKPINL 120
KPPVAVKPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRDPEAKVGFLKPVGPKPINL
Sbjct: 61 KPPVAVKPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRDPEAKVGFLKPVGPKPINL 120
Query: 121 PKEDSKPTFPWPPGNKPSLHSVNQDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKF 180
PKEDSKPTFPWPPGNKPSLHSVNQDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKF
Sbjct: 121 PKEDSKPTFPWPPGNKPSLHSVNQDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKF 180
Query: 181 MSASQDLEPKPLFPKPAFGQKPPLSTENSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKP 240
MSASQDLEPKPLFPKPAFGQKPPLSTENSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKP
Sbjct: 181 MSASQDLEPKPLFPKPAFGQKPPLSTENSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKP 240
Query: 241 AREDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKIN 300
AREDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKIN
Sbjct: 241 AREDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKIN 300
Query: 301 QEELASGTPPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKP 360
QEELASGTPPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKP
Sbjct: 301 QEELASGTPPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKP 360
Query: 361 NRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPPLPASHPSQPPVPSLP 420
NRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPPLPASHPSQPPVPSLP
Sbjct: 361 NRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPPLPASHPSQPPVPSLP 420
Query: 421 PRNIKPPFDLKSPVNEDNQDGVTHSDGAGNLDEEQDSEGETYEDIEASKEREKKREKEEK 480
PRNIKPPFDLKSPVNEDNQDGVTHSDGAGNLDEEQDSEGETYEDIEASKEREKKREKEEK
Sbjct: 421 PRNIKPPFDLKSPVNEDNQDGVTHSDGAGNLDEEQDSEGETYEDIEASKEREKKREKEEK 480
Query: 481 KRLELEKKEQKEKEKKEQEIKKKFKLTGPIQVIHLAKACCDVKGGKNELSFKQGEQIEII 540
KRLELEKKEQKEKEKKEQEIKKKFKLTGPIQVIHLAKACCDVKGGKNELSFKQGEQIEII
Sbjct: 481 KRLELEKKEQKEKEKKEQEIKKKFKLTGPIQVIHLAKACCDVKGGKNELSFKQGEQIEII 540
Query: 541 RITDNPEGKWLGRTARGSYGYIKTTAVEIDYDSLKLKKDSLGAPSRPIEDDQEVYDDVAE 600
RITDNPEGKWLGRTARGSYGYIKTTAVEIDYDSLKLKKDSLGAPSRPIEDDQEVYDDVAE
Sbjct: 541 RITDNPEGKWLGRTARGSYGYIKTTAVEIDYDSLKLKKDSLGAPSRPIEDDQEVYDDVAE 600
Query: 601 QDDISSHSQSGSGGIFPPPPDDDIYDGIEEEDADDG------------------------ 636
QDDISSHSQSGSGGIFPPPPDDDIYDGIEEEDADDG
Sbjct: 601 QDDISSHSQSGSGGIFPPPPDDDIYDGIEEEDADDGSTLQVQEKSNTWSWGILKMLKGKD 660
Query: 637 ----------------------FPAPPKQLDMGDEVYDDVDTSDFPVSSAEMSQGTNVGK 674
FPAPPKQLDMGDEVYDDVDTSDFPVSSAEMSQGTNVGK
Sbjct: 661 DRKKSIREKPKVSDSDNNEGSSFPAPPKQLDMGDEVYDDVDTSDFPVSSAEMSQGTNVGK 720
Query: 675 AKTEEKDLKKLKKQEKEEKDFRKKFKYDGEIRVLYSTKVTTSITSKKWGTRDLQVKPGES 734
AKTEEKDLKKLKKQEKEEKDFRKKFKYDGEIRVLYSTKVTTSITSKKWGTRDLQVKPGES
Sbjct: 721 AKTEEKDLKKLKKQEKEEKDFRKKFKYDGEIRVLYSTKVTTSITSKKWGTRDLQVKPGES 780
Query: 735 LEVIQTTDDTKVLCRNEEGKYGYVLRSYLADNDGEIYDDIADGCIYDND 783
LEVIQTTDDTKVLCRNEEGKYGYVLRSYLADNDGEIYDDIADGCIYDND
Sbjct: 781 LEVIQTTDDTKVLCRNEEGKYGYVLRSYLADNDGEIYDDIADGCIYDND 829
>gi|166706917 hypothetical protein LOC199920 [Homo sapiens]
Length = 728
Score = 134 bits (338), Expect = 2e-31
Identities = 138/498 (27%), Positives = 225/498 (45%), Gaps = 90/498 (18%)
Query: 328 QSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTSKGQTSY 387
Q+ EK+ ++ PK KPLP + +LGPPPPKP+RPP V+L F + + ++G+ +
Sbjct: 250 QAPEKQPDVRHHHLPKTKPLPSIDSLGPPPPKPSRPPIVNLQAFQRQPAAVPKTQGEVTV 309
Query: 388 STTSLPPPPPSHPASQPPLPASHPSQPPVPSLPPR----NIKPPFDLKSPVNEDNQDGVT 443
SL P + + P H + + L N+ ++ P E G+
Sbjct: 310 EEGSLSPERLFNAEFEEP----HNYEATISYLRHSGNSINLCTAKEIADPTYEV---GI- 361
Query: 444 HSDGAGNLDEEQDSEGETYEDIEASKEREKKREKEEKKRLELEKKEQKEKEKKEQEIKKK 503
EE G+ + E S + E K+ KE K+ EL+ K EKE + K
Sbjct: 362 ---------EELQKPGKNFPYPEPSAKHEDKKMKE-KQPCELKPKNT-EKEPYSNHVFKV 410
Query: 504 FKLTGPIQVIHLAKACCDVKGGKNELSFKQGEQIEIIRITDNPEGKWLGRTARGSYGYI- 562
G + I + G +N L+ KQ I+II+ PEG L R ++G G++
Sbjct: 411 DACEGTPEKIQMTNVHT---GRRNMLAGKQEAMIDIIQTNPCPEGPKLARHSQGHCGHLE 467
Query: 563 --------------KTTAV------EIDYDSLKLKK----DSLGAPSRPIEDDQEVYDDV 598
KT+++ +++Y ++ K SL + S E+++E+Y+DV
Sbjct: 468 VLESTKETPDLGVSKTSSISEEIYDDVEYSRKEVPKLNYSSSLASSS---EENRELYEDV 524
Query: 599 AE-QDDISSHSQSGSGGI------FPPPPDDDIYDGIEEEDADDGFPAPPKQLDMGDE-- 649
+ +++ G + F D + ++ F L++ +
Sbjct: 525 YKTKNNYPKIDLDGKEALKRLQQFFKKEKDRFKIKKTKSKENLSAFSILLPDLELKSQEV 584
Query: 650 -VYDDVDTSDFPV----------------------SSAEMSQGTNVGKA-KTEEKDLKKL 685
+YDDVD S+ + AE S+ + KT++++L+K
Sbjct: 585 IIYDDVDLSEKESKDEDKLKMWKPKFLTPKEKKEKNGAEESESFSPRNFFKTKKQNLEK- 643
Query: 686 KKQEKEEKDFRKKFKYDGEIRVLYSTKVTTSITSKKWGTRDLQVKPGESLEVIQTTDDTK 745
+ ++EEK FR++FKYD EI V+ +T V S S+ G DL + PGE LEVI TT+
Sbjct: 644 NRMKREEKLFRERFKYDKEIIVI-NTAVACSNNSRN-GIFDLPISPGEELEVIDTTEQNL 701
Query: 746 VLCRNEEGKYGYVLRSYL 763
V+CRN +GKYGYVL +L
Sbjct: 702 VICRNSKGKYGYVLIEHL 719
Score = 44.3 bits (103), Expect = 4e-04
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 17/117 (14%)
Query: 469 KEREKKREKEEK-----------KRLELEKKEQKEKEKKEQEIKKKFKLTGPIQVIHLAK 517
KE+++K EE K+ LEK K +EK +E +FK I VI+ A
Sbjct: 614 KEKKEKNGAEESESFSPRNFFKTKKQNLEKNRMKREEKLFRE---RFKYDKEIIVINTAV 670
Query: 518 ACC-DVKGGKNELSFKQGEQIEIIRITDNPEGKWLGRTARGSYGYIKTTAVEIDYDS 573
AC + + G +L GE++E+I T+ + + R ++G YGY+ ++ + S
Sbjct: 671 ACSNNSRNGIFDLPISPGEELEVIDTTE--QNLVICRNSKGKYGYVLIEHLDFKHQS 725
>gi|40807475 PML-RARA regulated adaptor molecule 1 [Homo sapiens]
Length = 669
Score = 93.6 bits (231), Expect = 6e-19
Identities = 159/617 (25%), Positives = 222/617 (35%), Gaps = 123/617 (19%)
Query: 47 PPAGPSNVPKFGSPKPPVAV----KPSSEEKPDKEPKPPFLKPTGAGQRFGTP----ASL 98
PP +++PK P PP KPS E D K P L T ++ P A L
Sbjct: 96 PPPEVTDLPK--KPPPPEVTDLPKKPSKLELSDLSKKFPQLGATPFPRKPLQPEVGEAPL 153
Query: 99 TTRDPEAKVGFLKPVGPK----PINLPKEDSKPTFP---WPP--------GNKPSLHSVN 143
PE KP+ P P P E FP W P +P L +
Sbjct: 154 KASLPEPGAPARKPLQPDELSHPARPPSEPKSGAFPRKLWQPEAGEATPRSPQPELSTFP 213
Query: 144 QDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKFMSASQ-------DLEPK---PLF 193
+ KP P+ P Q PK + + +F A+Q EPK F
Sbjct: 214 K----KPAQPEFNVYPKKPPQPQVGGLPKKSVPQPEFSEAAQTPLWKPQSSEPKRDSSAF 269
Query: 194 PKPA-------FGQKPPLST--ENSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKPARED 244
PK A F +KPP + + P +V + PA SK P +P
Sbjct: 270 PKKASQPPLSDFPKKPPQPELGDLTRTSSEPEVSVLPKRPRPAEFKALSKKPP-QPELGG 328
Query: 245 SENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEEL 304
E +SLP +L+P R GP + E K F + L
Sbjct: 329 LPRTSSEPEFNSLPRK--LLQP--ERRGPPRKFSQPEPSAVLKRHPQPEFFGDLPRKPPL 384
Query: 305 ASGTPPA-----------RFPKAPSKLTVGGP-WGQ-----SQEKEKGDKNSATPKQKPL 347
S + R P +P G P W S G + S P+++PL
Sbjct: 385 PSSASESSLPAAVAGFSSRHPLSPGFGAAGTPRWRSGGLVHSGGARPGLRPSHPPRRRPL 444
Query: 348 PPLFTLGPPPPKPNRPPN-VDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPPL 406
PP +LG PP KP PP VD+ F + S+ + + S A+
Sbjct: 445 PPASSLGHPPAKPPLPPGPVDMQSFRRPSAASIDLRRTRS--------------AAGLHF 490
Query: 407 PASHPSQPPVPSLPPRNIKPPFDLKSPVNEDNQDGVTHSDGAGNLDEEQDSEGETYEDIE 466
P PVP ++L V E D G Q + +D
Sbjct: 491 QDRQPEDIPVPD-------EIYELYDDV-EPRDDSSPSPKGRDEAPSVQQAARRPPQDPA 542
Query: 467 ASKEREKKREKEEKKRLELEKKEQKEKEKKEQEIKKKFKLTGPIQVIHLAKACCDV---- 522
KE++ + ++ +L K+ ++ EK E+E +KKFK G I V+H K D
Sbjct: 543 LRKEKDPQPQQLPPMDPKL-LKQLRKAEKAEREFRKKFKFEGEI-VVH-TKMMIDPNAKT 599
Query: 523 -KGGKNELSFKQGEQIEIIRITDNPEGKWLGRTARGSYGYIKTTAVEIDYDSLKLKKDSL 581
+GG L ++GE +E+I T N E L R +G YGY+ TA+
Sbjct: 600 RRGGGKHLGIRRGEILEVIEFTSNEE--MLCRDPKGKYGYVPRTAL-------------- 643
Query: 582 GAPSRPIEDDQEVYDDV 598
P+E EVYDDV
Sbjct: 644 ----LPLE--TEVYDDV 654
Score = 90.9 bits (224), Expect = 4e-18
Identities = 55/162 (33%), Positives = 90/162 (55%), Gaps = 11/162 (6%)
Query: 618 PPPDD--DIYDGIEEEDADDGFPAPPKQLDMGDEVYDDVDTSDFPVSSAEMSQGTNVGKA 675
P PD+ ++YD +E D D P+P + DE + P + + +
Sbjct: 499 PVPDEIYELYDDVEPRD--DSSPSPKGR----DEAPSVQQAARRPPQDPALRKEKDPQPQ 552
Query: 676 KTEEKD---LKKLKKQEKEEKDFRKKFKYDGEIRVLYSTKVTTSITSKKWGTRDLQVKPG 732
+ D LK+L+K EK E++FRKKFK++GEI V + + +++ G + L ++ G
Sbjct: 553 QLPPMDPKLLKQLRKAEKAEREFRKKFKFEGEIVVHTKMMIDPNAKTRRGGGKHLGIRRG 612
Query: 733 ESLEVIQTTDDTKVLCRNEEGKYGYVLRSYLADNDGEIYDDI 774
E LEVI+ T + ++LCR+ +GKYGYV R+ L + E+YDD+
Sbjct: 613 EILEVIEFTSNEEMLCRDPKGKYGYVPRTALLPLETEVYDDV 654
Score = 64.3 bits (155), Expect = 4e-10
Identities = 96/374 (25%), Positives = 130/374 (34%), Gaps = 42/374 (11%)
Query: 65 AVKPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRDPEAKVGFLKPVGPKPINLPKED 124
A +P + P K PKP F K Q + PE LKP P+ +LPK+
Sbjct: 24 ASQPEPSDLPKKPPKPEFGKLKKFSQPELSEHPKKAPLPEFGAVSLKPPPPEVTDLPKKP 83
Query: 125 SKPTFPWPPGNKPSLHSVNQDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKFMSAS 184
P P KP V DL PK P P ++ +K + +L+ + KF
Sbjct: 84 PPPEVTDLP-KKPPPPEVT---DL----PKKPPPPEVTDLPKKPSKLELSDLSKKFPQLG 135
Query: 185 QDLEP-KPLFPKPAFGQKPPLSTENSHEDESPMKNVSSSKGSPA--PLGVRSKSGPLKPA 241
P KPL P+ E+P+K G+PA PL S PA
Sbjct: 136 ATPFPRKPLQPEVG---------------EAPLKASLPEPGAPARKPLQPDELS---HPA 177
Query: 242 REDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQ 301
R SE K A FP + +P A P + + N + K Q
Sbjct: 178 RPPSEPKSGA-------FPRKLWQPEAGEATPRSPQPELSTFPKKPAQPEFNVYPKKPPQ 230
Query: 302 EELASGTPPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKPN 361
++ G P P+ P + Q E +SA PK+ PPL P KP
Sbjct: 231 PQV-GGLPKKSVPQPEFSEAAQTPLWKPQSSEPKRDSSAFPKKASQPPLSDF---PKKPP 286
Query: 362 RPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPPLPASHPSQPPVPS--L 419
+P DLT+ + K +L PP P +S P +P L
Sbjct: 287 QPELGDLTRTSSEPEVSVLPKRPRPAEFKALSKKPPQPELGGLPRTSSEPEFNSLPRKLL 346
Query: 420 PPRNIKPPFDLKSP 433
P PP P
Sbjct: 347 QPERRGPPRKFSQP 360
Score = 35.4 bits (80), Expect = 0.21
Identities = 39/151 (25%), Positives = 52/151 (34%), Gaps = 23/151 (15%)
Query: 298 KINQEELASGTPPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLG--P 355
K +Q EL+ A P+ +G K + + PK+ P P + L P
Sbjct: 46 KFSQPELSEHPKKAPLPE----------FGAVSLKPPPPEVTDLPKKPPPPEVTDLPKKP 95
Query: 356 PPP-------KPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPPLPA 408
PPP KP P DL K + SK T P P + PL A
Sbjct: 96 PPPEVTDLPKKPPPPEVTDLPKKPSKLELSDLSKKFPQLGATPFPRKPLQPEVGEAPLKA 155
Query: 409 SHPSQPPVPSLPPRNIKPPFDLKSPVNEDNQ 439
S P P P R P +L P ++
Sbjct: 156 SLPE----PGAPARKPLQPDELSHPARPPSE 182
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 76.6 bits (187), Expect = 8e-14
Identities = 109/435 (25%), Positives = 142/435 (32%), Gaps = 53/435 (12%)
Query: 9 NPTEDVSVNSRPFRVTGPNSSSGIQARKNLFNNQGNASPPAGPSNVPKFGSPKP------ 62
N EDVS P + G + Q QG SPP P P G +P
Sbjct: 18 NLNEDVSQEESPSLIAGNPQGAPPQGGNK---PQGPPSPPGKPQGPPPQGGNQPQGPPPP 74
Query: 63 ---PVAVKPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRDPEAKVGFLKPVGPKPIN 119
P P KP P P KP G P +R P + G KP GP P
Sbjct: 75 PGKPQGPPPQGGNKPQGPPPPG--KPQGP-----PPQGDKSRSPRSPPG--KPQGPPP-- 123
Query: 120 LPKEDSKPTFPWPPGNKPS---LHSVNQDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGV 176
+ ++P P PP KP N+ P G GP PP +N+ + +
Sbjct: 124 --QGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP-PPQGDNKSRSSRSPPGKP 180
Query: 177 KGKFMSASQDLEPKPLFPKPAFGQKPPLSTENSHEDESPMKNVSSSKGSPAPLGVRSKSG 236
+G + P P P Q PP N + P +G P +S+S
Sbjct: 181 QGPPPQGGNQPQGPP--PPPGKPQGPPPQGGNKPQGPPPP---GKPQGPPPQGDNKSQSA 235
Query: 237 PLKPAREDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQ 296
P + + P P P +G P G K +
Sbjct: 236 RSPPGKPQGPPPQGGNQPQGPPPP-----PGKPQGPP---PQGGNKPQGPPPPGKPQGPP 287
Query: 297 SKINQEELASGTPPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPP 356
+ + +S +PP + P+ P GG Q G P+ P GPP
Sbjct: 288 PQGGSKSRSSRSPPGK-PQGPPPQ--GGNQPQGPPPPPGKPQGPPPQGGNKPQ----GPP 340
Query: 357 PP-KPNRPPNVDLTKFHKTSS--GNSTSKGQTSYSTTSLPPPPPSHPASQPPL-PASHPS 412
PP KP PP +K S G Q + PPPP QP PA P
Sbjct: 341 PPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQ 400
Query: 413 QPPVPSLPPRNIKPP 427
PP P R +PP
Sbjct: 401 GPPRPPQGGRPSRPP 415
Score = 50.4 bits (119), Expect = 6e-06
Identities = 59/229 (25%), Positives = 77/229 (33%), Gaps = 20/229 (8%)
Query: 207 ENSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKPAREDSENKDHAGEISSLPFPGVVLKP 266
E+ ++ESP + +G+P P G GP P + G P P P
Sbjct: 21 EDVSQEESPSLIAGNPQGAP-PQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPP----PP 75
Query: 267 AASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELASGTPPARFPKAPSKLTVGGPW 326
+G P N K K + + +PP + P+ P GG
Sbjct: 76 GKPQGPPPQGGN----KPQGPPPPGKPQGPPPQGDKSRSPRSPPGK-PQGPPPQ--GGNQ 128
Query: 327 GQSQEKEKGDKNSATPKQKPLPPLFTLGPPPP-KPNRPPNVDLTKFHKTSSGNSTSKGQT 385
Q G P+ P GPPPP KP PP K + S +G
Sbjct: 129 PQGPPPPPGKPQGPPPQGGNKPQ----GPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPP 184
Query: 386 SYSTTSL--PPPPPSHPASQPPLPASHPSQPPVPSLPPRNIKPPFDLKS 432
PPPPP P PP + P PP P P+ P D KS
Sbjct: 185 PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPG-KPQGPPPQGDNKS 232
Score = 49.7 bits (117), Expect = 1e-05
Identities = 43/161 (26%), Positives = 63/161 (39%), Gaps = 19/161 (11%)
Query: 288 IDAAKNTFQSKINQEE---LASGTPPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQ 344
+ +A+N ++QEE L +G P P+ +K G P + + + P+
Sbjct: 13 LSSAQN-LNEDVSQEESPSLIAGNPQGAPPQGGNK-PQGPPSPPGKPQGPPPQGGNQPQG 70
Query: 345 KPLPPLFTLGPPP---------PKPNRP----PNVDLTKFHKTSSGNSTSKGQTSYSTTS 391
P PP GPPP P P +P P D ++ ++ G +
Sbjct: 71 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQ 130
Query: 392 LPPPPPSHPASQPPLPASHPSQPPVPSLPPRNIKPPFDLKS 432
PPPPP P PP + P PP P P+ P D KS
Sbjct: 131 GPPPPPGKPQGPPPQGGNKPQGPPPPG-KPQGPPPQGDNKS 170
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 75.5 bits (184), Expect = 2e-13
Identities = 108/419 (25%), Positives = 141/419 (33%), Gaps = 51/419 (12%)
Query: 46 SPPAGPSNVPKFGSPKPPVAVKPS-----SEEKPDKEPKPPFLKPTGAGQRFGTPASLTT 100
SP GP+ +P PP A PS + P P PP P TP+
Sbjct: 949 SPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGA 1008
Query: 101 RDPEAKVGFLKPVGPKPINLPKEDSKPTFPWPPGNKPSLHSVNQDHDLKPLGPKSGPTPP 160
P A P PK S P PP K S + PL PK PT P
Sbjct: 1009 PTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAAT-------PL-PKGAPTTP 1060
Query: 161 TSENEQKQAFPKLTGVKG-KFMSASQDLEPK--PLFPKPAFGQKPPLSTENSHED---ES 214
+ + P +KG A+ PK P P P PP +T S +
Sbjct: 1061 AATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATP 1120
Query: 215 PMKNVSSSKGS--PAPLGVRS----KSGPLKPAREDSENKDHAGEISSLPFPGVVLKPAA 268
P K ++ + P+P G + K P PA K G +++ P G PAA
Sbjct: 1121 PHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPK---GGLATPPPKGAPTTPAA 1177
Query: 269 SRGGP--GLSKNGEEKKEDRKIDAAKNTFQSKINQEELASGTPPARFPKAP-SKLTVGGP 325
+ P GL+ + + + T PA P +P L P
Sbjct: 1178 TPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSP 1237
Query: 326 WG------QSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKPN--RPPNVDLTKFHKTSSG 377
G + KG + PK P PP T PP K PP HK +
Sbjct: 1238 KGAPTTPAATPPSPKGGPATPPPKGAPTPPAAT--PPSLKGGLATPP-------HKGAPN 1288
Query: 378 NS--TSKGQTSYSTTSLPPPPPSHPASQPPLPASHPSQPPVPSLP-PRNIKPPFDLKSP 433
+ T TS P P+ PA+ PP P P PP P P + PP +P
Sbjct: 1289 PAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTP 1347
Score = 73.2 bits (178), Expect = 9e-13
Identities = 106/405 (26%), Positives = 136/405 (33%), Gaps = 58/405 (14%)
Query: 48 PAGPSNVPKFGSPK---PPVAVKPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRDPE 104
P N P SP+ P+A + E P P P L P G TP D
Sbjct: 702 PTASENCPVAPSPQNTCAPLATLVLAPEIPKSVPSPS-LPPAG------TPPGTKKVDGI 754
Query: 105 AKVGFLKPVGPKPINLPKEDSKPTFPWPPGNKPSLHSVNQDHDLKPLGPKSGPT---PPT 161
+ L PV P P EDS + +K +L + PLG P PPT
Sbjct: 755 SHTSALAPVASSPKECPTEDSGASAT--ASSKGTLTYLADSPS--PLGVSVSPQTKRPPT 810
Query: 162 SENEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKPAFGQKPPLSTENSHEDESPMKNVSS 221
+ P G S +E L Q S +H P S
Sbjct: 811 KKGSAGPDTPI-----GNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPP-----S 860
Query: 222 SKGSPAPLGVR--SKSGPLKPAREDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNG 279
KG+P P V S G P +E + +LPFP A + P LS
Sbjct: 861 PKGAPTPSAVTPLSPKGVTLPPKETP-----TPSVVNLPFPKEGPATPAPKQAPALSMTS 915
Query: 280 EEKKEDRKIDAAKNTFQSKINQEELASGTPPARFPKAPSKLTVGGPWGQSQE-------- 331
K+ R A K S + + TPPA P +P GGP S +
Sbjct: 916 SSPKKARATPAPKGIPASPSPK---GAPTPPAATPPSPK----GGPATPSPKWAPTPPAA 968
Query: 332 ---KEKGDKNSATPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTSKGQTSYS 388
KG + +PK P PP T PP P P K T + + S +
Sbjct: 969 TPPSPKGGPATPSPKGAPTPPAAT----PPSPKGGPATPSPKGAPTPPAVTPPSPKGSPA 1024
Query: 389 TTSLPPPPPSHPASQPPLPASHPSQPPVPSLPPRNIKPPFDLKSP 433
T P + PA+ PP P P+ P+P P P L SP
Sbjct: 1025 ATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTT--PAATLPSP 1067
Score = 68.2 bits (165), Expect = 3e-11
Identities = 104/393 (26%), Positives = 137/393 (34%), Gaps = 61/393 (15%)
Query: 46 SPPAGPSNVPKFGSPKPPVAVKPSSEEKPDK-----EPKPPFLKPTGAGQRFGTPASLTT 100
SP GP+ P G+P PP A PS + P P PP + P GTP +L
Sbjct: 1296 SPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPK---GTP-TLPA 1351
Query: 101 RDPEAKVGFLKP---VGP-KPINLPKEDSKPTF-PWPPGNKPSLHSVNQDHD---LKPLG 152
P +K G P GP P P P P P P++ S D + PL
Sbjct: 1352 TTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLS 1411
Query: 153 PKSGP-TPPTSENEQKQAF-----PKLTGVKGKFMSASQDLEPKPLFPKPAFGQKPPLST 206
PK P TP T E + P +T V K A+ + P P P T
Sbjct: 1412 PKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVT 1471
Query: 207 ENSHEDESPMKNVSSSK------GSPAPLGVRSKSGPLKPAREDSENKDHAGEISSLPFP 260
S ++ K V++S +PAP+G P PA S K+ SS P
Sbjct: 1472 PPSPKEPPAPKQVATSSSPKKAPATPAPMG-----APTLPAVIPSSPKEVPATPSSRRDP 1526
Query: 261 GVVLKPAASRGGPG-LSKNGEEKKEDRKIDAAKNTFQSKINQEELASGTPPARFPKAPSK 319
S+ P L+ + + K T I + A TP ++ +P
Sbjct: 1527 IAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKT--PAIPTPKEAPATPSSKEASSPPA 1584
Query: 320 LTVGGPWGQSQEKE---KGDKNSATPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSS 376
+T G KE S +PK+ P PP T PP P + P K
Sbjct: 1585 VTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVT----PPSPEKGPATPAPK------ 1634
Query: 377 GNSTSKGQTSYSTTSLPPPPPSHPASQPPLPAS 409
T + PP PS P PAS
Sbjct: 1635 -----------GTPTSPPVTPSSLKDSPTSPAS 1656
Score = 66.2 bits (160), Expect = 1e-10
Identities = 106/437 (24%), Positives = 137/437 (31%), Gaps = 52/437 (11%)
Query: 46 SPPAGPSNVPKFGSPKPPVAVKPSSE-----EKPDKEPKPPFLKPTGA-GQRFGTPASLT 99
SP GP+ G+P PP A PS + P P PP + P G TP
Sbjct: 972 SPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKG 1031
Query: 100 TRDPEAKVGFLKPVGPKPINLPK---EDSKPTFPWPPGNK--PSLHSVNQDHDLKPLGPK 154
P A P LPK T P P G PSL P PK
Sbjct: 1032 ASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPK 1091
Query: 155 SGPTPPTSENEQKQAFPKLTGVKGKFMSASQDLEPK-----PLFPKPAFGQKPPLS--TE 207
GP P+ + KG + P P PK PP T
Sbjct: 1092 GGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTT 1151
Query: 208 NSHEDESPMKNVSSS--KGSP--------APLGVRS----KSGPLKPAREDSENKDHAGE 253
+ SP +++ KG+P +P G + K P PA K G
Sbjct: 1152 PAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPK---GG 1208
Query: 254 ISSLPFPGVVLKPAASRGGP--GLSKNGEEKKEDRKIDAAKNTFQSKINQEELASGTPPA 311
+++ G PAA+ P GL+ + + + TPPA
Sbjct: 1209 LATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPA 1268
Query: 312 RFPKA-------PSKLTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTL-------GPPP 357
P + P P + KG ++ PK P PP T G PP
Sbjct: 1269 ATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPP 1328
Query: 358 PK-PNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPPLPASHPSQPPV 416
PK PP V T + +T+ TT P+ PA+ P PP
Sbjct: 1329 PKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPS 1388
Query: 417 PSLPPRNIKPPFDLKSP 433
P P P D SP
Sbjct: 1389 PKRGPAIPSPKGDPTSP 1405
Score = 65.1 bits (157), Expect = 2e-10
Identities = 123/484 (25%), Positives = 171/484 (35%), Gaps = 57/484 (11%)
Query: 44 NASPPAGPSNVPKFGSPKPPVAVKPSSEEKP-DKEPKPPFLKPTGAGQRFGTPASLTTRD 102
++SP P+ G+P P + S +E P + + PT TPA+L ++
Sbjct: 1487 SSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKE 1546
Query: 103 ----PEAKVGFLK--PVGPKPINLPKEDSKPTFPWPPGNKPSLH--SVNQDHDLKP---- 150
P V K P P P P S PP PS + + + L P
Sbjct: 1547 ALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVT 1606
Query: 151 -LGPKSGPTPPTSENEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKPAFGQKPPLSTENS 209
PK PTPP + P KG S + P L P P S
Sbjct: 1607 SPSPKEAPTPPAVTPPSPEKGPATPAPKG--TPTSPPVTPSSLKDSPT----SPASVTCK 1660
Query: 210 HEDESPMKNVSSSKGSPAPLGVRS-KSGPLKPAREDS------ENKDHAGEISSLPFPGV 262
P +SKG PA G + K + PA E + K + SS P +
Sbjct: 1661 MGATVP----QASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPI 1716
Query: 263 VLKPAASRGGPG-LSKNGEEKKEDRKIDAAKNTFQSKINQEELASGTPPARFPKAPSKLT 321
P+A G G LS + D++K + PP KA + LT
Sbjct: 1717 CPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGPLAPPE--SKASTPLT 1774
Query: 322 VGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSG---N 378
+ EK SA+ P PP+ P P P PP +F +S G
Sbjct: 1775 AA-----AFEKVLPKPESASVSAAPSPPVSLPLAPSPVPTLPPK---QQFLPSSPGLVLE 1826
Query: 379 STSKGQTSYSTTSLPPPPPSHPASQPPLPASHPSQPPVPSLP-PRNIKPPF---DLKSPV 434
S SK L P P P S P Q + ++P P++ P K PV
Sbjct: 1827 SPSKPLAPADEDELLPLIPPEPIS-----GGVPFQSVLVNMPTPKSAGIPVPTPSAKQPV 1881
Query: 435 NEDNQDGVTHSDGAGNLD--EEQDSEGETYEDIEASKEREKKREKEEK-KRLELEKKEQK 491
++N+ T SD ++ EEQDS T + + + E E K K+ EKK +K
Sbjct: 1882 TKNNKGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRSEKKARK 1941
Query: 492 EKEK 495
K
Sbjct: 1942 AMSK 1945
Score = 63.5 bits (153), Expect = 7e-10
Identities = 96/412 (23%), Positives = 133/412 (32%), Gaps = 42/412 (10%)
Query: 45 ASPPAGPSNVPKFGSPKPPVAVKPSSEEKP-------DKEPK--PPFLKPTGAGQRFGTP 95
++P GP+ G P P PS +E P PK P P GA
Sbjct: 1450 SAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVI 1509
Query: 96 ASLTTRDPEAKVGFLKPVGPKPINLPKEDSKPTFPWPPGNKPSLHSVNQDHDLKPLGPKS 155
S P P+ P L K+ P P++ + PK
Sbjct: 1510 PSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKE 1569
Query: 156 GPTPPTSENEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKPAFGQKPPLSTENSHEDESP 215
P P+S+ + KG + P P P PP T S E
Sbjct: 1570 APATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPE---- 1625
Query: 216 MKNVSSSKGSPAPLGVRSKSGPLKPAREDSENKDHAGEISSLPFPGVVLKPAASRGGPGL 275
+PAP G P P S KD +S+ P AS+G P
Sbjct: 1626 -----KGPATPAPKGT-----PTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPA- 1674
Query: 276 SKNGEEKKEDRKIDAAKNTF-----QSKINQEELASGTPPARFPKAPSKLTVGGPWGQSQ 330
K KE A ++T K Q + +S T P P +K GP
Sbjct: 1675 KKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVA 1734
Query: 331 EK-----EKGDKNSATPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTSKGQT 385
+K +A K P L PP K + P + F K ++
Sbjct: 1735 PAPLLPVQKDSSKTAKGKDASHSPKGPLAPPESKASTP--LTAAAFEKVLPKPESA---- 1788
Query: 386 SYSTTSLPPPPPSHPASQPPLPASHPSQPPVPSLPPRNIKPPFDLKSPVNED 437
S ++ P PP S P + P+P P Q +PS P ++ P +P +ED
Sbjct: 1789 --SVSAAPSPPVSLPLAPSPVPTLPPKQQFLPSSPGLVLESPSKPLAPADED 1838
Score = 61.6 bits (148), Expect = 3e-09
Identities = 103/420 (24%), Positives = 129/420 (30%), Gaps = 104/420 (24%)
Query: 7 GGNPTEDVSVNSRPFRVTGPNSSSGIQARKNLFNNQGNASPPAGPSNVPKFGSPKPPVAV 66
GG T + P T P+ G + +G PPA PK G PP
Sbjct: 1069 GGPATPSLKGAPTPPAATPPSPKGGPATP----SPKGAPMPPAATPPSPKGGLATPPHKG 1124
Query: 67 KPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRDPEAKVGFLKPVGPKPINLPKEDSK 126
P++ PK P G P + P K G P PK
Sbjct: 1125 APTTPAATPPSPKGGLATPPPK----GAPTTPAATPPSPKGGLATP-PPK--------GA 1171
Query: 127 PTFP--WPPGNKPSLHSVNQDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKFMSAS 184
PT P PP K L + + PK PT P + + KG
Sbjct: 1172 PTTPAATPPSPKGGLATPS---------PKGAPTTPAATPPSPKGGLATPSPKG------ 1216
Query: 185 QDLEPKPLFPKPAFGQKPPLSTENSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKPARED 244
P P P G P +P S KG PA K P PA
Sbjct: 1217 APTTPAATPPSPKGGLATP---SPKGAPTTPAATPPSPKGGPAT--PPPKGAPTPPAATP 1271
Query: 245 SENKDHAGEISSLPFPG----VVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKIN 300
K G +++ P G V+ P + +GGP S
Sbjct: 1272 PSLK---GGLATPPHKGAPNPAVVTPPSPKGGPATS------------------------ 1304
Query: 301 QEELASGTPPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKP 360
+ TPPA P +P KG + PK P PP T PP P
Sbjct: 1305 -PPKGAPTPPAATPPSP----------------KGSPGTPPPKGAPTPPAVT----PPSP 1343
Query: 361 NRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPP---PSH---PASQPPLPASHPSQP 414
P + T S+ G T+ S+ P PP PSH PA PP P P+ P
Sbjct: 1344 KGTPTLPATT-------PSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIP 1396
Score = 56.6 bits (135), Expect = 9e-08
Identities = 91/401 (22%), Positives = 119/401 (29%), Gaps = 62/401 (15%)
Query: 46 SPPAGPSNVPKFGSPKPPVAVKPSSEEKPDKEPKPPFLKPTGAGQRFGTP-ASLTTRDPE 104
SP G + P G+P P A PS K PP PT +P L T P+
Sbjct: 1135 SPKGGLATPPPKGAPTTPAATPPSP--KGGLATPPPKGAPTTPAATPPSPKGGLATPSPK 1192
Query: 105 AKVGFLKPVGPKP---INLPKEDSKPTFP--WPPGNK-----PSLHSVNQDHDLKPLGPK 154
P P + P PT P PP K PS P PK
Sbjct: 1193 GAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPK 1252
Query: 155 SGPTPPTSENEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKPAFGQKPPLSTENSHEDES 214
GP P + +KG + P P P + P ++
Sbjct: 1253 GGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTP 1312
Query: 215 PMKNVSSSKGSPAPLGVRSKSGPLKPAREDSENKDHAGEISSLPFPGVVLKPAASRGGPG 274
P S KGSP K P PA K P + +S+GGP
Sbjct: 1313 PAATPPSPKGSPGT--PPPKGAPTPPAVTPPSPKGT---------PTLPATTPSSKGGPT 1361
Query: 275 LSKNGEEKKEDRKIDAAKNTFQSKINQEELASGTPPARFPKAPSKLTVGGPWGQSQEKEK 334
+ E + K PA P +P + G + K
Sbjct: 1362 TPSSKEGPTPPAATPSHKGG---------------PAMTPPSPKR-------GPAIPSPK 1399
Query: 335 GDKNSA-----TPKQKPLPPLFTLG----------PPPPKPNRPPNVDLTKFHKTSSGNS 379
GD S +PK+ P P+ G PP P T K
Sbjct: 1400 GDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATP 1459
Query: 380 TSKGQTSYSTTSLPPPPPSHPASQPPLPASHPSQPPVPSLP 420
+SKG + + PP P PA + +S P + P P
Sbjct: 1460 SSKGDPTLPAVT-PPSPKEPPAPKQVATSSSPKKAPATPAP 1499
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 71.6 bits (174), Expect = 3e-12
Identities = 113/432 (26%), Positives = 151/432 (34%), Gaps = 40/432 (9%)
Query: 26 PNSSSGIQARKNLFNNQGNASPPAGPSNVPKFGSPKPPVAVKPSSEEKPDKEPKPPFLKP 85
P + S AR++ P PS P+ + P +V +SE EP P +
Sbjct: 169 PGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTT-EPSPAARRR 227
Query: 86 TGAGQRFGTPASLTTRDPEAKVGFLKPVGPKPINLPKEDSKPTFPWPPG----NKPSLHS 141
AG PAS + + GP P+ + P+ P P G P +
Sbjct: 228 PSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTP 287
Query: 142 VNQDHD--LKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKPAFG 199
+D L PL TP S Q QA P L Q P PL P P+
Sbjct: 288 PRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAP-PSPS 346
Query: 200 QKPPLSTENSHEDESPMKNVSSSKGSPAPLGVRS--KSGPLKPAREDSENKDHAGEISSL 257
P L T S +P ++S GSP S S PL P A + L
Sbjct: 347 APPSLQTLPS-PPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPL 405
Query: 258 PFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELASGTPPARFPKAP 317
P P AS L+ + + + F + A +PPA P +P
Sbjct: 406 QAPP---SPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSP 462
Query: 318 SKL-------TVGGPWGQ---SQEKEKGDKNSATPKQKPLPPLFTLGPP----PPKPNRP 363
S ++ P Q S SATP + PPL PP P P P
Sbjct: 463 SATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPL--AAPPLQLAKPPPQAP 520
Query: 364 PNVDLTKFHKTSSGNSTSKGQTSYS-TTSLP------PPPPSHPASQPPLPASHPSQPPV 416
P + S ++ GQ +S + SLP PPP + P PL PS P
Sbjct: 521 PALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPAS 580
Query: 417 PSL-PPRNIKPP 427
P+L PR +PP
Sbjct: 581 PTLQAPR--RPP 590
Score = 59.3 bits (142), Expect = 1e-08
Identities = 102/440 (23%), Positives = 153/440 (34%), Gaps = 64/440 (14%)
Query: 8 GNPTEDVSVNSRPFRVTGPNSSSGIQARKNLFNNQGNASPPAGPSNVPKFGSPKPPVAVK 67
G+P V RV G ++G RK L G P + P+ G P
Sbjct: 31 GSPRPPPPVTPAALRVLG---AAGAVGRKPLAERAGGIGGATIPESAPRAG----PTRSA 83
Query: 68 PSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRDPEAKVGFLK------PVGPKPINLP 121
+S P P +G G+R PA T+ P + G P+G K + +
Sbjct: 84 GTSSRNPASRPPA-----SGRGER-APPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRIS 137
Query: 122 KEDSKPTFPWPPGNKPSLHSVNQDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKFM 181
E++ K S S D SGPTP T A + + G +
Sbjct: 138 AEETVARGKATEAPKRSALSAGARRDT------SGPTPGTPS----PAMARRSRAAGTEV 187
Query: 182 SASQDLEPKPLFPKPAFGQKPPLSTENSHEDESPMKNVSSSKGSPAPLGVRSKSGPL-KP 240
P+PA +P TE + S S+++ SPA S G L +P
Sbjct: 188 G----------LPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRP 237
Query: 241 AREDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKIN 300
A + S+ P ++RG P + + K + + A + +
Sbjct: 238 ASRSLSS-------SATPLSSPARSGPSARGTPRAPAHPSQPKP-KGLQALRPPQVTPPR 289
Query: 301 QEELASGTPPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPP--PP 358
++ PA P + S L P + + + ATP L P PP
Sbjct: 290 KD-----AAPALGPLSSSPLATPSP-SAALQSQAPPTLPATPHSSSLTCQLATPLPLAPP 343
Query: 359 KPNRPPNVDLTKFHKTS--SGNSTSKGQ-TSYSTTSLPPPPPSHPASQPPLPASHPSQPP 415
P+ PP++ + S +TS G T +T S P PP P + PP P PP
Sbjct: 344 SPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPP-----PQAPP 398
Query: 416 VPSLPPRNIKPPFDLKSPVN 435
+LPP P P++
Sbjct: 399 ALALPPLQAPPSPPASPPLS 418
Score = 42.0 bits (97), Expect = 0.002
Identities = 84/395 (21%), Positives = 121/395 (30%), Gaps = 73/395 (18%)
Query: 25 GPNSSSGIQARKNLFNNQGNASP--PAGP---SNVPKFGSPKPPVAVKPSSEEKPDKEPK 79
GP SSS + Q A P PA P S + +P P PS+ P
Sbjct: 297 GPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPS 356
Query: 80 PPFLKPTGAGQRFGTPASLTTRDPEAKVGFLKPVGPKPINLPKEDSKPTFPWPPGNKPSL 139
PP P+ A G+P T FL P+ P + P PP P
Sbjct: 357 PPATPPSQATTSLGSPTLQATHS------FLPSPPLSPLATPPPQAPPALALPPLQAPPS 410
Query: 140 HSVNQDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKPAFG 199
+ PL P + P+P + + L P P P+
Sbjct: 411 PPASP-----PLSPLATPSPQAPN------------------ALAVHLLQAPFSPPPS-- 445
Query: 200 QKPPLSTENSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKPAREDSENKDHAGEISSLPF 259
PP+ S SP + S++ S AP SL
Sbjct: 446 --PPVQAPFS-PPASPPVSPSATPPSQAP--------------------------PSLAA 476
Query: 260 PGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELASGTPPAR-FPKAPS 318
P + + P+ P + + A Q A TPP + P P+
Sbjct: 477 PPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPA 536
Query: 319 KLTVGGPWGQSQEKEKGDKNSATPKQKPL--PPLFTLGPPPPKPNRPPNVDLTKFHKTSS 376
P+ S + P+ P+ PL + PP P P + + T
Sbjct: 537 SFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQV---PPSPPASPTLQAPRRPPTPG 593
Query: 377 GNSTSKGQTSYSTTSLPPPPPSHPASQPPLPASHP 411
+++ G T +L P PP P+ P S P
Sbjct: 594 PDTSVSGPR--LTLALAPGPPPPPSRSPSSTLSGP 626
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 70.5 bits (171), Expect = 6e-12
Identities = 94/342 (27%), Positives = 131/342 (38%), Gaps = 82/342 (23%)
Query: 189 PKPLFPKPAFGQKPPLSTENSHEDESPMKNVSS--SKGSPAPLGVRSKSGPLKPAREDSE 246
P P P P + PP PM +V S S G G +GP+ AR
Sbjct: 652 PPPEAPSPF--RAPPF------HPPGPMPSVGSMPSAGPMPSAGPMPSAGPVPSARPGPP 703
Query: 247 NK-DHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELA 305
+H G L PG+V P GP + G ED +
Sbjct: 704 TTANHLG----LSVPGLVSVPPRLLPGPENHRAGSN--EDPIL---------------AP 742
Query: 306 SGTPPARFPKAPSKLTVGG----PWGQSQEKEKGDK----------NSATPKQKPLPPLF 351
SGTPP P P T GG P +KE+ +S + LPPL
Sbjct: 743 SGTPP---PTIPPDETFGGRVPRPAFVHYDKEEASDVEISLESDSDDSVVIVPEGLPPL- 798
Query: 352 TLGPPPPKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPP----PPSHPASQPPLP 407
PPPP PP + T T S P P P PA+ PLP
Sbjct: 799 --PPPPPSGATPPPI----------------APTGPPTASPPVPAKEEPEELPAAPGPLP 840
Query: 408 ASHPSQPPVP---SLPPRNIKP---PFDLKSPVNEDNQDGVTHSDGAGNLDEEQDSEGET 461
P PPVP +LPP + P P P E++ + + DEE++ E E
Sbjct: 841 PPPPPPPPVPGPVTLPPPQLVPEGTPGGGGPPALEEDLTVININSS----DEEEEEEEEE 896
Query: 462 YEDIEASKEREKKREKEEKKRLELEKKEQKEKEKKEQEIKKK 503
E+ E +E E+ E+EE+ E ++E++E+E+ E+E +++
Sbjct: 897 EEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEE 938
Score = 56.6 bits (135), Expect = 9e-08
Identities = 93/430 (21%), Positives = 147/430 (34%), Gaps = 145/430 (33%)
Query: 110 LKPVGPK---PINLPKEDSKPTF---PW-PPGNKPSLHSVNQDHDLKPLGP--------K 154
L+P+GP P +P ++ F P+ PPG PS+ S+ + GP
Sbjct: 638 LQPMGPTCPTPAPVPPPEAPSPFRAPPFHPPGPMPSVGSMPSAGPMPSAGPMPSAGPVPS 697
Query: 155 SGPTPPTSENEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKPAFGQKPPLSTENSHEDES 214
+ P PPT+ N + P L V P L P P +H S
Sbjct: 698 ARPGPPTTANHLGLSVPGLVSV------------PPRLLPGP-----------ENHRAGS 734
Query: 215 PMKNVSSSKGSPAPLGVRSKSGPLKPAREDSENKDHAGEISSLPFPGVVLKPAASRGG-- 272
+ + G+P P + P + GG
Sbjct: 735 NEDPILAPSGTPPP----------------------------------TIPPDETFGGRV 760
Query: 273 --PGLSKNGEEKKEDRKIDAAKNTFQSKINQEELASGTPPARFPKAPSKLTVGGPWGQSQ 330
P +E+ D +I ++ S + E G PP P PS
Sbjct: 761 PRPAFVHYDKEEASDVEISLESDSDDSVVIVPE---GLPPLP-PPPPS------------ 804
Query: 331 EKEKGDKNSATPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTT 390
ATP PP+ GPP P P + + +
Sbjct: 805 --------GATP-----PPIAPTGPPTASPPVPAKEE--------------PEELPAAPG 837
Query: 391 SLPPPPPSHPASQPPLPASHPSQPPVPSLPPR------------------NIKPPFDLKS 432
LPPPPP PP P P P P L P NI + +
Sbjct: 838 PLPPPPP------PPPPVPGPVTLPPPQLVPEGTPGGGGPPALEEDLTVININSSDEEEE 891
Query: 433 PVNEDNQDGVTHSDGAGNLDEEQDSEGETYEDIEASKEREKKREKEEKKRLELEKKEQKE 492
E+ ++ + + +EE++ E E +E E +E E+ E+ E++ ELE++E++E
Sbjct: 892 EEEEEEEEEEEEEEEEEDFEEEEEDEEEYFE--EEEEEEEEFEEEFEEEEGELEEEEEEE 949
Query: 493 KEKKEQEIKK 502
E++E+E+++
Sbjct: 950 DEEEEEELEE 959
Score = 37.4 bits (85), Expect = 0.054
Identities = 30/103 (29%), Positives = 42/103 (40%), Gaps = 12/103 (11%)
Query: 347 LPPLFTLGP------PPPKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHP 400
+PPL +GP P P P P FH S ++ S P P + P
Sbjct: 635 VPPLQPMGPTCPTPAPVPPPEAPSPFRAPPFHPPGPMPSVGSMPSAGPMPSAGPMPSAGP 694
Query: 401 ASQ----PPLPASH--PSQPPVPSLPPRNIKPPFDLKSPVNED 437
PP A+H S P + S+PPR + P + ++ NED
Sbjct: 695 VPSARPGPPTTANHLGLSVPGLVSVPPRLLPGPENHRAGSNED 737
Score = 30.0 bits (66), Expect = 8.6
Identities = 74/360 (20%), Positives = 111/360 (30%), Gaps = 76/360 (21%)
Query: 43 GNASPPAGPSNVPKFGSPKPPVAVKPSSEEKPDKE-PKPPFLKPTGAGQRFGTPASLTTR 101
G PP P+ P + PPV K EE P P PP P
Sbjct: 805 GATPPPIAPTGPP---TASPPVPAKEEPEELPAAPGPLPPPPPP---------------- 845
Query: 102 DPEAKVGFLKPVGPKPINLPKEDSKPTFPWPPGNKPSLHSVNQDHDLKPLGPKSGPTPPT 161
P P P+ LP P G P+L + DL + S
Sbjct: 846 ---------PPPVPGPVTLPPPQLVPEGTPGGGGPPAL-----EEDLTVININSSDEEEE 891
Query: 162 SENEQKQAFPKLTGVKGKFMSASQD--------LEPKPLFPKPAFGQKPPLSTENSHEDE 213
E E+++ + + F +D E + F + ++ L E EDE
Sbjct: 892 EEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDE 951
Query: 214 SPMKNVSS-------------SKGSPAPLGV-RSKSGPLKPAREDSENKDHAGEISSLPF 259
+ + +G+P P + + P P + E + G + +
Sbjct: 952 EEEEELEEVEDLEFGTAGGEVEEGAPPPPTLPPALPPPESPPKVQPEPEPEPGLLLEVEE 1011
Query: 260 PGVV----LKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELASGT------- 308
PG A + L GE ++E AA Q + +E A T
Sbjct: 1012 PGTEEERGADTAPTLAPEALPSQGEVEREGES-PAAGPPPQELVEEEPSAPPTLLEEETE 1070
Query: 309 -------PPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKPN 361
PP P A ++ QEKE+ D + PP PPP +P+
Sbjct: 1071 DGSDKVQPPPETP-AEEEMETETEAEALQEKEQDDTAAMLADFIDCPPDDEKPPPPTEPD 1129
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 69.3 bits (168), Expect = 1e-11
Identities = 112/450 (24%), Positives = 147/450 (32%), Gaps = 105/450 (23%)
Query: 24 TGPNSSSGIQARKNLFNNQGNASPPAGPSNVPKFGSPKPPVAVKPSSEEKPDKEPKPPFL 83
TG +S +A+ + PPA + P F S P + P +EP
Sbjct: 360 TGGSSGPPFKAQPQDSATFAHTPPPAQATPAPGFKSAFSPYQTPVAHFPPPPEEPTATAA 419
Query: 84 ---KPTGAGQRFGTPASLTTRDPEAKVGFLKPVGPKP--INLPKEDSKPTFPWPPGNKPS 138
+ +G +R P L +P AK P GP P N + +PTF W P
Sbjct: 420 FGARDSGEFRRAPAPPPLPPAEPLAKEKPGTPPGPPPPDTNSMELGGRPTFGWSPE---- 475
Query: 139 LHSVNQDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKPAF 198
P P PT E+ + + ++ K LF +
Sbjct: 476 --------------PCDSPGTPTLESSPAGPEKPHDSLDSRIEMLLKEQRTKLLFLR--- 518
Query: 199 GQKPPLSTENSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKPAREDSENKDHAGE-ISSL 257
+P TE E SP+ + SS AP G S+ G P S E IS
Sbjct: 519 --EPDSDTELQMEG-SPISSSSSQLSPLAPFGTNSQPGFRGPTPPSSRPSSTGLEDISPT 575
Query: 258 PFP----------GVVLKPAASRGGP------------GLSKNGEEKKEDRKIDAAKNTF 295
P P G+ +P G P L G+ K+D + +
Sbjct: 576 PLPDSDEDEELDLGLGPRPPPEPGPPDPAGLLSQTAEVALDLVGDRTPTSEKMDEGQQSS 635
Query: 296 --QSKINQEELASG-------------TPPARFPKAPSKLTVGGPWGQSQEKEKGDKNSA 340
+I+ +E+ S TP A APS L P
Sbjct: 636 GEDMEISDDEMPSAPITSADCPKPMVVTPGAAAVAAPSVLAPTLPL------------PP 683
Query: 341 TPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHP 400
P PLPP PPPP+P P L PPPPP+HP
Sbjct: 684 PPGFPPLPP--PPPPPPPQPGFPMPPPLPP--------------------PPPPPPPAHP 721
Query: 401 A---SQPPLPASHPSQPPVPSLPPRNIKPP 427
A PPLPA P PP P LPP PP
Sbjct: 722 AVTVPPPPLPAP-PGVPPPPILPPLPPFPP 750
Score = 47.4 bits (111), Expect = 5e-05
Identities = 76/335 (22%), Positives = 117/335 (34%), Gaps = 39/335 (11%)
Query: 94 TPASLTTRDPEAKVGFLKPVGPKPINLP-KEDSKPTFPWPPGNKPSLHSVNQDHDLKPLG 152
TP L RDP+ +P P ++ +ED K + + ++ + +
Sbjct: 1005 TPCELAKRDPKGVGVRRRPARPLELDSGGEEDEKESLSEEQESTEEEEEAEEEEEEEDDD 1064
Query: 153 PKSGPTPPTSENEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKPAFGQKPPLSTENSHED 212
SEN+ + L+ K S + E + A S+E+S +
Sbjct: 1065 DDDSDDRDESENDDEDT--ALSEASEKDEGDSDEEETVSIVTSKAEATSSSESSESSEFE 1122
Query: 213 ESPMKNVSSSKGSPAPLGVRSKSGPLKPAREDSENKDHAGEISSLPFPGVVLKPAASRGG 272
S + SSS+ + ARE+ E ++ ++ + AS G
Sbjct: 1123 SSSESSPSSSEDEEEVV-----------AREEEEEEEEEEMVAE--------ESMASAGP 1163
Query: 273 PGLSKNGEEKK---EDRKIDAAKNTFQSKINQEELASGTPPARFPKAPSKLTVGGPWGQS 329
++GEE +D+ + I E +A P+ + P + V P S
Sbjct: 1164 EDFEQDGEEAALAPGAPAVDSLGMEEEVDIETEAVAPEERPSMLDEPPLPVGVEEP-ADS 1222
Query: 330 QE--KEKGDKNSATPKQKPLPPLFTLGPPPP-KPNRPPNVDLTKFHKTSSGNSTSKGQTS 386
+E +E G P PP + PP P R P DL +
Sbjct: 1223 REPPEEPGLSQEGAMLLSPEPPAKEVEARPPLSPERAPEHDLEVEPEPPMMLPLPL---- 1278
Query: 387 YSTTSLPPPPPSHPASQPPLP----ASHPSQPPVP 417
LPPP P P S PP P ASHPS PP P
Sbjct: 1279 --QPPLPPPRPPRPPSPPPEPETTDASHPSVPPEP 1311
Score = 46.2 bits (108), Expect = 1e-04
Identities = 96/437 (21%), Positives = 146/437 (33%), Gaps = 81/437 (18%)
Query: 61 KPPVAVKPSSEEKPDKEPKPPFLKPTGAGQRFGTP----ASLTTRDPEAKVGFLKPVGPK 116
+PP++ + + E + EP+PP + P P +PE V P+
Sbjct: 1251 RPPLSPERAPEHDLEVEPEPPMMLPLPLQPPLPPPRPPRPPSPPPEPETTDASHPSVPPE 1310
Query: 117 PI-------------NLPKEDSKPTFPWPPGNKPSLHSVNQDHDLKPLGPKSGPTPPTSE 163
P+ +L K S T P PG +P L + L S P P S
Sbjct: 1311 PLAEDHPPHTPGLCGSLAKSQSTETVPATPGGEPPLSGGSSGLSL------SSPQVPGSP 1364
Query: 164 NEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKPA---FGQKPPLSTENSHEDESPMKN-V 219
P L+ G + +D P F +P+ PL T E P+ + V
Sbjct: 1365 FSYPAPSPSLSS-GGLPRTPGRDFSFTPTFSEPSGPLLLPVCPLPTGRRDERSGPLASPV 1423
Query: 220 SSSKGSPAPLGVRSKSGPLKPAREDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNG 279
G P PL + PA ++ + + P P ++ P AS P K G
Sbjct: 1424 LLETGLPLPLPLPLPLPLALPAVLRAQAR------APTPLPPLLPAPLASCPPPMKRKPG 1477
Query: 280 EEKKEDRKI-----DAAKNTFQSKINQEELASGTPPAR--FPKAPSKLTVGGPWGQSQEK 332
++ + + + + +E L P FP TV +
Sbjct: 1478 RPRRSPPSMLSLDGPLVRPPAGAALGRELLLLPGQPQTPVFPSTHDPRTVTLDF------ 1531
Query: 333 EKGDKNSATPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSL 392
+N+ P P PP L P PP P PP V+ TK N + + ++
Sbjct: 1532 ----RNAGIP--APPPP---LPPQPPPPPPPPPVEPTKLPFKELDN-------QWPSEAI 1575
Query: 393 PPPPPSH---------------PASQPPLPASHPSQPPVPSLPPRNIKPPFDLKSPVNED 437
PP P P +PP PP S + PP L P +E
Sbjct: 1576 PPGPRGRDEVTEEYMELAKSRGPWRRPPKKRHEDLVPPAGS---PELSPPQPLFRPRSEF 1632
Query: 438 NQDGVTHSDGAGNLDEE 454
+ + + G +DEE
Sbjct: 1633 EEMTILYDIWNGGIDEE 1649
Score = 33.5 bits (75), Expect = 0.78
Identities = 25/128 (19%), Positives = 52/128 (40%), Gaps = 17/128 (13%)
Query: 567 VEIDYDSLKLKKDSLGAPSRPIEDDQEVYDDVAEQDDISSHSQSGSGGIFPPPPDDDIYD 626
+E+D + +K+SL E+++E ++ E+DD DDD D
Sbjct: 1027 LELDSGGEEDEKESLSEEQESTEEEEEAEEEEEEEDD-----------------DDDDSD 1069
Query: 627 GIEEEDADDGFPAPPKQLDMGDEVYDDVDTSDFPVSSAEMSQGTNVGKAKTEEKDLKKLK 686
+E + DD A + + + D+ +T S AE + + ++ E +
Sbjct: 1070 DRDESENDDEDTALSEASEKDEGDSDEEETVSIVTSKAEATSSSESSESSEFESSSESSP 1129
Query: 687 KQEKEEKD 694
++E++
Sbjct: 1130 SSSEDEEE 1137
Score = 31.6 bits (70), Expect = 3.0
Identities = 16/73 (21%), Positives = 34/73 (46%)
Query: 427 PFDLKSPVNEDNQDGVTHSDGAGNLDEEQDSEGETYEDIEASKEREKKREKEEKKRLELE 486
P +L S ED ++ ++ + +EE + E E +D + + + E +++ E
Sbjct: 1026 PLELDSGGEEDEKESLSEEQESTEEEEEAEEEEEEEDDDDDDSDDRDESENDDEDTALSE 1085
Query: 487 KKEQKEKEKKEQE 499
E+ E + E+E
Sbjct: 1086 ASEKDEGDSDEEE 1098
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 68.2 bits (165), Expect = 3e-11
Identities = 105/402 (26%), Positives = 141/402 (35%), Gaps = 58/402 (14%)
Query: 43 GNASPPAGPSNVPKFGSPKPPVAVKPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRD 102
G AS GP+ + P P++V SS P P P G G P
Sbjct: 239 GAASSVGGPNGGKQHPPPTTPISV--SSSGASGAPPTKPPTTPVGGGNLPSAPPPANF-- 294
Query: 103 PEAKVGFLKPVGPKPINLPKEDSKPTFPWP-PGNKPSLHSVNQDHDLKPLGPKSGPT--- 158
P P +P+N P PG+ PS H++ Q P GP+ GPT
Sbjct: 295 PHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAP 354
Query: 159 -----PPTSEN--EQKQAFP------KLTGVKGKFMSASQDLEPKP---LFPKPAFGQKP 202
PP S + FP S+S P P P P
Sbjct: 355 SPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPP 414
Query: 203 PLSTENSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKP--AREDSENKDHAGEISSLPFP 260
P S S++ P K S S A V S+ P P R + + H G PFP
Sbjct: 415 PTSLSVSNQ---PPKYTQPSLPSQA---VWSQGPPPPPPYGRLLANSNAHPG-----PFP 463
Query: 261 GVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELASGTPPARFPKAPSKL 320
A S P +S + ++ ++ + Q + Q SG PP
Sbjct: 464 PST--GAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPP---------- 511
Query: 321 TVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKPNR--PPNVDLTKFHKTSSGN 378
P E G + A P P L +L P PP P PP+ ++ +G
Sbjct: 512 ----PGAFPHPLEGGSSHHAHPYAMS-PSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGP 566
Query: 379 STSKGQTSYSTTSLPPPPPSHPA-SQPPLPASHPSQPPVPSL 419
S S S+TS P SHP+ SQ P A +P PPVP++
Sbjct: 567 PVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPF-PPVPTV 607
Score = 67.0 bits (162), Expect = 6e-11
Identities = 117/522 (22%), Positives = 176/522 (33%), Gaps = 74/522 (14%)
Query: 42 QGNASPPAGPSNVPKFGSPKPPVAVKPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTR 101
QG P GP P P ++ P+S P + P+ + + + +S ++
Sbjct: 337 QGMGGLPPGPEKGPTLAPS--PHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSS 394
Query: 102 D----------PEAKVGFLKPVGPKPINLPKEDSKPTFP----WPPGNKP----SLHSVN 143
P F P N P + ++P+ P W G P N
Sbjct: 395 SASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLAN 454
Query: 144 QDHDLKPLGPKSGPT----PPTSENEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKPAFG 199
+ P P +G PP S + + + + Q P P
Sbjct: 455 SNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGA 514
Query: 200 QKPPLSTENSHEDESPMKNVSSSKGSPAPLGVR-----------SKSGPLKPAREDSENK 248
PL +SH + S P P G S++GP P S N
Sbjct: 515 FPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNS 574
Query: 249 DHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELASGT 308
+ S P P+ S+G G A +T + + +G
Sbjct: 575 SSSTSQGSYPCS----HPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSP--AGY 628
Query: 309 PPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKP-LPPLFTLGPPPPKPNRPPNVD 367
A P P P+G+ K + P KP PP F G PP P
Sbjct: 629 KTASPPGPP-------PYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAG 681
Query: 368 LTKFHKTSSGNSTSKGQTSYSTTSLP--PPPPSHPASQPPLPASHPSQPPV--------P 417
F K S + LP PPPP+ PAS PPL A+ Q P P
Sbjct: 682 PGTF-KPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESP 740
Query: 418 SLPPRNIKPP---FDLKSPVNEDNQDGVTHSDGAGNLDEEQDSEGETYEDIEASKER--- 471
P R+ PP D+ S ++ + H D N D E + +K+R
Sbjct: 741 VPPARSPSPPPKVVDVPSHASQSARFN-KHLDRGFNSCARSDLYFVPLEGSKLAKKRADL 799
Query: 472 --EKKREKEEKKRLELEKKEQKEKEK-----KEQEIKKKFKL 506
+ +RE E++ R E E++ ++E+EK KE+E+++ KL
Sbjct: 800 VEKVRREAEQRAREEKEREREREREKEREREKERELERSVKL 841
Score = 42.7 bits (99), Expect = 0.001
Identities = 94/427 (22%), Positives = 130/427 (30%), Gaps = 84/427 (19%)
Query: 7 GGNPTEDVSVNSRPFRVTGPNSSSGIQARKNLFNNQGNASPPAGPSNVPKFGSPKPPVAV 66
G + D+ ++R T P+ S + ++ G + PA P + P P P
Sbjct: 117 GSSDPRDIDQDNRS---TSPSIYSPGSVENDSDSSSGLSQGPARPYHPPPLFPPSP---- 169
Query: 67 KPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRDPEAKVGFLKPVGPKPINLPKEDSK 126
+ PD P+ P AS G+ P+ P P
Sbjct: 170 -----QPPDSTPRQP-------------EASFEPHPSVTPTGYHAPMEP-----PTSRMF 206
Query: 127 PTFPWPPGNKPSLHSVNQDHDLK--PLGPKSGPTPPT--SENEQKQAFPKLTGVKGKFMS 182
P P P L+ L P+GPK G + N KQ P T +
Sbjct: 207 QAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSG 266
Query: 183 ASQDLEPKPLFPKPAFGQKPPLSTENSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKPAR 242
AS KP P+ N P + P P +R PL A
Sbjct: 267 ASGAPPTKP--------PTTPVGGGNLPSAPPPANFPHVTPNLPPPPALR----PLNNAS 314
Query: 243 EDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQE 302
+ + P PG + P A G G G EK +
Sbjct: 315 ASPPG------LGAQPLPGHLPSPHAMGQGMGGLPPGPEK------GPTLAPSPHSLPPA 362
Query: 303 ELASGTPPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPK--- 359
++ PP RFP + S + S S P + LP PPP
Sbjct: 363 SSSAPAPPMRFPYSSSSSSSAA--ASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSV 420
Query: 360 PNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPP---------SHPASQPP-LPAS 409
N+PP K+ + S + Q PPPPP +HP PP A
Sbjct: 421 SNQPP-----KYTQPSLPSQAVWSQ------GPPPPPPYGRLLANSNAHPGPFPPSTGAQ 469
Query: 410 HPSQPPV 416
+ PPV
Sbjct: 470 STAHPPV 476
Score = 32.7 bits (73), Expect = 1.3
Identities = 35/132 (26%), Positives = 43/132 (32%), Gaps = 31/132 (23%)
Query: 324 GPWGQSQEKEKGDKNSATPKQKPLPPLFTL-----GPPPPKPNRPPNVDLTKFHKTSSGN 378
GP G G N P P+ G PP KP P GN
Sbjct: 234 GPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKPPTTP---------VGGGN 284
Query: 379 STSKGQTS---YSTTSLPPPPPSHP----ASQPP----------LPASHPSQPPVPSLPP 421
S + + T +LPPPP P ++ PP LP+ H + LPP
Sbjct: 285 LPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPP 344
Query: 422 RNIKPPFDLKSP 433
K P SP
Sbjct: 345 GPEKGPTLAPSP 356
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 68.2 bits (165), Expect = 3e-11
Identities = 105/402 (26%), Positives = 141/402 (35%), Gaps = 58/402 (14%)
Query: 43 GNASPPAGPSNVPKFGSPKPPVAVKPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRD 102
G AS GP+ + P P++V SS P P P G G P
Sbjct: 239 GAASSVGGPNGGKQHPPPTTPISV--SSSGASGAPPTKPPTTPVGGGNLPSAPPPANF-- 294
Query: 103 PEAKVGFLKPVGPKPINLPKEDSKPTFPWP-PGNKPSLHSVNQDHDLKPLGPKSGPT--- 158
P P +P+N P PG+ PS H++ Q P GP+ GPT
Sbjct: 295 PHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAP 354
Query: 159 -----PPTSEN--EQKQAFP------KLTGVKGKFMSASQDLEPKP---LFPKPAFGQKP 202
PP S + FP S+S P P P P
Sbjct: 355 SPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPP 414
Query: 203 PLSTENSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKP--AREDSENKDHAGEISSLPFP 260
P S S++ P K S S A V S+ P P R + + H G PFP
Sbjct: 415 PTSLSVSNQ---PPKYTQPSLPSQA---VWSQGPPPPPPYGRLLANSNAHPG-----PFP 463
Query: 261 GVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELASGTPPARFPKAPSKL 320
A S P +S + ++ ++ + Q + Q SG PP
Sbjct: 464 PST--GAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPP---------- 511
Query: 321 TVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKPNR--PPNVDLTKFHKTSSGN 378
P E G + A P P L +L P PP P PP+ ++ +G
Sbjct: 512 ----PGAFPHPLEGGSSHHAHPYAMS-PSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGP 566
Query: 379 STSKGQTSYSTTSLPPPPPSHPA-SQPPLPASHPSQPPVPSL 419
S S S+TS P SHP+ SQ P A +P PPVP++
Sbjct: 567 PVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPF-PPVPTV 607
Score = 67.0 bits (162), Expect = 6e-11
Identities = 117/522 (22%), Positives = 176/522 (33%), Gaps = 74/522 (14%)
Query: 42 QGNASPPAGPSNVPKFGSPKPPVAVKPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTR 101
QG P GP P P ++ P+S P + P+ + + + +S ++
Sbjct: 337 QGMGGLPPGPEKGPTLAPS--PHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSS 394
Query: 102 D----------PEAKVGFLKPVGPKPINLPKEDSKPTFP----WPPGNKP----SLHSVN 143
P F P N P + ++P+ P W G P N
Sbjct: 395 SASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLAN 454
Query: 144 QDHDLKPLGPKSGPT----PPTSENEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKPAFG 199
+ P P +G PP S + + + + Q P P
Sbjct: 455 SNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGA 514
Query: 200 QKPPLSTENSHEDESPMKNVSSSKGSPAPLGVR-----------SKSGPLKPAREDSENK 248
PL +SH + S P P G S++GP P S N
Sbjct: 515 FPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNS 574
Query: 249 DHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELASGT 308
+ S P P+ S+G G A +T + + +G
Sbjct: 575 SSSTSQGSYPCS----HPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSP--AGY 628
Query: 309 PPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKP-LPPLFTLGPPPPKPNRPPNVD 367
A P P P+G+ K + P KP PP F G PP P
Sbjct: 629 KTASPPGPP-------PYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAG 681
Query: 368 LTKFHKTSSGNSTSKGQTSYSTTSLP--PPPPSHPASQPPLPASHPSQPPV--------P 417
F K S + LP PPPP+ PAS PPL A+ Q P P
Sbjct: 682 PGTF-KPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESP 740
Query: 418 SLPPRNIKPP---FDLKSPVNEDNQDGVTHSDGAGNLDEEQDSEGETYEDIEASKER--- 471
P R+ PP D+ S ++ + H D N D E + +K+R
Sbjct: 741 VPPARSPSPPPKVVDVPSHASQSARFN-KHLDRGFNSCARSDLYFVPLEGSKLAKKRADL 799
Query: 472 --EKKREKEEKKRLELEKKEQKEKEK-----KEQEIKKKFKL 506
+ +RE E++ R E E++ ++E+EK KE+E+++ KL
Sbjct: 800 VEKVRREAEQRAREEKEREREREREKEREREKERELERSVKL 841
Score = 42.7 bits (99), Expect = 0.001
Identities = 94/427 (22%), Positives = 130/427 (30%), Gaps = 84/427 (19%)
Query: 7 GGNPTEDVSVNSRPFRVTGPNSSSGIQARKNLFNNQGNASPPAGPSNVPKFGSPKPPVAV 66
G + D+ ++R T P+ S + ++ G + PA P + P P P
Sbjct: 117 GSSDPRDIDQDNRS---TSPSIYSPGSVENDSDSSSGLSQGPARPYHPPPLFPPSP---- 169
Query: 67 KPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRDPEAKVGFLKPVGPKPINLPKEDSK 126
+ PD P+ P AS G+ P+ P P
Sbjct: 170 -----QPPDSTPRQP-------------EASFEPHPSVTPTGYHAPMEP-----PTSRMF 206
Query: 127 PTFPWPPGNKPSLHSVNQDHDLK--PLGPKSGPTPPT--SENEQKQAFPKLTGVKGKFMS 182
P P P L+ L P+GPK G + N KQ P T +
Sbjct: 207 QAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSG 266
Query: 183 ASQDLEPKPLFPKPAFGQKPPLSTENSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKPAR 242
AS KP P+ N P + P P +R PL A
Sbjct: 267 ASGAPPTKP--------PTTPVGGGNLPSAPPPANFPHVTPNLPPPPALR----PLNNAS 314
Query: 243 EDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQE 302
+ + P PG + P A G G G EK +
Sbjct: 315 ASPPG------LGAQPLPGHLPSPHAMGQGMGGLPPGPEK------GPTLAPSPHSLPPA 362
Query: 303 ELASGTPPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPK--- 359
++ PP RFP + S + S S P + LP PPP
Sbjct: 363 SSSAPAPPMRFPYSSSSSSSAA--ASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSV 420
Query: 360 PNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPP---------SHPASQPP-LPAS 409
N+PP K+ + S + Q PPPPP +HP PP A
Sbjct: 421 SNQPP-----KYTQPSLPSQAVWSQ------GPPPPPPYGRLLANSNAHPGPFPPSTGAQ 469
Query: 410 HPSQPPV 416
+ PPV
Sbjct: 470 STAHPPV 476
Score = 32.7 bits (73), Expect = 1.3
Identities = 35/132 (26%), Positives = 43/132 (32%), Gaps = 31/132 (23%)
Query: 324 GPWGQSQEKEKGDKNSATPKQKPLPPLFTL-----GPPPPKPNRPPNVDLTKFHKTSSGN 378
GP G G N P P+ G PP KP P GN
Sbjct: 234 GPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKPPTTP---------VGGGN 284
Query: 379 STSKGQTS---YSTTSLPPPPPSHP----ASQPP----------LPASHPSQPPVPSLPP 421
S + + T +LPPPP P ++ PP LP+ H + LPP
Sbjct: 285 LPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPP 344
Query: 422 RNIKPPFDLKSP 433
K P SP
Sbjct: 345 GPEKGPTLAPSP 356
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 67.8 bits (164), Expect = 4e-11
Identities = 103/439 (23%), Positives = 153/439 (34%), Gaps = 84/439 (19%)
Query: 8 GNPTEDVSVNSRPFRVTGPNSSSGIQARKNLFNNQGNASPPAGPSNVPKFGSPKPPVAVK 67
G+P V RV G ++G RK L G P + P+ G P
Sbjct: 31 GSPRPPPPVTPAALRVLG---AAGAVGRKPLAERAGGIGGATIPESAPRAG----PTRSA 83
Query: 68 PSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRDPEAKVGFLK------PVGPKPINLP 121
+S P P +G G+R PA T+ P + G P+G K + +
Sbjct: 84 GTSSRNPASRPPA-----SGRGER-APPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRIS 137
Query: 122 KEDSKPTFPWPPGNKPSLHSVNQDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKFM 181
E++ K S S D SGPTP T A + + G +
Sbjct: 138 AEETVARGKATEAPKRSALSAGARRDT------SGPTPGTPS----PAMARRSRAAGTEV 187
Query: 182 SASQDLEPKPLFPKPAFGQKPPLSTENSHEDESPMKNVSSSKGSPAPLGVRSKSGPL-KP 240
P+PA +P TE + S S+++ SPA S G L +P
Sbjct: 188 G----------LPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRP 237
Query: 241 AREDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKIN 300
A + S+ P ++RG P + + K + + A + +
Sbjct: 238 ASRSLSS-------SATPLSSPARSGPSARGTPRAPAHPSQPKP-KGLQALRPPQVTPPR 289
Query: 301 QEELASGTPPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPP---- 356
++ PA P + S L P G N+ATP LPP L P
Sbjct: 290 KD-----AAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLA 344
Query: 357 PPKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPPLPASHPSQ--P 414
PP P+ PP++ +LP PP + P+ PP + P Q P
Sbjct: 345 PPSPSAPPSLQ-----------------------TLPSPPATPPSQAPPSMTTPPMQAPP 381
Query: 415 PVPSLPPRNIKPPFDLKSP 433
+ ++PP I+ P L SP
Sbjct: 382 SLQTIPP--IQVPHSLTSP 398
Score = 48.5 bits (114), Expect = 2e-05
Identities = 99/414 (23%), Positives = 129/414 (31%), Gaps = 50/414 (12%)
Query: 42 QGNASPPAGPSNVPKFGSPKPPVAVKPSSEEKPDKEPKPPF----LKPTGAGQRFGTPAS 97
+G PA PS PK PK A++P P K+ P P GT A
Sbjct: 260 RGTPRAPAHPSQ-PK---PKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKAR 315
Query: 98 LTTRDPEAKVGFLKPVGPKPINLPKEDSKPTFPWPPGNKPSLHSVNQDHDLKPL-GPKSG 156
A + P P P P P P PSL ++ P P S
Sbjct: 316 PVPPPDNAATPLPATLPPSP---PLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSM 372
Query: 157 PTPPTSENEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKPAFGQ----KPPLSTENSHED 212
TPP Q P + V S S P PL P L +S
Sbjct: 373 TTPPMQAPPSLQTIPPIQ-VPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLT 431
Query: 213 ESPMKNVSSSKGSPAPLGVRSKSGPLKPAREDSENKDHAGEISSLPFPGVVLKPAASRGG 272
SP + +S P S PL+ + + P L PA S
Sbjct: 432 MSPRQTQASLTSPSRPASTPPDSPPLQAPLS----------LPASPPLQTSLSPAVSPLS 481
Query: 273 PGLSKNGEEKKEDRKIDAAKNTFQSKINQE-ELASGTPPARFPKAPSKLTVGGPWGQSQE 331
L+ + + + + S I E S P P+ LT +
Sbjct: 482 SPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLT-------TPP 534
Query: 332 KEKGDKNSATPKQKPLPPLFTLG---PPPPKP---NRPPNVDLTKFHKTSSGNSTSKGQT 385
E + P Q PL T PP P P PP+ T +T S +T Q
Sbjct: 535 LENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQA 594
Query: 386 SYSTTSLP----PPPPSHPASQPPLPASHPSQPPVPSLPPRNIKPPFDLKSPVN 435
+ S P P PP P + PP P PP +LPP P P++
Sbjct: 595 PPALASPPLQGLPSPPLSPLATPP-----PQAPPXLALPPLQAPPSPPASPPLS 643
Score = 43.9 bits (102), Expect = 6e-04
Identities = 83/333 (24%), Positives = 108/333 (32%), Gaps = 46/333 (13%)
Query: 45 ASPPAGPSNVPKFGSP----KPPVAVKPSSEEKPDKEPK---PPFLKPTGAGQRFGTPAS 97
ASPP PS P +P PP+ V PS P P PP + P A P S
Sbjct: 712 ASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPS 771
Query: 98 LTTRDPEAKVGFLKPVGPKPINLPKEDSKPTFPWPPGNKPSLHSVNQDHDLKPLGPKSGP 157
P + + P P + P + P+ PP + P + L P+ P + P
Sbjct: 772 PPASLPMSPLAKPPPQAPPALATPPLQALPS---PPASFPGQAPFSPSASL-PMSPLATP 827
Query: 158 TPPTSENEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKP-------------AFGQKPPL 204
P + A P L S + +P P P A G PP
Sbjct: 828 PP---QAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPP 884
Query: 205 STENSHEDESPMKNVSSSKGSPAPLGVRS-KSGP-----LKPAREDSENKDHAGEISSLP 258
S S P SS + P +R SGP P + H S P
Sbjct: 885 SRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGP 944
Query: 259 FPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELASGTP-PARFPKAP 317
P P A RG PG D +++ E S TP P P
Sbjct: 945 AP-----PLAFRGAPGAPLPWPPATGPGSADGLCTIYET----EGPESATPAPGALDPGP 995
Query: 318 SKLTVGGPWGQSQEKEKGDKNSATPKQKPLPPL 350
S T G G++ +S +PKQ L L
Sbjct: 996 SPGTSG---GKAAAGAGAGASSRSPKQARLGEL 1025
Score = 42.7 bits (99), Expect = 0.001
Identities = 99/441 (22%), Positives = 135/441 (30%), Gaps = 57/441 (12%)
Query: 18 SRPFRVTGPNSSSGIQARKNLFNNQGNASPPAGPSNVPKFGSPKPPVAVKP-----SSEE 72
SRP + P S +QA +L ASPP S P P+ + P S
Sbjct: 445 SRP--ASTPPDSPPLQAPLSL-----PASPPLQTSLSPAVSPLSSPLTIHPLQALSSLAS 497
Query: 73 KPDKEPKPPFLKPTGAGQRFGTPASLTTRDPEAKVGFLKPVGPKPINLPKEDSKPTFPWP 132
+ P + P Q P SL T P + P ++ P+ P
Sbjct: 498 HSPQAPLSSLIMPPLETQSSLAPPSLQTP-------------PASLTTPPLENLPSLAPP 544
Query: 133 PGNKPSLHSVNQDHDLKPL-------GPKSGPTPPTSENEQKQAFPKLTGVKGKFMSASQ 185
P S + P P S T P E A P Q
Sbjct: 545 PLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQ 604
Query: 186 DLEPKPLFP-------KPAFGQKPPLSTENSHEDESPMKNVSS-SKGSPAPLGVRSKSGP 237
L PL P P PPL S P+ +++ S +P L V P
Sbjct: 605 GLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAP 664
Query: 238 LKPAREDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQS 297
P + S P S+ P L+ + + +
Sbjct: 665 FSPPPSPPVQAPFSPPASPPVSPSAT---PPSQAPPSLAAPPLQVPPSPPASPPMSPSAT 721
Query: 298 KINQEELASGTPPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPP 357
Q PP + P +P P + +A P Q P P +L P
Sbjct: 722 PPPQAPPPLAAPPLQVPPSPPASPPMSP-SATPPPRVPPLLAAPPLQVPPSPPASLPMSP 780
Query: 358 ---PKPNRPPNVDLTKFHKTSSGNSTSKGQTSYS-TTSLP------PPPPSHPASQPPLP 407
P P PP + S ++ GQ +S + SLP PPP + P PL
Sbjct: 781 LAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLL 840
Query: 408 ASHPSQPPVPSL-PPRNIKPP 427
PS P P+L PR +PP
Sbjct: 841 QVPPSPPASPTLQAPR--RPP 859
Score = 42.0 bits (97), Expect = 0.002
Identities = 75/297 (25%), Positives = 97/297 (32%), Gaps = 25/297 (8%)
Query: 151 LGPKSGPTPPTS------ENEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKPAFGQKPPL 204
L P S TPP S EN A P L + + P P P P PL
Sbjct: 518 LAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPA-PCPLQAPPSPL 576
Query: 205 ST---ENSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKPAREDSENKDHAGEISSLPFPG 261
+T E +P + SP G+ S PL P + A +LP
Sbjct: 577 TTPPPETPSSIATPPPQAPPALASPPLQGLPSP--PLSPL---ATPPPQAPPXLALPPLQ 631
Query: 262 VVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELASGTPPARFPKAPSKLT 321
P AS L+ + + + F + A +PPA P +PS
Sbjct: 632 APPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSAT- 690
Query: 322 VGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKPNRP---PNVDLTKFHKTSSGN 378
P Q+ P PP+ PPP+ P P + + S
Sbjct: 691 ---PPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPM 747
Query: 379 STSKGQTSYSTTSLPPPPPSHPASQPP-LPASHPSQPPVPSLPPRNIKPPFD-LKSP 433
S S L PP P S P LP S ++PP P PP PP L SP
Sbjct: 748 SPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPP-PQAPPALATPPLQALPSP 803
Score = 40.4 bits (93), Expect = 0.006
Identities = 80/371 (21%), Positives = 115/371 (30%), Gaps = 43/371 (11%)
Query: 48 PAGPSNVPKFGSPKP---PVAVKPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRDPE 104
P P+ P P P P PSS P + P P G + L T P+
Sbjct: 561 PPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQ 620
Query: 105 AKVGFLKPVGPKPINLPKEDSKPTFPWPPGNKPSLHSVNQDHDLK-PLGPKSGPTPPTSE 163
A P P + P P P+ +V H L+ P P P+PP
Sbjct: 621 APPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAV---HLLQAPFSPP--PSPPVQA 675
Query: 164 NEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKPAFGQKPPLSTENSHEDESPMKNVSSSK 223
A P ++ A L PL P+ PP+S + ++P +
Sbjct: 676 PFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAP-- 733
Query: 224 GSPAPLGVRSKSGPLKPAREDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKK 283
PL V P + + + P V P AS L+K
Sbjct: 734 ----PLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPP--- 786
Query: 284 EDRKIDAAKNTFQSKINQEELASGTPPAR-FPKAPSKLTVGGPWGQSQEKEKGDKNSATP 342
Q A TPP + P P+ P+ S + P
Sbjct: 787 -----------------QAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPP 829
Query: 343 KQKPL--PPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHP 400
+ P+ PL + PP P P + + T +++ G T +L P PP P
Sbjct: 830 QAPPVLAAPLLQV---PPSPPASPTLQAPRRPPTPGPDTSVSGPR--LTLALAPGPPPPP 884
Query: 401 ASQPPLPASHP 411
+ P S P
Sbjct: 885 SRSPSSTLSGP 895
Score = 38.9 bits (89), Expect = 0.019
Identities = 76/331 (22%), Positives = 103/331 (31%), Gaps = 57/331 (17%)
Query: 47 PPAGPSNVPKFGSPKPPVAVKPSSEEKP-DKEPKPPFLKPTG--------AGQRFGTPAS 97
PP+ P++ P S PP V P P P PP P A TP
Sbjct: 738 PPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPL 797
Query: 98 LTTRDPEAKVGFLKPVGP------KPINLPKEDSKPTFPWP-------PGNKPSLHSVNQ 144
P A P P P+ P + P P P P+L + +
Sbjct: 798 QALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRR 857
Query: 145 ----DHDLKPLGPK------SGPTPPTSENEQKQ-AFPKLTGVKGKFMSASQDLEPKPLF 193
D GP+ GP PP S + + P L G S ++L
Sbjct: 858 PPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSG 917
Query: 194 PKPAFGQKPPLSTENSHEDESPMKNVSSSKGSPAPLGVRSKSG---PLKPAREDSENK-- 248
P+ PP E + + S+G PL R G P PA
Sbjct: 918 PEGGAAASPPPDAE-----LAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGL 972
Query: 249 ----DHAGEISSLPFPGVVLKPAASRG--------GPGLSKNGEEKKEDRKIDAAKNTFQ 296
+ G S+ P PG L P S G G G + K+ R + Q
Sbjct: 973 CTIYETEGPESATPAPG-ALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGELPLGALQ 1031
Query: 297 SKINQEELASGTPPARFPKAPSKLTVGGPWG 327
+ + Q L S T + + + GGP G
Sbjct: 1032 ASVVQ-HLLSRTLLLAAAEGAAGGSGGGPGG 1061
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 67.8 bits (164), Expect = 4e-11
Identities = 134/643 (20%), Positives = 227/643 (35%), Gaps = 56/643 (8%)
Query: 104 EAKVGFLKPVGPKPINLPKEDSKPTFPWPPGNKPSLH-SVNQDHDLKPLGPKSGPTPPTS 162
E ++GF GP P +LP + P P S H V + +K + T
Sbjct: 410 ECRIGF----GPIPFSLP--EGLPKIP-----SVSTHIKVKSEEKIKVVEKSEKETVIVE 458
Query: 163 EN-EQKQAFPKLTGVKGKFMSASQDLEPKPLFPKPAFGQKPPLSTENSHEDESPMKNVSS 221
E E+ Q ++T + K + E + + A G + + + E SP K S
Sbjct: 459 EQTEETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEGGEEETKSPPAEEAASPEKEAKS 518
Query: 222 SKGSPAPLGVRSKSGPLKPAREDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEE 281
P+ +KS PA S K+ A + + P PA E
Sbjct: 519 ------PVKEEAKS----PAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPE 568
Query: 282 KKEDRKIDAAKNTFQSKINQEELASGTPPARFP---KAPSKLTVGGPWGQSQEKEKGDKN 338
K+E + K+ ++K +E A A+ P K+P K P ++ K+
Sbjct: 569 KEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKS 628
Query: 339 SATPK--QKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPP 396
A K +K P P K P + K S + + +
Sbjct: 629 PAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEA 688
Query: 397 PSHPASQPPLPASHPSQPPVPSLPPRNIKPPFDLKSPVNEDNQDGVTHSDGAGNLDEEQD 456
S ++ P+ S S K P KSPV E+ + T + EE
Sbjct: 689 KSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAK---TPEKAKSPVKEEAK 745
Query: 457 SEGETYEDIEAS----KEREKKREKEEKKRLELEKKEQKEKEKKEQEIKKKFKLTGPIQV 512
S + +A K E K +E+ R +K +K K ++E+K K P++
Sbjct: 746 SPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKE 805
Query: 513 IHLAKACCDVKGGKNELSFKQGEQIEIIRITDNPEGKWLGRTARGSYGYIKTTAVEIDYD 572
A K + + K+ E+ + +++ + P+ + T E D
Sbjct: 806 DAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPA-------TPKTEEKKD 858
Query: 573 SLKLKKDSLGAPSRPIEDDQEVYDDVAEQDDISSHSQSGSGGIFPPPPDDDIYDGIE-EE 631
S K + AP +E+ +E + ++ + + + P P+ + +E +E
Sbjct: 859 SKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKE 918
Query: 632 DADDGFPAPPKQLDMGDEVYDDVDTSDFPVSSAEMSQGTNVGKAKTEEKDLKKLKKQEKE 691
DA P ++ ++ + DD + P AE + A E+KD K+ K ++ E
Sbjct: 919 DAK-----PKEKTEVAKKEPDDAKAKE-PSKPAEKKE------AAPEKKDTKEEKAKKPE 966
Query: 692 EK-DFRKKFKYDGEIRVLYSTKVTTSITSKKWGTRDLQVKPGE 733
EK K K D + +K K T KP E
Sbjct: 967 EKPKTEAKAKEDDKTLSKEPSKPKAEKAEKSSSTDQKDSKPPE 1009
Score = 46.6 bits (109), Expect = 9e-05
Identities = 104/484 (21%), Positives = 176/484 (36%), Gaps = 70/484 (14%)
Query: 45 ASPPAGPSNVPKFGSPKPPVAVKPSSEEKPDKEP--KPPFLKPTGAGQRFGTPASLTTRD 102
A PA + K SP A P + P+KE P +K + ++ +PA +
Sbjct: 538 AKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVK---SPEKAKSPAKEEAKS 594
Query: 103 P-EAKVGFLKPVGPKPINLP-KEDSKPTFPWPPGNKPSLHSVNQDHDLKPLGPKSGPTPP 160
P EAK P+ P KE++K P ++K PT
Sbjct: 595 PAEAK-------SPEKAKSPVKEEAKSP---AEAKSPVKEEAKSPAEVKSPEKAKSPTKE 644
Query: 161 TSENEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKPAFGQKPPLSTE--NSHEDESPMKN 218
+++ +K P+ K A ++ + P+ A K P+ E + + +SP+K
Sbjct: 645 EAKSPEKAKSPEKEEAKSP-EKAKSPVKAEAKSPEKA---KSPVKAEAKSPEKAKSPVKE 700
Query: 219 VSSSKG---SPAPLGVRSKSGPLKPAREDSENKDHAGEISSLPFPGVVLKPAASRGGPGL 275
+ S SP +S P +E+++ + A P P ++ P
Sbjct: 701 EAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKS----PVKEEAKSPEKAKS-PEK 755
Query: 276 SKNGEEKKEDRKIDAAKNTFQSKINQEELASGTPPARFP---KAPSKLTVGGPWGQSQEK 332
+K + K + K A +EE S P +FP K+P K V P EK
Sbjct: 756 AKTLDVKSPEAKTPA----------KEEARS--PADKFPEKAKSPVKEEVKSP-----EK 798
Query: 333 EKGD-KNSATPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTS 391
K K A +K +P + P + +P V + + K + T +
Sbjct: 799 AKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPA--TPKTEEK 856
Query: 392 LPPPPPSHPASQPPLPASHPSQPPVPSLPPRNIKPPFDLKSPVNEDNQDGVT-HSDGAGN 450
P + P P + P P + + K ED + T +
Sbjct: 857 KDSKKEEAPKKEAPKPKVEEKKEPAVEKPKES---KVEAKKEEAEDKKKVPTPEKEAPAK 913
Query: 451 LDEEQDSEGETYEDI-----------EASKEREKKREKEEKKRLELEKKEQKEKEKKEQE 499
++ ++D++ + ++ E SK EKK EKK + E+K +K +EK + E
Sbjct: 914 VEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTK-EEKAKKPEEKPKTE 972
Query: 500 IKKK 503
K K
Sbjct: 973 AKAK 976
Score = 35.8 bits (81), Expect = 0.16
Identities = 57/264 (21%), Positives = 95/264 (35%), Gaps = 19/264 (7%)
Query: 61 KPPVAVKPSSEEK---PDKEP---KPPFLKPTGAGQRFGTPASLTTRDPEAKVGFLKPVG 114
K P A P+ EE DK P K P + + ++ +P + PE ++ + V
Sbjct: 762 KSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEV- 820
Query: 115 PKPINLPKEDSKPTFPWPPGNK-----PSLHSVNQDHDLKPL-GPKSGPTPPTSENEQKQ 168
P+ ++ + PP P+ + D K PK P E +++
Sbjct: 821 KSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEP 880
Query: 169 AFPKLTGVKGKFMSASQDLEPKPLFPKPAFGQKPPLSTENSHEDESPMKNVSSSKGSPAP 228
A K + K + ++ E K P P ++ P E ED P + +K P
Sbjct: 881 AVEKPK--ESKVEAKKEEAEDKKKVPTPE--KEAPAKVEVK-EDAKPKEKTEVAKKEPDD 935
Query: 229 LGVRSKSGPLKPAREDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKI 288
+ S P + E KD E + P + A LSK + K + K
Sbjct: 936 AKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPKTEAKAKEDDKTLSKEPSKPKAE-KA 994
Query: 289 DAAKNTFQSKINQEELASGTPPAR 312
+ + +T Q E A+ A+
Sbjct: 995 EKSSSTDQKDSKPPEKATEDKAAK 1018
Score = 30.4 bits (67), Expect = 6.6
Identities = 51/236 (21%), Positives = 80/236 (33%), Gaps = 44/236 (18%)
Query: 46 SPPAGPSNVPKFGSPKPPVAVKPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRDPE- 104
SP + P+ PK P EE+ +E K +P + PA+ T + +
Sbjct: 801 SPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVK--EPPKKAEEEKAPATPKTEEKKD 858
Query: 105 -AKVGFLKPVGPKP---------INLPKE----------DSKPTFPWPPGNKPSLHSVNQ 144
K K PKP + PKE + K P P P+ V +
Sbjct: 859 SKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKE 918
Query: 145 DHDLKPLGPKSGPTP-------PTSENEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKPA 197
D K + P P+ E+K+A P+ K E K P+
Sbjct: 919 DAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTK----------EEKAKKPE-- 966
Query: 198 FGQKPPLSTENSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKPAREDSENKDHAGE 253
+KP + +D++ K S K A + KP + +E+K G+
Sbjct: 967 --EKPKTEAKAKEDDKTLSKEPSKPKAEKAEKSSSTDQKDSKPPEKATEDKAAKGK 1020
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 67.0 bits (162), Expect = 6e-11
Identities = 95/378 (25%), Positives = 137/378 (36%), Gaps = 65/378 (17%)
Query: 35 RKNLFNNQGNASPPAGPSNVPKFGSP----KPPVAVKPSSEEKPDKEPKPPFLKPTGAGQ 90
R ++ + + PP + P SP PPV P +P P PP P G
Sbjct: 173 RPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPV---PGGPRQPSPGPTPPPF-PGNRGT 228
Query: 91 RFG----TPASLTTRDPEAKVGFLKPVGPKPINLPKEDSKPTFPWPP-GNKPSLHSVNQD 145
G + L++ P + L P + + D KP P PP GN+PS+H
Sbjct: 229 ALGGGSIRQSPLSSSSPFSNRPPLPPTPSRAL-----DDKPPPPPPPVGNRPSIH----- 278
Query: 146 HDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKPAFGQKPPLS 205
+ P P PP + + P+ SAS P P P P+ PPL
Sbjct: 279 REAVP------PPPPQNNKPPVPSTPR--------PSASSQAPPPP--PPPSRPGPPPLP 322
Query: 206 TENSHEDES---PMKNVSSSKGSPAPLGVRSKSGPLKP---AREDSENKDHAGEISSLPF 259
+S DE+ P +N+S S +P PL +SGPL P R +D G LP
Sbjct: 323 PSSSGNDETPRLPQRNLSLSSSTP-PLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPP 381
Query: 260 PGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELASGTPPARFPKAPSK 319
P P +S+NG R + A S+ + SG P P P +
Sbjct: 382 P------------PPVSRNG---STSRALPATPQ-LPSRSGVDSPRSGPRP---PLPPDR 422
Query: 320 LTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNS 379
+ G P + +P + F P P P V TK + + +
Sbjct: 423 PSAGAPPPPPPSTSIRNGFQDSPCEDEWESRFYFHPISDLPPPEPYVQTTKSYPSKLARN 482
Query: 380 TSKGQTSYSTTSLPPPPP 397
S+ ++ PP PP
Sbjct: 483 ESRSGSNRRERGAPPLPP 500
Score = 51.2 bits (121), Expect = 4e-06
Identities = 78/311 (25%), Positives = 107/311 (34%), Gaps = 86/311 (27%)
Query: 132 PPG-------NKPSLHSV-NQDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKFMSA 183
PPG P L S N+D+D G + PP + + F +G G+F
Sbjct: 97 PPGLGGLFQAGMPKLRSTANRDNDSG--GSRPPLLPPGGRSTSAKPFSPPSG-PGRFPVP 153
Query: 184 S---QDLEPKPLF-----PKPAFGQKPPLSTENSHEDESPMKNVSSSKGSP-APLGVRSK 234
S + P+P P+P G KP P+++ ++GSP P G R
Sbjct: 154 SPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQP 213
Query: 235 S-GPLKPAREDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKN 293
S GP P PFPG + GG +
Sbjct: 214 SPGPTPP-----------------PFPG---NRGTALGGGSIR----------------- 236
Query: 294 TFQSKINQEELASGTPPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTL 353
QS ++ S PP P PS+ P G++ S + P
Sbjct: 237 --QSPLSSSSPFSNRPP--LPPTPSRALDDKP--PPPPPPVGNRPSIHREAVP------- 283
Query: 354 GPPPPKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPPLPASHPSQ 413
PPPP+ N+PP S + S S+ + PPPPP PPLP S
Sbjct: 284 -PPPPQNNKPP--------------VPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGN 328
Query: 414 PPVPSLPPRNI 424
P LP RN+
Sbjct: 329 DETPRLPQRNL 339
Score = 50.8 bits (120), Expect = 5e-06
Identities = 58/235 (24%), Positives = 85/235 (36%), Gaps = 31/235 (13%)
Query: 45 ASPPAGPSN--VPKFGSPKPPVAVKPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRD 102
A PP P N P +P+P + + P P PP L P+ +G T R
Sbjct: 281 AVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGN------DETPRL 334
Query: 103 PEAKVGFLKPVGPKPINLPKEDSKPTFPWPPGNKPSLHSVNQDHDLKPLGPKSGPTPPTS 162
P+ + P LP P PP +P + PL P P P +
Sbjct: 335 PQRNLSLSSSTPP----LPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPP---PPPVSR 387
Query: 163 ENEQKQAFPKLTGVKGKFMSASQDLEPKPLFP--KPAFGQKPP----LSTENSHEDESPM 216
+A P + + S P+P P +P+ G PP S N +D SP
Sbjct: 388 NGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPSTSIRNGFQD-SPC 446
Query: 217 KNVSSSK---------GSPAPLGVRSKSGPLKPAREDSENKDHAGEISSLPFPGV 262
++ S+ P P +KS P K AR +S + + E + P P +
Sbjct: 447 EDEWESRFYFHPISDLPPPEPYVQTTKSYPSKLARNESRSGSNRRERGAPPLPPI 501
Score = 50.4 bits (119), Expect = 6e-06
Identities = 92/382 (24%), Positives = 128/382 (33%), Gaps = 80/382 (20%)
Query: 58 GSPKPPVAVKP--SSEEKPDKEPKPPFLKPTGA-GQRFGTPASLTTRDPEAKVGFLKPVG 114
G +PP+ S+ KP P P P + G R G P R P + VG
Sbjct: 122 GGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPR----PDVG 177
Query: 115 PKPINLPKEDSKPTFPWPPGNKPSLHSVNQDHDLKPLGPKS---GPTPPTSENEQKQAFP 171
KP ++P P+ P P + P N+ P GP+ GPTPP FP
Sbjct: 178 SKPDSIPPP--VPSTPRPIQSSPH----NRGSPPVPGGPRQPSPGPTPPP--------FP 223
Query: 172 KLTGVKGKFMSASQDLEPKPLFPKPAFGQKPPLSTENSHE-DESPMKNVSSSKGSPAPLG 230
G +G + + PL F +PPL S D+ P P P
Sbjct: 224 ---GNRGTALGGGS-IRQSPLSSSSPFSNRPPLPPTPSRALDDKP---------PPPPPP 270
Query: 231 VRSKSGPLKPAREDSENKDHAGEISSLPFPGVVLK-----PAASRGGPGLSKNGEEKKED 285
V ++ + A +++ + S P P + P SR GP ++
Sbjct: 271 VGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDE 330
Query: 286 RKIDAAKNTFQSKINQEELASGTPPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQK 345
+N L+S TPP P L P ++
Sbjct: 331 TPRLPQRNL--------SLSSSTPPLPSPGRSGPLP------------------PPPSER 364
Query: 346 PLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPP 405
P PP+ PP PP +++ TS + S S P P +PP
Sbjct: 365 PPPPV--RDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGP-----RPP 417
Query: 406 LPASHPS----QPPVPSLPPRN 423
LP PS PP PS RN
Sbjct: 418 LPPDRPSAGAPPPPPPSTSIRN 439
Score = 42.0 bits (97), Expect = 0.002
Identities = 61/258 (23%), Positives = 86/258 (33%), Gaps = 66/258 (25%)
Query: 224 GSPAPLGVRSKSGPLKPAREDSENKDHAGEISSLPFPG---VVLKPAASRGGPGL----- 275
G P LG ++G K + + D G L PG KP + GPG
Sbjct: 95 GGPPGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPS 154
Query: 276 --SKNGEEKKEDRKIDAAKNTFQSK--------------INQEELASGTPPARF-PKAPS 318
++G + + ++ + SK I G+PP P+ PS
Sbjct: 155 PGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPS 214
Query: 319 KLTVGGPW---------GQSQEKEKGDKNSATPKQKPLPP-----LFTLGPPPPKP--NR 362
P+ G S + +S + PLPP L PPPP P NR
Sbjct: 215 PGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNR 274
Query: 363 PPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSH---PASQPPLPASHPSQPPVPSL 419
P S ++PPPPP + P P P++ PP P
Sbjct: 275 P----------------------SIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPP 312
Query: 420 PPRNIKPPFDLKSPVNED 437
P R PP S N++
Sbjct: 313 PSRPGPPPLPPSSSGNDE 330
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 67.0 bits (162), Expect = 6e-11
Identities = 95/378 (25%), Positives = 137/378 (36%), Gaps = 65/378 (17%)
Query: 35 RKNLFNNQGNASPPAGPSNVPKFGSP----KPPVAVKPSSEEKPDKEPKPPFLKPTGAGQ 90
R ++ + + PP + P SP PPV P +P P PP P G
Sbjct: 173 RPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPV---PGGPRQPSPGPTPPPF-PGNRGT 228
Query: 91 RFG----TPASLTTRDPEAKVGFLKPVGPKPINLPKEDSKPTFPWPP-GNKPSLHSVNQD 145
G + L++ P + L P + + D KP P PP GN+PS+H
Sbjct: 229 ALGGGSIRQSPLSSSSPFSNRPPLPPTPSRAL-----DDKPPPPPPPVGNRPSIH----- 278
Query: 146 HDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKPAFGQKPPLS 205
+ P P PP + + P+ SAS P P P P+ PPL
Sbjct: 279 REAVP------PPPPQNNKPPVPSTPR--------PSASSQAPPPP--PPPSRPGPPPLP 322
Query: 206 TENSHEDES---PMKNVSSSKGSPAPLGVRSKSGPLKP---AREDSENKDHAGEISSLPF 259
+S DE+ P +N+S S +P PL +SGPL P R +D G LP
Sbjct: 323 PSSSGNDETPRLPQRNLSLSSSTP-PLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPP 381
Query: 260 PGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELASGTPPARFPKAPSK 319
P P +S+NG R + A S+ + SG P P P +
Sbjct: 382 P------------PPVSRNG---STSRALPATPQ-LPSRSGVDSPRSGPRP---PLPPDR 422
Query: 320 LTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNS 379
+ G P + +P + F P P P V TK + + +
Sbjct: 423 PSAGAPPPPPPSTSIRNGFQDSPCEDEWESRFYFHPISDLPPPEPYVQTTKSYPSKLARN 482
Query: 380 TSKGQTSYSTTSLPPPPP 397
S+ ++ PP PP
Sbjct: 483 ESRSGSNRRERGAPPLPP 500
Score = 51.2 bits (121), Expect = 4e-06
Identities = 78/311 (25%), Positives = 107/311 (34%), Gaps = 86/311 (27%)
Query: 132 PPG-------NKPSLHSV-NQDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKFMSA 183
PPG P L S N+D+D G + PP + + F +G G+F
Sbjct: 97 PPGLGGLFQAGMPKLRSTANRDNDSG--GSRPPLLPPGGRSTSAKPFSPPSG-PGRFPVP 153
Query: 184 S---QDLEPKPLF-----PKPAFGQKPPLSTENSHEDESPMKNVSSSKGSP-APLGVRSK 234
S + P+P P+P G KP P+++ ++GSP P G R
Sbjct: 154 SPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQP 213
Query: 235 S-GPLKPAREDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKN 293
S GP P PFPG + GG +
Sbjct: 214 SPGPTPP-----------------PFPG---NRGTALGGGSIR----------------- 236
Query: 294 TFQSKINQEELASGTPPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTL 353
QS ++ S PP P PS+ P G++ S + P
Sbjct: 237 --QSPLSSSSPFSNRPP--LPPTPSRALDDKP--PPPPPPVGNRPSIHREAVP------- 283
Query: 354 GPPPPKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPPLPASHPSQ 413
PPPP+ N+PP S + S S+ + PPPPP PPLP S
Sbjct: 284 -PPPPQNNKPP--------------VPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGN 328
Query: 414 PPVPSLPPRNI 424
P LP RN+
Sbjct: 329 DETPRLPQRNL 339
Score = 50.8 bits (120), Expect = 5e-06
Identities = 58/235 (24%), Positives = 85/235 (36%), Gaps = 31/235 (13%)
Query: 45 ASPPAGPSN--VPKFGSPKPPVAVKPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRD 102
A PP P N P +P+P + + P P PP L P+ +G T R
Sbjct: 281 AVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGN------DETPRL 334
Query: 103 PEAKVGFLKPVGPKPINLPKEDSKPTFPWPPGNKPSLHSVNQDHDLKPLGPKSGPTPPTS 162
P+ + P LP P PP +P + PL P P P +
Sbjct: 335 PQRNLSLSSSTPP----LPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPP---PPPVSR 387
Query: 163 ENEQKQAFPKLTGVKGKFMSASQDLEPKPLFP--KPAFGQKPP----LSTENSHEDESPM 216
+A P + + S P+P P +P+ G PP S N +D SP
Sbjct: 388 NGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPSTSIRNGFQD-SPC 446
Query: 217 KNVSSSK---------GSPAPLGVRSKSGPLKPAREDSENKDHAGEISSLPFPGV 262
++ S+ P P +KS P K AR +S + + E + P P +
Sbjct: 447 EDEWESRFYFHPISDLPPPEPYVQTTKSYPSKLARNESRSGSNRRERGAPPLPPI 501
Score = 50.4 bits (119), Expect = 6e-06
Identities = 92/382 (24%), Positives = 128/382 (33%), Gaps = 80/382 (20%)
Query: 58 GSPKPPVAVKP--SSEEKPDKEPKPPFLKPTGA-GQRFGTPASLTTRDPEAKVGFLKPVG 114
G +PP+ S+ KP P P P + G R G P R P + VG
Sbjct: 122 GGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPR----PDVG 177
Query: 115 PKPINLPKEDSKPTFPWPPGNKPSLHSVNQDHDLKPLGPKS---GPTPPTSENEQKQAFP 171
KP ++P P+ P P + P N+ P GP+ GPTPP FP
Sbjct: 178 SKPDSIPPP--VPSTPRPIQSSPH----NRGSPPVPGGPRQPSPGPTPPP--------FP 223
Query: 172 KLTGVKGKFMSASQDLEPKPLFPKPAFGQKPPLSTENSHE-DESPMKNVSSSKGSPAPLG 230
G +G + + PL F +PPL S D+ P P P
Sbjct: 224 ---GNRGTALGGGS-IRQSPLSSSSPFSNRPPLPPTPSRALDDKP---------PPPPPP 270
Query: 231 VRSKSGPLKPAREDSENKDHAGEISSLPFPGVVLK-----PAASRGGPGLSKNGEEKKED 285
V ++ + A +++ + S P P + P SR GP ++
Sbjct: 271 VGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDE 330
Query: 286 RKIDAAKNTFQSKINQEELASGTPPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQK 345
+N L+S TPP P L P ++
Sbjct: 331 TPRLPQRNL--------SLSSSTPPLPSPGRSGPLP------------------PPPSER 364
Query: 346 PLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPP 405
P PP+ PP PP +++ TS + S S P P +PP
Sbjct: 365 PPPPV--RDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGP-----RPP 417
Query: 406 LPASHPS----QPPVPSLPPRN 423
LP PS PP PS RN
Sbjct: 418 LPPDRPSAGAPPPPPPSTSIRN 439
Score = 42.0 bits (97), Expect = 0.002
Identities = 61/258 (23%), Positives = 86/258 (33%), Gaps = 66/258 (25%)
Query: 224 GSPAPLGVRSKSGPLKPAREDSENKDHAGEISSLPFPG---VVLKPAASRGGPGL----- 275
G P LG ++G K + + D G L PG KP + GPG
Sbjct: 95 GGPPGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPS 154
Query: 276 --SKNGEEKKEDRKIDAAKNTFQSK--------------INQEELASGTPPARF-PKAPS 318
++G + + ++ + SK I G+PP P+ PS
Sbjct: 155 PGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPS 214
Query: 319 KLTVGGPW---------GQSQEKEKGDKNSATPKQKPLPP-----LFTLGPPPPKP--NR 362
P+ G S + +S + PLPP L PPPP P NR
Sbjct: 215 PGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNR 274
Query: 363 PPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSH---PASQPPLPASHPSQPPVPSL 419
P S ++PPPPP + P P P++ PP P
Sbjct: 275 P----------------------SIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPP 312
Query: 420 PPRNIKPPFDLKSPVNED 437
P R PP S N++
Sbjct: 313 PSRPGPPPLPPSSSGNDE 330
>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
Length = 1838
Score = 64.3 bits (155), Expect = 4e-10
Identities = 127/489 (25%), Positives = 165/489 (33%), Gaps = 85/489 (17%)
Query: 24 TGPNSSSGIQARKNLFNNQGNASP---PAGPSNVPKFGSPKPPVAVKPSSEEKPDKEPKP 80
+G + G + ++ LF +G+ P P P V G P PP + + P P
Sbjct: 1194 SGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGP 1253
Query: 81 PFLKPTGAGQRFGTPASLTTRDPEAKVGFLKPVGPKPINLPKEDSKPTFPW---PPGNKP 137
P P G G P + + P +G VG K P E +P P PPG K
Sbjct: 1254 P--GPRGPS---GAPGADGPQGPPGGIGNPGAVGEK--GEPGEAGEPGLPGEGGPPGPKG 1306
Query: 138 SLHSVNQDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKPA 197
+ GP GP P ++ K + P G G D P P P PA
Sbjct: 1307 ERGEKGESGPSGAAGPP-GPKGPPGDDGPKGS-PGPVGFPG-------DPGP-PGEPGPA 1356
Query: 198 FGQKPPLSTENSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKPAREDSEN--KDHAGEIS 255
PP + + E G P P G K GP PA + K GE +
Sbjct: 1357 GQDGPP--GDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGE-A 1413
Query: 256 SLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELASGTPPARFPK 315
L P P +G PG K G + + ++ L G+P P
Sbjct: 1414 GLEGPPGKTGPIGPQGAPG--KPGPD---------GLRGIPGPVGEQGLP-GSPGPDGPP 1461
Query: 316 APSKLTVGGPWGQSQEKEKGDKNSATPK-QKPLPPLFTLGPPPPKPNRPPNVDLTKFHKT 374
P GP G G K + PK +K P L L PP + + L +
Sbjct: 1462 GPM-----GPPGLP-----GLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPG-PQG 1510
Query: 375 SSGNSTSKGQTSYSTTSLPPPPPSHPASQPPLP---------------ASHPSQPPVPSL 419
SSG +G T S PP PP P PP P A HP PP P
Sbjct: 1511 SSGPKGEQGITGPSGPIGPPGPPGLPG--PPGPKGAKGSSGPTGPKGEAGHPG-PPGPPG 1567
Query: 420 PPRNIKPPFDLKSPVNEDNQDGVTHSDGAGNLDEEQDSEGETYEDIEASKE------REK 473
PP + P +++ N D D D GE Y D E
Sbjct: 1568 PPGEVIQPLPIQASRTRRNIDASQLLD---------DGNGENYVDYADGMEEIFGSLNSL 1618
Query: 474 KREKEEKKR 482
K E E+ KR
Sbjct: 1619 KLEIEQMKR 1627
Score = 56.2 bits (134), Expect = 1e-07
Identities = 109/415 (26%), Positives = 139/415 (33%), Gaps = 79/415 (19%)
Query: 25 GPNSSSGIQARKNLFNNQGNASPPAGPSNVPKFGSPKPPVAVKPSSEEKPDKEPKPPFLK 84
GP G + L +G PP P G P P V P EP PP
Sbjct: 670 GPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQG------EPGPP--- 720
Query: 85 PTGAGQRFGTPASLTTRDPEAKVGFLKPVGPK-PINLPKEDSKPTFPWPPGNKPSLHSVN 143
GQ+ G P + P+ +G P G K P+ P P PPG+ P
Sbjct: 721 ----GQQ-GNPGAQGLPGPQGAIG---PPGEKGPLGKPGLPGMPGADGPPGH-PGKEG-- 769
Query: 144 QDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKPAFGQKPP 203
P G K G PP + +P GVKG + L K G+K
Sbjct: 770 ------PPGEKGGQGPPGPQG--PIGYPGPRGVKG--ADGIRGL-------KGTKGEK-- 810
Query: 204 LSTENSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKPAREDSENKDHA-----GEISSLP 258
E+ + +G P G R + GP P N D GE L
Sbjct: 811 --GEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLG 868
Query: 259 FPGVV-----LKPAASRGGPGL-SKNGEEKKEDRKIDAAKNTFQSKINQEELASGTPPAR 312
PG+ P S G PG NGE+ + T K T P R
Sbjct: 869 VPGLPGYPGRQGPKGSIGFPGFPGANGEK--------GGRGT-PGKPGPRGQRGPTGP-R 918
Query: 313 FPKAPSKLT-VGGPWGQSQEKEKGDKNSATPKQK-PLPPLFTLGPPPPK-PNRPPNVDLT 369
+ P +T GP G S GD + P ++ P P G P PK P PP D
Sbjct: 919 GERGPRGITGKPGPKGNS----GGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKD-- 972
Query: 370 KFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPPLPASHPSQP---PVPSLPP 421
G+ +G+T + + PP PP Q P + P P P PP
Sbjct: 973 ----GLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPP 1023
Score = 49.3 bits (116), Expect = 1e-05
Identities = 111/483 (22%), Positives = 142/483 (29%), Gaps = 78/483 (16%)
Query: 25 GPNSSSGIQARKNLFNNQGNASPPA-----GPSNVPKFGSPKPPVAVKPSSEEKPDKEPK 79
GP +G K G A PP GP F PK P P K
Sbjct: 922 GPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGP----PGPPGKDGLPGH 977
Query: 80 PPFLKPTGAGQRFGTPASLTTRDPEAKVGFLKPVG----PKPINLPKEDSKPTFPWPPGN 135
P TG + G P P+ G P+G P P P E P G
Sbjct: 978 PGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGT 1037
Query: 136 K--------------PSLHSVNQDHDLK-PLG---------PKSGPTPPTSENEQKQAFP 171
K P L D L P+G P P P S E+ A
Sbjct: 1038 KGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAGA 1097
Query: 172 K-LTGVKGKFMSASQDLEPKPLFPKPAFGQKPPLSTENSHEDESPMKNVSSSKGSPAPLG 230
G+ G+ P P K A G+K P + + G P+G
Sbjct: 1098 AGPIGIPGR---PGPQGPPGPAGEKGAPGEKGP-------------QGPAGRDGLQGPVG 1141
Query: 231 VRSKSGPLKPAREDSE--------NKDHAGEISSLPFPGVVLKPAASRGGPGLS-KNGEE 281
+ +GP+ P ED + K G+ PG P G PG S +GE
Sbjct: 1142 LPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPT-GPQGPIGQPGPSGADGEP 1200
Query: 282 KKEDRKIDAAKNTFQSKINQEELASGTPPARFPKAPSKLTVGGPWGQSQEK-EKGDKNSA 340
+ + F K ++ P FP P + + G G EK E GD
Sbjct: 1201 GPRGQ-----QGLFGQKGDE-------GPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQM 1248
Query: 341 TPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHP 400
P P P + P P PP G G+ PP P
Sbjct: 1249 GPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGER 1308
Query: 401 ASQPPLPASHPSQPPVPSLPPRNIKPPFDLKSPVNEDNQDGVTHSDGAGNLDEEQDSEGE 460
+ S + PP P PP + P PV G G D +G+
Sbjct: 1309 GEKGESGPSGAAGPPGPKGPPGD-DGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGD 1367
Query: 461 TYE 463
E
Sbjct: 1368 DGE 1370
Score = 42.0 bits (97), Expect = 0.002
Identities = 106/493 (21%), Positives = 165/493 (33%), Gaps = 71/493 (14%)
Query: 9 NPTEDVSVNS---RPFRVTGPNSSSGIQARKNLFNNQGNASPPAGPSNVPKFGSPKPPVA 65
+P +D++ P + T P + + I +N N +PP G G+
Sbjct: 350 SPYDDLTYGEGEENPDQPTDPGAGAEIPTSTADTSNSSNPAPPPGE------GADDLEGE 403
Query: 66 VKPSSEEKPDKEPKPPFLKPTGAGQRFGT--PASLTT--------RDPEAKVGFLKPVGP 115
+ D+ P+ PT + G PA+ T R + + G + P
Sbjct: 404 FTEETIRNLDENYYDPYYDPTSSPSEIGPGMPANQDTIYEGIGGPRGEKGQKGEPAIIEP 463
Query: 116 KPI--NLPKEDSKPTFPWPPGNKPSLHSVNQDHDLKPLGPKSGPTPPTSENEQKQAFPKL 173
+ P + P PPG ++ Q D GP P P ++ L
Sbjct: 464 GMLIEGPPGPEGPAGLPGPPG---TMGPTGQVGDPGERGPPGRPGLPGADG--------L 512
Query: 174 TGVKGKFMSASQDLEPKPLFPKPAFGQKPPLSTENSHEDESPMKNVSSSKGSPA-PLGVR 232
G G + + P G K P+ + + ++ ++ + PA P+G+
Sbjct: 513 PGPPGTML-----MLPFRFGGGGDAGSKGPMVSAQESQAQAILQQARLALRGPAGPMGLT 567
Query: 233 SKSGPLKPAREDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAK 292
+ GP+ P K G++ P V P G PG + G + + +
Sbjct: 568 GRPGPVGPPGSGG-LKGEPGDVGP-QGPRGVQGPPGPAGKPG--RRGRAGSDGARGMPGQ 623
Query: 293 NTFQSKINQEELAS--GTPPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKP--LP 348
+ + LA G R PS G P + E+GD P+ P
Sbjct: 624 TGPKGDRGFDGLAGLPGEKGHRGDPGPS----GPPGPPGDDGERGDDGEVGPRGLPGEPG 679
Query: 349 PLFTLGPP-PPKPNRPPNVDLTKFHKTSSGNSTSKG-------QTSYSTTSLP------- 393
P LGP PP P PP V GN +G Q + LP
Sbjct: 680 PRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIG 739
Query: 394 PPPPSHPASQPPLP----ASHPSQPPVPSLPP--RNIKPPFDLKSPVNEDNQDGVTHSDG 447
PP P +P LP A P P PP + + P + P+ GV +DG
Sbjct: 740 PPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADG 799
Query: 448 AGNLDEEQDSEGE 460
L + +GE
Sbjct: 800 IRGLKGTKGEKGE 812
Score = 40.0 bits (92), Expect = 0.008
Identities = 115/468 (24%), Positives = 145/468 (30%), Gaps = 79/468 (16%)
Query: 17 NSRPFRVTGPNSSSGIQARKNLFNNQGNASPPAGPSNVPKFGSPKPPVAVKPSSEEKPDK 76
N P GP G + L QG PP + K G P P A P P K
Sbjct: 710 NVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGH--PGK 767
Query: 77 EPKPPFLK----PTGAGQRFGTPASLTTRDPEAKVGFLKPVGPKPINLPKEDSKPTFPWP 132
E PP K P G G P + + G G K ED P F
Sbjct: 768 E-GPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEK-----GEDGFPGFKGD 821
Query: 133 PGNKPSLHSVNQD---HDLKPLGPKS--------GPTPPTSENEQKQAFPKLTGVKGK-- 179
G K + + P GPK GP P E + K P L G G+
Sbjct: 822 MGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGE-KGKLGVPGLPGYPGRQG 880
Query: 180 ---------FMSASQDLEPKPLFPKPA-FGQKPPLSTENSHEDESPMKNVSSSKGSPAPL 229
F A+ + + KP GQ+ P + G P P
Sbjct: 881 PKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGE-------RGPRGITGKPGPK 933
Query: 230 GVRSKSGPLKPAREDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKID 289
G GP P E N G FPG P G PG K+G ++
Sbjct: 934 GNSGGDGPAGPPGERGPN----GPQGPTGFPG----PKGPPGPPG--KDGLPGHPGQR-- 981
Query: 290 AAKNTFQSKINQEELASGTPPARFPKAPSKLTVGGPWGQSQEKEKGDKN-SATPKQKPLP 348
+ FQ K G P P+ P+ T GP G E+G P ++ LP
Sbjct: 982 -GETGFQGKTG----PPGPPGVVGPQGPTGET--GPMG-----ERGHPGPPGPPGEQGLP 1029
Query: 349 PLF----TLGPPPPK----PNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHP 400
L T G P P + PP + + G + G PP P P
Sbjct: 1030 GLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSP 1089
Query: 401 ASQPPLPASHPSQPPVPSLP-PRNIKPPFDLKSPVNEDNQDGVTHSDG 447
+ P A+ P +P P P+ P K E G DG
Sbjct: 1090 GERGPAGAAGPI--GIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDG 1135
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 62.0 bits (149), Expect = 2e-09
Identities = 110/426 (25%), Positives = 150/426 (35%), Gaps = 58/426 (13%)
Query: 26 PNSSSGIQARKNLFNNQGNASPPAGPSNVPKFGSPKPPVAVKPSSEEKPDKEPKPPFLKP 85
P + S AR++ P PS P+ + P +V +SE EP P +
Sbjct: 160 PGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTT-EPSPAARRR 218
Query: 86 TGAGQRFGTPASLTTRDPEAKVGFLKPVGPKPINLPKEDSKPTFPWPPGNKPSLHSVNQD 145
AG PAS + + GP P+ + P+ P P G
Sbjct: 219 PSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKG----------- 267
Query: 146 HDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKPAFGQKPPLS 205
L+ L P TPP +K A P L +S+S P P P P+ P L
Sbjct: 268 --LQALRPPQ-VTPP-----RKDAAPALGP-----LSSSPLATPSPSAP-PSPSAPPSLQ 313
Query: 206 TENSHEDESPMKNVSSSKGSPAPLGVRS--KSGPLKPAREDSENKDHAGEISSLPFPGVV 263
T S +P ++S GSP S S PL P A + L P
Sbjct: 314 TLPS-PPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPP-- 370
Query: 264 LKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELASGTPPARFPKAPSKL--- 320
P AS L+ + + + F + A +PPA P +PS
Sbjct: 371 -SPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPS 429
Query: 321 ----TVGGPWGQ---SQEKEKGDKNSATPKQKPLPPLFTLGPP----PPKPNRPPNVDLT 369
++ P Q S SATP + PPL PP P P PP +
Sbjct: 430 QAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPL--AAPPLQLAKPPPQAPPALATP 487
Query: 370 KFHKTSSGNSTSKGQTSYS-TTSLP------PPPPSHPASQPPLPASHPSQPPVPSL-PP 421
S ++ GQ +S + SLP PPP + P PL PS P P+L P
Sbjct: 488 PLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAP 547
Query: 422 RNIKPP 427
R +PP
Sbjct: 548 R--RPP 551
Score = 60.5 bits (145), Expect = 6e-09
Identities = 104/440 (23%), Positives = 152/440 (34%), Gaps = 103/440 (23%)
Query: 8 GNPTEDVSVNSRPFRVTGPNSSSGIQARKNLFNNQGNASPPAGPSNVPKFGSPKPPVAVK 67
G+P V RV G ++G RK L G P + P+ G
Sbjct: 31 GSPRPPPPVTPAALRVLG---AAGAVGRKPLAERAGGIGGATIPESAPRAG--------- 78
Query: 68 PSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRDPEAKVGFLK------PVGPKPINLP 121
P + +PP +G G+R PA T+ P + G P+G K + +
Sbjct: 79 ------PTRTSRPP---ASGRGER-APPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRIS 128
Query: 122 KEDSKPTFPWPPGNKPSLHSVNQDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKFM 181
E++ K S S D SGPTP T A + + G +
Sbjct: 129 AEETVARGKATEAPKRSALSAGARRDT------SGPTPGTPS----PAMARRSRAAGTEV 178
Query: 182 SASQDLEPKPLFPKPAFGQKPPLSTENSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKPA 241
+ P P+ +PP E P K+VSS+
Sbjct: 179 GLPR--------PAPSARPRPPT--------EGPRKSVSSAS------------------ 204
Query: 242 REDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQ 301
+H+ ++ P P +P+A GG G ++ R + ++ S
Sbjct: 205 -------EHS---TTEPSPAARRRPSA--GG------GLQRPASRSLSSSATPLSSPARS 246
Query: 302 EELASGTPPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKPLP--PLFTLGPP-PP 358
A GTP R P PS+ G + + A P PL PL T P PP
Sbjct: 247 GPSARGTP--RAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPP 304
Query: 359 KPNRPPNVDLTKFHKTS--SGNSTSKGQ-TSYSTTSLPPPPPSHPASQPPLPASHPSQPP 415
P+ PP++ + S +TS G T +T S P PP P + PP P PP
Sbjct: 305 SPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPP-----PQAPP 359
Query: 416 VPSLPPRNIKPPFDLKSPVN 435
+LPP P P++
Sbjct: 360 ALALPPLQAPPSPPASPPLS 379
Score = 46.6 bits (109), Expect = 9e-05
Identities = 76/371 (20%), Positives = 114/371 (30%), Gaps = 68/371 (18%)
Query: 44 NASPPAGPSNVPKFGSPKPPVAVKPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRDP 103
+A+P GP + +P P PS+ P PP P+ A G+P T
Sbjct: 282 DAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHS- 340
Query: 104 EAKVGFLKPVGPKPINLPKEDSKPTFPWPPGNKPSLHSVNQDHDLKPLGPKSGPTPPTSE 163
FL P+ P + P PP P + PL P + P+P
Sbjct: 341 -----FLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASP-----PLSPLATPSPQAPN 390
Query: 164 NEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKPAFGQKPPLSTENSHEDESPMKNVSSSK 223
+ + L P P P+ PP+ S SP + S++
Sbjct: 391 ------------------ALAVHLLQAPFSPPPS----PPVQAPFS-PPASPPVSPSATP 427
Query: 224 GSPAPLGVRSKSGPLKPAREDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKK 283
S AP SL P + + P+ P +
Sbjct: 428 PSQAP--------------------------PSLAAPPLQVPPSPPASPPMSPSATPPPQ 461
Query: 284 EDRKIDAAKNTFQSKINQEELASGTPPAR-FPKAPSKLTVGGPWGQSQEKEKGDKNSATP 342
+ A Q A TPP + P P+ P+ S + P
Sbjct: 462 APPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPP 521
Query: 343 KQKPL--PPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHP 400
+ P+ PL + PP P P + + T +++ G T +L P PP P
Sbjct: 522 QAPPVLAAPLLQV---PPSPPASPTLQAPRRPPTPGPDTSVSGPR--LTLALAPGPPPPP 576
Query: 401 ASQPPLPASHP 411
+ P S P
Sbjct: 577 SRSPSSTLSGP 587
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 62.0 bits (149), Expect = 2e-09
Identities = 95/387 (24%), Positives = 139/387 (35%), Gaps = 76/387 (19%)
Query: 61 KPPVAVKPSSEEKPDKEPKPPFLKPTGAG----QRFGTPASLTTRDPEAKVGFLKPVGPK 116
KP +KP +++P K P K G G Q+ GTP S++++ PE K+ P K
Sbjct: 202 KPEGIIKPPLQQQPPK----PIPKQQGPGRDPLQQDGTPKSISSQQPE-KIKSQPPGTGK 256
Query: 117 PINLPKEDSKPTFPWPPGNKPSLHSVNQDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGV 176
PI P + + DH PL + P T + + V
Sbjct: 257 PIQGPTQTPQT-----------------DHAKLPL-QRDASRPQTKQADI---------V 289
Query: 177 KGKFMSASQDLEPKPLFPKPAFGQKPPLSTENSHEDESPMKNVSSSKGSPAPLG------ 230
+G+ + S KP +P G+ P + P K + G PL
Sbjct: 290 RGESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTV 349
Query: 231 ---------VRSKSGPLKPAREDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKN--- 278
+ + PL PA+ ++ S P P + +P PG+ K
Sbjct: 350 KPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQP------PGVGKTPAQ 403
Query: 279 --GEEKKEDRKIDAAKNTFQSKINQEELASGTPPARFPKAPSKLTVGGPW-GQSQEKEKG 335
G K +++ K Q Q L S PA+ P P+K V P G+ ++ G
Sbjct: 404 QPGPAKPPTQQVGTPKPLAQ----QPGLQS---PAKAP-GPTKTPVQQPGPGKIPAQQAG 455
Query: 336 D-KNSATPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPP 394
K SA PP GP P P +P K G++ Q ST P
Sbjct: 456 PGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPA---KPPPQQPGSAKPPSQQPGSTKPPPQ 512
Query: 395 PP-PSHPASQPPLPASHPSQPPVPSLP 420
P P+ P+ Q P PSQ P + P
Sbjct: 513 QPGPAKPSPQQPGSTKPPSQQPGSAKP 539
Score = 61.6 bits (148), Expect = 3e-09
Identities = 115/493 (23%), Positives = 163/493 (33%), Gaps = 82/493 (16%)
Query: 18 SRPFRVTGPNSSSGIQARKNLFNNQGNASPPAGPSNVPK-----FGSPKPPVAVKPSSEE 72
S+P P SG+ K L G PP P K G KPP A + SE+
Sbjct: 324 SQPGPAKPPAQPSGLT--KPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPP-AQQTGSEK 380
Query: 73 KPDKEPKPPFL-KPTGAGQRFGTPASLT--TRDPEAKVGFLKPVGPKP-----INLPKED 124
++P P L +P G G+ TPA + P +VG KP+ +P P
Sbjct: 381 PSSEQPGPKALAQPPGVGK---TPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPT 437
Query: 125 SKPTFPWPPGNKPSLH------SVNQDHDLKPLGPKSGPT-PPTSENEQKQAFPKLTGVK 177
P PG P+ S Q KP GP PP + + P+ G
Sbjct: 438 KTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSA 497
Query: 178 GKFMSASQDLEPKPLFPKPAF-------GQKPPL----STENSHEDESPMKNVSSSKGSP 226
+P P P PA KPP S + S + SP K S++ S
Sbjct: 498 KPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAK--PSAQQST 555
Query: 227 APLGVRSKSGPLKPAREDSENKD---------------------HAGEISSLPFPGVVLK 265
P+ PL+P K H E ++
Sbjct: 556 KPVSQTGSGKPLQPPTVSPSAKQPPSQGLPKTICPLCNTTELLLHVPEKANFNTCTECQT 615
Query: 266 PAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELAS--GTPPARFPKAPSKLTVG 323
S G + + E KE + N + +LA +P + AP T
Sbjct: 616 TVCSLCGFNPNPHLTEVKEWLCL----NCQMKRALGGDLAPVPSSPQPKLKTAPVTTTSA 671
Query: 324 GPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTSKG 383
Q ++ K A PKQ + P P KP PP V H + S +
Sbjct: 672 VSKSSPQPQQTSPKKDAAPKQD-----LSKAPEPKKP--PPLVKQPTLHGSPSAKAKQPP 724
Query: 384 QTSYSTTSLPPPPPSHPASQPPLPAS--HPSQPPVPSLPPRNIKPPFDLKSPVNEDNQDG 441
+ + PP PS P+ Q P + P Q P+ +KP DL S + +
Sbjct: 725 EADSLSKPAPPKEPSVPSEQDKAPVADDKPKQ-------PKMVKPTTDLVSSSSATTKPD 777
Query: 442 VTHSDGAGNLDEE 454
+ S +E+
Sbjct: 778 IPSSKVQSQAEEK 790
Score = 55.1 bits (131), Expect = 3e-07
Identities = 100/451 (22%), Positives = 156/451 (34%), Gaps = 79/451 (17%)
Query: 55 PKFGSPKPPVAVKPSSEEKPDKEPKPPFLK-PTGAGQRFGTPASLTTRDPEAKVGFLKPV 113
P+ SPK A K + P+ + PP +K PT G+P++ + PEA KP
Sbjct: 679 PQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQPT----LHGSPSAKAKQPPEAD-SLSKPA 733
Query: 114 GPKPINLPKEDSKPTFPWPPGNKPSLHSVNQDHDLKPLGPKSGPTPPTSENEQKQAFPKL 173
PK ++P E K D KP PK P T A K
Sbjct: 734 PPKEPSVPSEQDKAPVA----------------DDKPKQPKM-VKPTTDLVSSSSATTKP 776
Query: 174 TGVKGKFMSASQDLEPKPLFPKPAFGQKPPLSTENSHEDESPMKNVSSSKGSPAPLGVRS 233
K S +++ PL A KP S + E SP SK P P
Sbjct: 777 DIPSSKVQSQAEEKTTPPLKTDSA---KPSQSFPPTGEKVSPF----DSKAIPRP----- 824
Query: 234 KSGPLKPAREDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKN 293
DS+ H G P++ G ++K+E +K A+
Sbjct: 825 --------ASDSKIISHPG-------------PSSESKGQKQVDPVQKKEEPKK---AQT 860
Query: 294 TFQSKINQEELASGTPPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTL 353
K + + + G+P P+ + TV P + +E+ + S L ++
Sbjct: 861 KMSPKPDAKPMPKGSPTPPGPRPTAGQTVPTPQQSPKPQEQSRRFSLN--------LGSI 912
Query: 354 GPPPPKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPPLPASHPSQ 413
P P +T + S+ ST P P P A PSQ
Sbjct: 913 TDAPKSQPTTPQETVTGKLFGFGASIFSQASNLISTAGQPGPHSQSGPGAPMKQAPAPSQ 972
Query: 414 PPVPSLPPRNI--KPPFDLKS-PVNEDNQDGVTHSDGAGNLDEEQDSEGETYEDIEASKE 470
PP PP++ PP KS PV ++ + E+ + + E ++ ++
Sbjct: 973 PPTSQGPPKSTGQAPPAPAKSIPVKKETKAPAA---------EKLEPKAEQAPTVKRTET 1023
Query: 471 REKKREKEEKKRLELEKKEQKEKEKKEQEIK 501
+K ++ K L E ++ K E+ K
Sbjct: 1024 EKKPPPIKDSKSLTAEPQKAVLPTKLEKSPK 1054
Score = 55.1 bits (131), Expect = 3e-07
Identities = 163/749 (21%), Positives = 257/749 (34%), Gaps = 132/749 (17%)
Query: 47 PPAGPSNVPKFGSPKPPVAVKPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRDPEAK 106
PP G V F S P +P+S+ K P P GQ+ P +A+
Sbjct: 807 PPTG-EKVSPFDSKAIP---RPASDSKIISHPGP---SSESKGQKQVDPVQKKEEPKKAQ 859
Query: 107 VGFLKPVGPKPINLPKEDSKPTFPWPPGNKPSLHSVNQDHDLKPLGPKSGPTPPTSENEQ 166
+ PKP P PT PPG +P+ ++ PTP S Q
Sbjct: 860 T----KMSPKPDAKPMPKGSPT---PPGPRPT-------------AGQTVPTPQQSPKPQ 899
Query: 167 KQAFPKLTGVKGKFMSA--SQDLEPKPLFPKPAFGQKPPLSTENSHEDESPMKNVSSSKG 224
+Q+ + + G A SQ P+ FG + ++ S N+ S+ G
Sbjct: 900 EQS-RRFSLNLGSITDAPKSQPTTPQETVTGKLFGFGASIFSQAS--------NLISTAG 950
Query: 225 SPAPLGVRSKSGPLKPAREDSENKDHAGE-----------ISSLPFPGVVLKPAASR--- 270
P P P+K A S+ G S+P PAA +
Sbjct: 951 QPGPHSQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKETKAPAAEKLEP 1010
Query: 271 ---GGPGLSKNGEEKKEDRKIDAAKNTFQSK---INQEELASGTPPARFPKAPSKLTVGG 324
P + + EKK D+ T + + + + S P + P ++L +G
Sbjct: 1011 KAEQAPTVKRTETEKKPPPIKDSKSLTAEPQKAVLPTKLEKSPKPESTCPLCKTELNIGS 1070
Query: 325 PWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTSKGQ 384
K+ + N+ T + + L P P LT+ + N ++
Sbjct: 1071 -------KDPPNFNTCTECKNQVCNLCGFNPTP---------HLTEIQEWLCLNCQTQRA 1114
Query: 385 TSYSTTSLP--PPPPSHPASQP-PLPASHPSQ-----PPVPSLPPRNIKPPFDLKSPVNE 436
S + PP PS P + P P+P SQ P V + + + + + + E
Sbjct: 1115 ISGQLGDIRKMPPAPSGPKASPMPVPTESSSQKTAVPPQVKLVKKQEQEVKTEAEKVILE 1174
Query: 437 DNQDGVTHSDGAGNLDEEQDSEGETYEDIEASKEREKKREKEEKKRLELEKKEQKEKEKK 496
++ ++ + +Q E E +AS +EKK EEKK + E+K + E++K
Sbjct: 1175 KVKETLSMEKIPPMVTTDQKQEESKLEKDKASALQEKKPLPEEKKLIPEEEKIRSEEKKP 1234
Query: 497 EQEIKKKFKLTGPIQVIHLAKACCDVKGGKNELSFKQGEQIEIIRITDNPEGKWLGRTAR 556
E KK P L +A + K QI E K GR A
Sbjct: 1235 LLEEKK----PTPEDKKLLPEAKTSAPEEQKHDLLKSQVQI--------AEEKLEGRVA- 1281
Query: 557 GSYGYIKTTAVEIDYDSLKLKKDSLGAPSRPIEDDQEVYDDVAEQDDISSHSQSGSGGIF 616
T E K++ G P ++D + + EQ
Sbjct: 1282 ------PKTVQEGKQPQTKMEGLPSGTPQSLPKEDDKTTKTIKEQ--------------- 1320
Query: 617 PPPP----DDDIYDGIEE-EDADDGFPAPPKQLDMGDEVYDDVDTSDFPVSSAEMSQGTN 671
P PP D + G E+ E DD Q + D S +SS S G
Sbjct: 1321 PQPPCTAKPDQVEPGKEKTEKEDDKSDTSSSQQPKSPQGLSDTGYSSDGISS---SLGEI 1377
Query: 672 VGKAKTEEKD-LKKLKK----QEKEEKDFRKKFKYDGEIRVLYSTKVTT---SITSKKWG 723
T+EKD LK LKK QE K + + + + +T + KK
Sbjct: 1378 PSLIPTDEKDILKGLKKDSFSQESSPSSPSDLAKLESTVLSILEAQASTLADEKSEKKTQ 1437
Query: 724 TRDLQVKPGESLEVIQTTDDTKVLCRNEE 752
++ + + E Q+ +T + +EE
Sbjct: 1438 PHEVSPEQPKDQEKTQSLSETLEITISEE 1466
Score = 52.8 bits (125), Expect = 1e-06
Identities = 106/461 (22%), Positives = 151/461 (32%), Gaps = 71/461 (15%)
Query: 10 PTEDVSVNSRPFRVTGPNSSSGIQARKNLFNNQ--GNASPPA---GPSNVP--KFGSPKP 62
P + P + GP +S Q +Q G A PP GP+ P + GS KP
Sbjct: 440 PVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKP 499
Query: 63 PVAVKPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRDPEAKVGFLKPVGPKPINLPK 122
P + +P S + P ++P P P G +T+ P + G KP +P
Sbjct: 500 P-SQQPGSTKPPPQQPGPAKPSPQQPG---------STKPPSQQPGSAKPSAQQPSPAKP 549
Query: 123 EDSKPTFP----------WPPGNKPSLHSVNQDHDLKPLGPKSGPTPPTSENEQKQAF-- 170
+ T P PP PS K + P T +K F
Sbjct: 550 SAQQSTKPVSQTGSGKPLQPPTVSPSAKQPPSQGLPKTICPLCNTTELLLHVPEKANFNT 609
Query: 171 -----------------PKLTGVKGKFMSASQ-------DLEPKPLFPKPAFGQKPPLST 206
P LT VK Q DL P P P+P + P++T
Sbjct: 610 CTECQTTVCSLCGFNPNPHLTEVKEWLCLNCQMKRALGGDLAPVPSSPQPKL-KTAPVTT 668
Query: 207 ENSHEDESPMKNVSSSKGSPAPLGVRSKS-GPLKP---AREDSENKDHAGEISSLPFPGV 262
++ SP +S K AP SK+ P KP ++ + + + + P
Sbjct: 669 TSAVSKSSPQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQPTLHGSPSAKAKQPPEADS 728
Query: 263 VLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELASGTPPARFPKAPSKLTV 322
+ KPA + S E+ K D K K + ++S + + P PS
Sbjct: 729 LSKPAPPKEP---SVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTK-PDIPSSKV- 783
Query: 323 GGPWGQSQEKEKGDKNSATPKQKP---LPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNS 379
QSQ +EK T KP PP P P +K +S
Sbjct: 784 -----QSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSKAIPRPASDSKIISHPGPSS 838
Query: 380 TSKGQTSYSTTSLPPPPPSHPASQPPLPASHPSQPPVPSLP 420
SKGQ P P P + P P+ P
Sbjct: 839 ESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKGSPTPP 879
Score = 48.9 bits (115), Expect = 2e-05
Identities = 153/733 (20%), Positives = 250/733 (34%), Gaps = 154/733 (21%)
Query: 8 GNPTEDVSVNSRPFRVTGPNSSSGIQARKNLFNNQGNASPPAGPSNVPKFGSPKPPVAVK 67
G P + S+P GP S+G +PPA ++P K P A K
Sbjct: 961 GAPMKQAPAPSQPPTSQGPPKSTG-------------QAPPAPAKSIPVKKETKAPAAEK 1007
Query: 68 --PSSEEKP-----DKEPKPPFLKPTGAGQRFGTPASLTTR-DPEAKVGFLKPVGPKPIN 119
P +E+ P + E KPP +K + + A L T+ + K P+ +N
Sbjct: 1008 LEPKAEQAPTVKRTETEKKPPPIKDSKSLTAEPQKAVLPTKLEKSPKPESTCPLCKTELN 1067
Query: 120 LPKEDSKPTFPWPP----------GNKPSLHSVN-----------------QDHDLK--- 149
+ +D P F G P+ H Q D++
Sbjct: 1068 IGSKDP-PNFNTCTECKNQVCNLCGFNPTPHLTEIQEWLCLNCQTQRAISGQLGDIRKMP 1126
Query: 150 --PLGPKSGPTP-PTSENEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKP----AFGQKP 202
P GPK+ P P PT + QK A P + K + K + K + + P
Sbjct: 1127 PAPSGPKASPMPVPTESSSQKTAVPPQVKLVKKQEQEVKTEAEKVILEKVKETLSMEKIP 1186
Query: 203 PLSTENSHEDESPM-KNVSSSKGSPAPLGVRSKSGPLKPAREDSENKDHAGEISSLPFPG 261
P+ T + ++ES + K+ +S+ PL K P + E K E P
Sbjct: 1187 PMVTTDQKQEESKLEKDKASALQEKKPLPEEKKLIPEEEKIRSEEKKPLLEEKKPTPEDK 1246
Query: 262 VVLKPAASRGGPGLSKN---------GEEKKEDRKID-AAKNTFQSKINQEELASGTPPA 311
+L P A P K+ EEK E R + Q + E L SGTP +
Sbjct: 1247 KLL-PEAKTSAPEEQKHDLLKSQVQIAEEKLEGRVAPKTVQEGKQPQTKMEGLPSGTPQS 1305
Query: 312 RFPKAPSKLTVG----------------GPWGQSQEKEKGDKNSATPKQKPLPPL----- 350
PK K T P + EKE DK+ + Q+P P
Sbjct: 1306 -LPKEDDKTTKTIKEQPQPPCTAKPDQVEPGKEKTEKED-DKSDTSSSQQPKSPQGLSDT 1363
Query: 351 ---------------------------------FTLGPPPPKPNRPPNVDLTKFHKTSSG 377
F+ P P+ ++ T +
Sbjct: 1364 GYSSDGISSSLGEIPSLIPTDEKDILKGLKKDSFSQESSPSSPSDLAKLESTVLSILEAQ 1423
Query: 378 NSTSKGQTSYSTTSLPPPPPSHPASQPPLPASHPSQPPVPSLPPRNIKPPFD-LKSPVNE 436
ST + S T P P Q + S+ ++ IK + K +
Sbjct: 1424 ASTLADEKSEKKTQPHEVSPEQPKDQEKTQSL--SETLEITISEEEIKESQEERKDTFKK 1481
Query: 437 DNQDGVTHSDGAGNLDEEQD---SEGETYEDIEASKEREKKREKEEKKRLELEKKEQKEK 493
D+Q + S E D + E Y+ +E S E E + K+R + E
Sbjct: 1482 DSQQDIPSSKDHKEKSEFVDDITTRREPYDSVEESSESENSPVPQRKRRTSVGSSSSDEY 1541
Query: 494 EKKEQEIKKKFKLTGPIQVIHLAKACCDVKGGKNELSFKQGEQIEIIRITDN---PEGKW 550
++++ + + + Q+I ++ A D G +++ F + + EI T++ E K
Sbjct: 1542 KQEDSQGSGEEEDFIRKQIIEMS-ADEDASGSEDD-EFIRNQLKEISSSTESQKKEETKG 1599
Query: 551 LGRTARGSYGYI-KTTAVEIDYDSLKLKKDSLGAPSRPIEDDQEVYDDVAEQDDISSHSQ 609
G+ G + + + ++ ID D+ G ++D E +D+ E + SQ
Sbjct: 1600 KGKITAGKHRRLTRKSSTSIDEDA--------GRRHSWHDEDDEAFDESPELKYRETKSQ 1651
Query: 610 -------SGSGGI 615
+G GG+
Sbjct: 1652 ESEELVVTGGGGL 1664
Score = 39.7 bits (91), Expect = 0.011
Identities = 119/563 (21%), Positives = 196/563 (34%), Gaps = 134/563 (23%)
Query: 47 PPAGPSNVPKFGS---------PKPPVAVKPSSEEK-PDKEPKPPFLKPTGAGQRFGTPA 96
P P ++PK P+PP KP E +K K T + Q+ +P
Sbjct: 1299 PSGTPQSLPKEDDKTTKTIKEQPQPPCTAKPDQVEPGKEKTEKEDDKSDTSSSQQPKSPQ 1358
Query: 97 SLTTRDPEAKVGFLKPVGPKPINLPKED------------SKPTFPWPPGNKPSLHSV-- 142
L+ + G +G P +P ++ S+ + P P + L S
Sbjct: 1359 GLSDTGYSSD-GISSSLGEIPSLIPTDEKDILKGLKKDSFSQESSPSSPSDLAKLESTVL 1417
Query: 143 ------------------NQDHDLKPLGPKSGPTPPT----------------SENEQKQ 168
Q H++ P PK + S+ E+K
Sbjct: 1418 SILEAQASTLADEKSEKKTQPHEVSPEQPKDQEKTQSLSETLEITISEEEIKESQEERKD 1477
Query: 169 AFPKLTGVKGKFMSASQDLEPKPLFPKPAFGQKPPL-STENSHEDES---PMKNVSSSKG 224
F K + + + +S+D + K F ++ P S E S E E+ P + +S G
Sbjct: 1478 TFKKDSQ---QDIPSSKDHKEKSEFVDDITTRREPYDSVEESSESENSPVPQRKRRTSVG 1534
Query: 225 SPAPLGVRSKSGPLKPARED---------SENKDHAGEISSLPFPGVVLKPAASRGGPGL 275
S + + + ED S ++D +G F LK +S
Sbjct: 1535 SSSSDEYKQEDSQGSGEEEDFIRKQIIEMSADEDASGSEDD-EFIRNQLKEISSSTE--- 1590
Query: 276 SKNGEEKKEDRKIDAAKN---TFQSKINQEELASG--------------TPPARFPKAPS 318
S+ EE K KI A K+ T +S + +E A +P ++ + S
Sbjct: 1591 SQKKEETKGKGKITAGKHRRLTRKSSTSIDEDAGRRHSWHDEDDEAFDESPELKYRETKS 1650
Query: 319 K----LTVGGPWGQSQEKEK------GDKNSATPKQKPLPPLFTLGPPPPKPNRPPNVDL 368
+ L V G G + K DK SA QK F + P +++
Sbjct: 1651 QESEELVVTGGGGLRRFKTIELNSTIADKYSAESSQKKTSLYF---------DEEPELEM 1701
Query: 369 TKFHKTSSGNSTSKGQTSYSTTSLPP-PPPSHPASQPPLPASHPSQPPVPSLPPRNIKP- 426
+ S +G +S +S P P+ +S S PS S R +
Sbjct: 1702 ESLTDSPEDRSRGEGSSSLHASSFTPGTSPTSVSSLDEDSDSSPSHKKGESKQQRKARHR 1761
Query: 427 PFDLKSPVNEDNQDGVTHSDGAGNLDEEQDSEGETYEDIEASKEREKKREKEEKKRLELE 486
P P ED+ + E E E+ E KE+EK+RE E+++R
Sbjct: 1762 PHGPLLPTIEDSSE-----------------EEELREEEELLKEQEKQREIEQQQRKSSS 1804
Query: 487 KKEQKEKEKKEQEIKKKFKLTGP 509
KK +K+K++ + +++ T P
Sbjct: 1805 KKSKKDKDELRAQRRRERPKTPP 1827
Score = 38.5 bits (88), Expect = 0.024
Identities = 53/260 (20%), Positives = 82/260 (31%), Gaps = 48/260 (18%)
Query: 194 PKPAFGQKPPLSTENSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKPAREDSENKDHAGE 253
PKP +ST+ ++ P+K G+ L V K + +
Sbjct: 2279 PKPEGPVADTVSTDLLISEKDPVKKAKKETGNGIILEVLEAYRDKKELEAERTKSSLSET 2338
Query: 254 ISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELASGTPP-AR 312
+ P V+ P + +GE TF + +L SG+P +
Sbjct: 2339 VFDHPPSSVIALPMKEQLSTTYFTSGE-------------TFGQEKPASQLPSGSPSVSS 2385
Query: 313 FPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKPNRPPNVD----- 367
P P P+ +S + + P P PP PPPP P PP
Sbjct: 2386 LPAKPR------PFFRSSSLDISAQPPPPPPPPPPPP--PPPPPPPPPPLPPPTSPKPTI 2437
Query: 368 ---------------------LTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPPL 406
+T T+ S T TT+ PP PP + L
Sbjct: 2438 LPKKKLTVASPVTTATPLFDAVTTLETTAVLRSNGLPVTRICTTAPPPVPPKPSSIPSGL 2497
Query: 407 PASHPSQPPVPSLPPRNIKP 426
+H +P P + P+ + P
Sbjct: 2498 VFTHRPEPSKPPIAPKPVIP 2517
Score = 38.1 bits (87), Expect = 0.032
Identities = 47/178 (26%), Positives = 63/178 (35%), Gaps = 36/178 (20%)
Query: 264 LKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELASGTPPARFPKAPSK---- 319
+K A G G+ E D+K A+ T K + E PP+ P K
Sbjct: 2301 VKKAKKETGNGIILEVLEAYRDKKELEAERT---KSSLSETVFDHPPSSVIALPMKEQLS 2357
Query: 320 ---LTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSS 376
T G +GQ EK S +P LP P+P F ++SS
Sbjct: 2358 TTYFTSGETFGQ--EKPASQLPSGSPSVSSLPA-------KPRP----------FFRSSS 2398
Query: 377 GNSTSKGQTSYSTTSLPPPPPSHPASQPPLPASHPSQPPVPSLPPRNIKPPFDLKSPV 434
+ +++ PPPPP P PP P P PP P K + SPV
Sbjct: 2399 LDISAQPPP-------PPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASPV 2449
Score = 32.0 bits (71), Expect = 2.3
Identities = 39/179 (21%), Positives = 61/179 (34%), Gaps = 25/179 (13%)
Query: 265 KPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELASGTP---PARFPKAP-SKL 320
KP + GPG + ++D + + KI + +G P P + P+ +KL
Sbjct: 217 KPIPKQQGPGR----DPLQQDGTPKSISSQQPEKIKSQPPGTGKPIQGPTQTPQTDHAKL 272
Query: 321 TVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNST 380
+ + D + KQ + ++ P P P++PP T +
Sbjct: 273 PL-----------QRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPGKPPAQQPGH 321
Query: 381 SKGQTSYSTTSLPPPPPSHPASQPPLPASHPSQPPVPSLPPRNIKPPFDLKSPVNEDNQ 439
K Q P PP+ P+ A P P PP KPP P Q
Sbjct: 322 EKSQPG------PAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQ 374
Score = 32.0 bits (71), Expect = 2.3
Identities = 53/227 (23%), Positives = 76/227 (33%), Gaps = 47/227 (20%)
Query: 48 PAGPSNVP-------KFGSPKPPVAVKPSSEEKPDKEPKPPFL--KPTGAGQRFGTPASL 98
P PS++P + KPP+A KP + P KP + KPTG +L
Sbjct: 2487 PPKPSSIPSGLVFTHRPEPSKPPIAPKPVIPQLPTTTQKPTDIHPKPTGLSLTSSMTLNL 2546
Query: 99 TTRDPEAKVGFLKPVGPKP-----------------INLPKEDSKPT--------FPWPP 133
T P+ P I LP E PT WP
Sbjct: 2547 VTSADYKLPSPTSPLSPHSNKSSPRFSKSLTETYVVITLPSEPGTPTDSSASQAITSWPL 2606
Query: 134 GNKPSLHSVNQDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKFMSASQDLEPKPLF 193
G+ PS DL + P PP + E + + + G A Q P+
Sbjct: 2607 GS-PS-------KDLVSVEPVFSVVPPVTAVEIPISSEQTFYISG----ALQTFSATPVT 2654
Query: 194 PKPAFGQKPPLSTENSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKP 240
+F Q P S E VS+++ + +G+ S S + P
Sbjct: 2655 APSSF-QAAPTSVTQFLTTEVSKTEVSATRSTAPSVGLSSISITIPP 2700
Score = 31.2 bits (69), Expect = 3.9
Identities = 44/163 (26%), Positives = 58/163 (35%), Gaps = 14/163 (8%)
Query: 24 TGPNSSSGIQARKNLFNNQGNASPPAGPSNVPKFGSPKPPVAVKPSSEEKPDKEPKPPFL 83
+G S S + A+ F + A P P P PP P P P P
Sbjct: 2378 SGSPSVSSLPAKPRPFFRSSSLDISAQPPPPP----PPPPPPPPPPPPPPPPPLPPPTSP 2433
Query: 84 KPTGAGQRFGTPAS-LTTRDP--EAKVGFLKPVGPKPINLPKEDSKPTFPWPPGNKPSL- 139
KPT ++ T AS +TT P +A + LP T P P KPS
Sbjct: 2434 KPTILPKKKLTVASPVTTATPLFDAVTTLETTAVLRSNGLPVTRICTTAPPPVPPKPSSI 2493
Query: 140 -HSVNQDHDLKPLGPKSGPTP-----PTSENEQKQAFPKLTGV 176
+ H +P P P P PT+ + PK TG+
Sbjct: 2494 PSGLVFTHRPEPSKPPIAPKPVIPQLPTTTQKPTDIHPKPTGL 2536
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 62.0 bits (149), Expect = 2e-09
Identities = 95/387 (24%), Positives = 139/387 (35%), Gaps = 76/387 (19%)
Query: 61 KPPVAVKPSSEEKPDKEPKPPFLKPTGAG----QRFGTPASLTTRDPEAKVGFLKPVGPK 116
KP +KP +++P K P K G G Q+ GTP S++++ PE K+ P K
Sbjct: 202 KPEGIIKPPLQQQPPK----PIPKQQGPGRDPLQQDGTPKSISSQQPE-KIKSQPPGTGK 256
Query: 117 PINLPKEDSKPTFPWPPGNKPSLHSVNQDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGV 176
PI P + + DH PL + P T + + V
Sbjct: 257 PIQGPTQTPQT-----------------DHAKLPL-QRDASRPQTKQADI---------V 289
Query: 177 KGKFMSASQDLEPKPLFPKPAFGQKPPLSTENSHEDESPMKNVSSSKGSPAPLG------ 230
+G+ + S KP +P G+ P + P K + G PL
Sbjct: 290 RGESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTV 349
Query: 231 ---------VRSKSGPLKPAREDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKN--- 278
+ + PL PA+ ++ S P P + +P PG+ K
Sbjct: 350 KPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQP------PGVGKTPAQ 403
Query: 279 --GEEKKEDRKIDAAKNTFQSKINQEELASGTPPARFPKAPSKLTVGGPW-GQSQEKEKG 335
G K +++ K Q Q L S PA+ P P+K V P G+ ++ G
Sbjct: 404 QPGPAKPPTQQVGTPKPLAQ----QPGLQS---PAKAP-GPTKTPVQQPGPGKIPAQQAG 455
Query: 336 D-KNSATPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPP 394
K SA PP GP P P +P K G++ Q ST P
Sbjct: 456 PGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPA---KPPPQQPGSAKPPSQQPGSTKPPPQ 512
Query: 395 PP-PSHPASQPPLPASHPSQPPVPSLP 420
P P+ P+ Q P PSQ P + P
Sbjct: 513 QPGPAKPSPQQPGSTKPPSQQPGSAKP 539
Score = 61.6 bits (148), Expect = 3e-09
Identities = 115/493 (23%), Positives = 163/493 (33%), Gaps = 82/493 (16%)
Query: 18 SRPFRVTGPNSSSGIQARKNLFNNQGNASPPAGPSNVPK-----FGSPKPPVAVKPSSEE 72
S+P P SG+ K L G PP P K G KPP A + SE+
Sbjct: 324 SQPGPAKPPAQPSGLT--KPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPP-AQQTGSEK 380
Query: 73 KPDKEPKPPFL-KPTGAGQRFGTPASLT--TRDPEAKVGFLKPVGPKP-----INLPKED 124
++P P L +P G G+ TPA + P +VG KP+ +P P
Sbjct: 381 PSSEQPGPKALAQPPGVGK---TPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPT 437
Query: 125 SKPTFPWPPGNKPSLH------SVNQDHDLKPLGPKSGPT-PPTSENEQKQAFPKLTGVK 177
P PG P+ S Q KP GP PP + + P+ G
Sbjct: 438 KTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSA 497
Query: 178 GKFMSASQDLEPKPLFPKPAF-------GQKPPL----STENSHEDESPMKNVSSSKGSP 226
+P P P PA KPP S + S + SP K S++ S
Sbjct: 498 KPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAK--PSAQQST 555
Query: 227 APLGVRSKSGPLKPAREDSENKD---------------------HAGEISSLPFPGVVLK 265
P+ PL+P K H E ++
Sbjct: 556 KPVSQTGSGKPLQPPTVSPSAKQPPSQGLPKTICPLCNTTELLLHVPEKANFNTCTECQT 615
Query: 266 PAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELAS--GTPPARFPKAPSKLTVG 323
S G + + E KE + N + +LA +P + AP T
Sbjct: 616 TVCSLCGFNPNPHLTEVKEWLCL----NCQMKRALGGDLAPVPSSPQPKLKTAPVTTTSA 671
Query: 324 GPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTSKG 383
Q ++ K A PKQ + P P KP PP V H + S +
Sbjct: 672 VSKSSPQPQQTSPKKDAAPKQD-----LSKAPEPKKP--PPLVKQPTLHGSPSAKAKQPP 724
Query: 384 QTSYSTTSLPPPPPSHPASQPPLPAS--HPSQPPVPSLPPRNIKPPFDLKSPVNEDNQDG 441
+ + PP PS P+ Q P + P Q P+ +KP DL S + +
Sbjct: 725 EADSLSKPAPPKEPSVPSEQDKAPVADDKPKQ-------PKMVKPTTDLVSSSSATTKPD 777
Query: 442 VTHSDGAGNLDEE 454
+ S +E+
Sbjct: 778 IPSSKVQSQAEEK 790
Score = 55.1 bits (131), Expect = 3e-07
Identities = 100/451 (22%), Positives = 156/451 (34%), Gaps = 79/451 (17%)
Query: 55 PKFGSPKPPVAVKPSSEEKPDKEPKPPFLK-PTGAGQRFGTPASLTTRDPEAKVGFLKPV 113
P+ SPK A K + P+ + PP +K PT G+P++ + PEA KP
Sbjct: 679 PQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQPT----LHGSPSAKAKQPPEAD-SLSKPA 733
Query: 114 GPKPINLPKEDSKPTFPWPPGNKPSLHSVNQDHDLKPLGPKSGPTPPTSENEQKQAFPKL 173
PK ++P E K D KP PK P T A K
Sbjct: 734 PPKEPSVPSEQDKAPVA----------------DDKPKQPKM-VKPTTDLVSSSSATTKP 776
Query: 174 TGVKGKFMSASQDLEPKPLFPKPAFGQKPPLSTENSHEDESPMKNVSSSKGSPAPLGVRS 233
K S +++ PL A KP S + E SP SK P P
Sbjct: 777 DIPSSKVQSQAEEKTTPPLKTDSA---KPSQSFPPTGEKVSPF----DSKAIPRP----- 824
Query: 234 KSGPLKPAREDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKN 293
DS+ H G P++ G ++K+E +K A+
Sbjct: 825 --------ASDSKIISHPG-------------PSSESKGQKQVDPVQKKEEPKK---AQT 860
Query: 294 TFQSKINQEELASGTPPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTL 353
K + + + G+P P+ + TV P + +E+ + S L ++
Sbjct: 861 KMSPKPDAKPMPKGSPTPPGPRPTAGQTVPTPQQSPKPQEQSRRFSLN--------LGSI 912
Query: 354 GPPPPKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPPLPASHPSQ 413
P P +T + S+ ST P P P A PSQ
Sbjct: 913 TDAPKSQPTTPQETVTGKLFGFGASIFSQASNLISTAGQPGPHSQSGPGAPMKQAPAPSQ 972
Query: 414 PPVPSLPPRNI--KPPFDLKS-PVNEDNQDGVTHSDGAGNLDEEQDSEGETYEDIEASKE 470
PP PP++ PP KS PV ++ + E+ + + E ++ ++
Sbjct: 973 PPTSQGPPKSTGQAPPAPAKSIPVKKETKAPAA---------EKLEPKAEQAPTVKRTET 1023
Query: 471 REKKREKEEKKRLELEKKEQKEKEKKEQEIK 501
+K ++ K L E ++ K E+ K
Sbjct: 1024 EKKPPPIKDSKSLTAEPQKAVLPTKLEKSPK 1054
Score = 55.1 bits (131), Expect = 3e-07
Identities = 163/749 (21%), Positives = 257/749 (34%), Gaps = 132/749 (17%)
Query: 47 PPAGPSNVPKFGSPKPPVAVKPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRDPEAK 106
PP G V F S P +P+S+ K P P GQ+ P +A+
Sbjct: 807 PPTG-EKVSPFDSKAIP---RPASDSKIISHPGP---SSESKGQKQVDPVQKKEEPKKAQ 859
Query: 107 VGFLKPVGPKPINLPKEDSKPTFPWPPGNKPSLHSVNQDHDLKPLGPKSGPTPPTSENEQ 166
+ PKP P PT PPG +P+ ++ PTP S Q
Sbjct: 860 T----KMSPKPDAKPMPKGSPT---PPGPRPT-------------AGQTVPTPQQSPKPQ 899
Query: 167 KQAFPKLTGVKGKFMSA--SQDLEPKPLFPKPAFGQKPPLSTENSHEDESPMKNVSSSKG 224
+Q+ + + G A SQ P+ FG + ++ S N+ S+ G
Sbjct: 900 EQS-RRFSLNLGSITDAPKSQPTTPQETVTGKLFGFGASIFSQAS--------NLISTAG 950
Query: 225 SPAPLGVRSKSGPLKPAREDSENKDHAGE-----------ISSLPFPGVVLKPAASR--- 270
P P P+K A S+ G S+P PAA +
Sbjct: 951 QPGPHSQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKETKAPAAEKLEP 1010
Query: 271 ---GGPGLSKNGEEKKEDRKIDAAKNTFQSK---INQEELASGTPPARFPKAPSKLTVGG 324
P + + EKK D+ T + + + + S P + P ++L +G
Sbjct: 1011 KAEQAPTVKRTETEKKPPPIKDSKSLTAEPQKAVLPTKLEKSPKPESTCPLCKTELNIGS 1070
Query: 325 PWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTSKGQ 384
K+ + N+ T + + L P P LT+ + N ++
Sbjct: 1071 -------KDPPNFNTCTECKNQVCNLCGFNPTP---------HLTEIQEWLCLNCQTQRA 1114
Query: 385 TSYSTTSLP--PPPPSHPASQP-PLPASHPSQ-----PPVPSLPPRNIKPPFDLKSPVNE 436
S + PP PS P + P P+P SQ P V + + + + + + E
Sbjct: 1115 ISGQLGDIRKMPPAPSGPKASPMPVPTESSSQKTAVPPQVKLVKKQEQEVKTEAEKVILE 1174
Query: 437 DNQDGVTHSDGAGNLDEEQDSEGETYEDIEASKEREKKREKEEKKRLELEKKEQKEKEKK 496
++ ++ + +Q E E +AS +EKK EEKK + E+K + E++K
Sbjct: 1175 KVKETLSMEKIPPMVTTDQKQEESKLEKDKASALQEKKPLPEEKKLIPEEEKIRSEEKKP 1234
Query: 497 EQEIKKKFKLTGPIQVIHLAKACCDVKGGKNELSFKQGEQIEIIRITDNPEGKWLGRTAR 556
E KK P L +A + K QI E K GR A
Sbjct: 1235 LLEEKK----PTPEDKKLLPEAKTSAPEEQKHDLLKSQVQI--------AEEKLEGRVA- 1281
Query: 557 GSYGYIKTTAVEIDYDSLKLKKDSLGAPSRPIEDDQEVYDDVAEQDDISSHSQSGSGGIF 616
T E K++ G P ++D + + EQ
Sbjct: 1282 ------PKTVQEGKQPQTKMEGLPSGTPQSLPKEDDKTTKTIKEQ--------------- 1320
Query: 617 PPPP----DDDIYDGIEE-EDADDGFPAPPKQLDMGDEVYDDVDTSDFPVSSAEMSQGTN 671
P PP D + G E+ E DD Q + D S +SS S G
Sbjct: 1321 PQPPCTAKPDQVEPGKEKTEKEDDKSDTSSSQQPKSPQGLSDTGYSSDGISS---SLGEI 1377
Query: 672 VGKAKTEEKD-LKKLKK----QEKEEKDFRKKFKYDGEIRVLYSTKVTT---SITSKKWG 723
T+EKD LK LKK QE K + + + + +T + KK
Sbjct: 1378 PSLIPTDEKDILKGLKKDSFSQESSPSSPSDLAKLESTVLSILEAQASTLADEKSEKKTQ 1437
Query: 724 TRDLQVKPGESLEVIQTTDDTKVLCRNEE 752
++ + + E Q+ +T + +EE
Sbjct: 1438 PHEVSPEQPKDQEKTQSLSETLEITISEE 1466
Score = 52.8 bits (125), Expect = 1e-06
Identities = 106/461 (22%), Positives = 151/461 (32%), Gaps = 71/461 (15%)
Query: 10 PTEDVSVNSRPFRVTGPNSSSGIQARKNLFNNQ--GNASPPA---GPSNVP--KFGSPKP 62
P + P + GP +S Q +Q G A PP GP+ P + GS KP
Sbjct: 440 PVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKP 499
Query: 63 PVAVKPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRDPEAKVGFLKPVGPKPINLPK 122
P + +P S + P ++P P P G +T+ P + G KP +P
Sbjct: 500 P-SQQPGSTKPPPQQPGPAKPSPQQPG---------STKPPSQQPGSAKPSAQQPSPAKP 549
Query: 123 EDSKPTFP----------WPPGNKPSLHSVNQDHDLKPLGPKSGPTPPTSENEQKQAF-- 170
+ T P PP PS K + P T +K F
Sbjct: 550 SAQQSTKPVSQTGSGKPLQPPTVSPSAKQPPSQGLPKTICPLCNTTELLLHVPEKANFNT 609
Query: 171 -----------------PKLTGVKGKFMSASQ-------DLEPKPLFPKPAFGQKPPLST 206
P LT VK Q DL P P P+P + P++T
Sbjct: 610 CTECQTTVCSLCGFNPNPHLTEVKEWLCLNCQMKRALGGDLAPVPSSPQPKL-KTAPVTT 668
Query: 207 ENSHEDESPMKNVSSSKGSPAPLGVRSKS-GPLKP---AREDSENKDHAGEISSLPFPGV 262
++ SP +S K AP SK+ P KP ++ + + + + P
Sbjct: 669 TSAVSKSSPQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQPTLHGSPSAKAKQPPEADS 728
Query: 263 VLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELASGTPPARFPKAPSKLTV 322
+ KPA + S E+ K D K K + ++S + + P PS
Sbjct: 729 LSKPAPPKEP---SVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTK-PDIPSSKV- 783
Query: 323 GGPWGQSQEKEKGDKNSATPKQKP---LPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNS 379
QSQ +EK T KP PP P P +K +S
Sbjct: 784 -----QSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSKAIPRPASDSKIISHPGPSS 838
Query: 380 TSKGQTSYSTTSLPPPPPSHPASQPPLPASHPSQPPVPSLP 420
SKGQ P P P + P P+ P
Sbjct: 839 ESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKGSPTPP 879
Score = 48.9 bits (115), Expect = 2e-05
Identities = 153/733 (20%), Positives = 250/733 (34%), Gaps = 154/733 (21%)
Query: 8 GNPTEDVSVNSRPFRVTGPNSSSGIQARKNLFNNQGNASPPAGPSNVPKFGSPKPPVAVK 67
G P + S+P GP S+G +PPA ++P K P A K
Sbjct: 961 GAPMKQAPAPSQPPTSQGPPKSTG-------------QAPPAPAKSIPVKKETKAPAAEK 1007
Query: 68 --PSSEEKP-----DKEPKPPFLKPTGAGQRFGTPASLTTR-DPEAKVGFLKPVGPKPIN 119
P +E+ P + E KPP +K + + A L T+ + K P+ +N
Sbjct: 1008 LEPKAEQAPTVKRTETEKKPPPIKDSKSLTAEPQKAVLPTKLEKSPKPESTCPLCKTELN 1067
Query: 120 LPKEDSKPTFPWPP----------GNKPSLHSVN-----------------QDHDLK--- 149
+ +D P F G P+ H Q D++
Sbjct: 1068 IGSKDP-PNFNTCTECKNQVCNLCGFNPTPHLTEIQEWLCLNCQTQRAISGQLGDIRKMP 1126
Query: 150 --PLGPKSGPTP-PTSENEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKP----AFGQKP 202
P GPK+ P P PT + QK A P + K + K + K + + P
Sbjct: 1127 PAPSGPKASPMPVPTESSSQKTAVPPQVKLVKKQEQEVKTEAEKVILEKVKETLSMEKIP 1186
Query: 203 PLSTENSHEDESPM-KNVSSSKGSPAPLGVRSKSGPLKPAREDSENKDHAGEISSLPFPG 261
P+ T + ++ES + K+ +S+ PL K P + E K E P
Sbjct: 1187 PMVTTDQKQEESKLEKDKASALQEKKPLPEEKKLIPEEEKIRSEEKKPLLEEKKPTPEDK 1246
Query: 262 VVLKPAASRGGPGLSKN---------GEEKKEDRKID-AAKNTFQSKINQEELASGTPPA 311
+L P A P K+ EEK E R + Q + E L SGTP +
Sbjct: 1247 KLL-PEAKTSAPEEQKHDLLKSQVQIAEEKLEGRVAPKTVQEGKQPQTKMEGLPSGTPQS 1305
Query: 312 RFPKAPSKLTVG----------------GPWGQSQEKEKGDKNSATPKQKPLPPL----- 350
PK K T P + EKE DK+ + Q+P P
Sbjct: 1306 -LPKEDDKTTKTIKEQPQPPCTAKPDQVEPGKEKTEKED-DKSDTSSSQQPKSPQGLSDT 1363
Query: 351 ---------------------------------FTLGPPPPKPNRPPNVDLTKFHKTSSG 377
F+ P P+ ++ T +
Sbjct: 1364 GYSSDGISSSLGEIPSLIPTDEKDILKGLKKDSFSQESSPSSPSDLAKLESTVLSILEAQ 1423
Query: 378 NSTSKGQTSYSTTSLPPPPPSHPASQPPLPASHPSQPPVPSLPPRNIKPPFD-LKSPVNE 436
ST + S T P P Q + S+ ++ IK + K +
Sbjct: 1424 ASTLADEKSEKKTQPHEVSPEQPKDQEKTQSL--SETLEITISEEEIKESQEERKDTFKK 1481
Query: 437 DNQDGVTHSDGAGNLDEEQD---SEGETYEDIEASKEREKKREKEEKKRLELEKKEQKEK 493
D+Q + S E D + E Y+ +E S E E + K+R + E
Sbjct: 1482 DSQQDIPSSKDHKEKSEFVDDITTRREPYDSVEESSESENSPVPQRKRRTSVGSSSSDEY 1541
Query: 494 EKKEQEIKKKFKLTGPIQVIHLAKACCDVKGGKNELSFKQGEQIEIIRITDN---PEGKW 550
++++ + + + Q+I ++ A D G +++ F + + EI T++ E K
Sbjct: 1542 KQEDSQGSGEEEDFIRKQIIEMS-ADEDASGSEDD-EFIRNQLKEISSSTESQKKEETKG 1599
Query: 551 LGRTARGSYGYI-KTTAVEIDYDSLKLKKDSLGAPSRPIEDDQEVYDDVAEQDDISSHSQ 609
G+ G + + + ++ ID D+ G ++D E +D+ E + SQ
Sbjct: 1600 KGKITAGKHRRLTRKSSTSIDEDA--------GRRHSWHDEDDEAFDESPELKYRETKSQ 1651
Query: 610 -------SGSGGI 615
+G GG+
Sbjct: 1652 ESEELVVTGGGGL 1664
Score = 39.7 bits (91), Expect = 0.011
Identities = 119/563 (21%), Positives = 196/563 (34%), Gaps = 134/563 (23%)
Query: 47 PPAGPSNVPKFGS---------PKPPVAVKPSSEEK-PDKEPKPPFLKPTGAGQRFGTPA 96
P P ++PK P+PP KP E +K K T + Q+ +P
Sbjct: 1299 PSGTPQSLPKEDDKTTKTIKEQPQPPCTAKPDQVEPGKEKTEKEDDKSDTSSSQQPKSPQ 1358
Query: 97 SLTTRDPEAKVGFLKPVGPKPINLPKED------------SKPTFPWPPGNKPSLHSV-- 142
L+ + G +G P +P ++ S+ + P P + L S
Sbjct: 1359 GLSDTGYSSD-GISSSLGEIPSLIPTDEKDILKGLKKDSFSQESSPSSPSDLAKLESTVL 1417
Query: 143 ------------------NQDHDLKPLGPKSGPTPPT----------------SENEQKQ 168
Q H++ P PK + S+ E+K
Sbjct: 1418 SILEAQASTLADEKSEKKTQPHEVSPEQPKDQEKTQSLSETLEITISEEEIKESQEERKD 1477
Query: 169 AFPKLTGVKGKFMSASQDLEPKPLFPKPAFGQKPPL-STENSHEDES---PMKNVSSSKG 224
F K + + + +S+D + K F ++ P S E S E E+ P + +S G
Sbjct: 1478 TFKKDSQ---QDIPSSKDHKEKSEFVDDITTRREPYDSVEESSESENSPVPQRKRRTSVG 1534
Query: 225 SPAPLGVRSKSGPLKPARED---------SENKDHAGEISSLPFPGVVLKPAASRGGPGL 275
S + + + ED S ++D +G F LK +S
Sbjct: 1535 SSSSDEYKQEDSQGSGEEEDFIRKQIIEMSADEDASGSEDD-EFIRNQLKEISSSTE--- 1590
Query: 276 SKNGEEKKEDRKIDAAKN---TFQSKINQEELASG--------------TPPARFPKAPS 318
S+ EE K KI A K+ T +S + +E A +P ++ + S
Sbjct: 1591 SQKKEETKGKGKITAGKHRRLTRKSSTSIDEDAGRRHSWHDEDDEAFDESPELKYRETKS 1650
Query: 319 K----LTVGGPWGQSQEKEK------GDKNSATPKQKPLPPLFTLGPPPPKPNRPPNVDL 368
+ L V G G + K DK SA QK F + P +++
Sbjct: 1651 QESEELVVTGGGGLRRFKTIELNSTIADKYSAESSQKKTSLYF---------DEEPELEM 1701
Query: 369 TKFHKTSSGNSTSKGQTSYSTTSLPP-PPPSHPASQPPLPASHPSQPPVPSLPPRNIKP- 426
+ S +G +S +S P P+ +S S PS S R +
Sbjct: 1702 ESLTDSPEDRSRGEGSSSLHASSFTPGTSPTSVSSLDEDSDSSPSHKKGESKQQRKARHR 1761
Query: 427 PFDLKSPVNEDNQDGVTHSDGAGNLDEEQDSEGETYEDIEASKEREKKREKEEKKRLELE 486
P P ED+ + E E E+ E KE+EK+RE E+++R
Sbjct: 1762 PHGPLLPTIEDSSE-----------------EEELREEEELLKEQEKQREIEQQQRKSSS 1804
Query: 487 KKEQKEKEKKEQEIKKKFKLTGP 509
KK +K+K++ + +++ T P
Sbjct: 1805 KKSKKDKDELRAQRRRERPKTPP 1827
Score = 38.5 bits (88), Expect = 0.024
Identities = 53/260 (20%), Positives = 82/260 (31%), Gaps = 48/260 (18%)
Query: 194 PKPAFGQKPPLSTENSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKPAREDSENKDHAGE 253
PKP +ST+ ++ P+K G+ L V K + +
Sbjct: 2279 PKPEGPVADTVSTDLLISEKDPVKKAKKETGNGIILEVLEAYRDKKELEAERTKSSLSET 2338
Query: 254 ISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELASGTPP-AR 312
+ P V+ P + +GE TF + +L SG+P +
Sbjct: 2339 VFDHPPSSVIALPMKEQLSTTYFTSGE-------------TFGQEKPASQLPSGSPSVSS 2385
Query: 313 FPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKPNRPPNVD----- 367
P P P+ +S + + P P PP PPPP P PP
Sbjct: 2386 LPAKPR------PFFRSSSLDISAQPPPPPPPPPPPP--PPPPPPPPPPLPPPTSPKPTI 2437
Query: 368 ---------------------LTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPPL 406
+T T+ S T TT+ PP PP + L
Sbjct: 2438 LPKKKLTVASPVTTATPLFDAVTTLETTAVLRSNGLPVTRICTTAPPPVPPKPSSIPSGL 2497
Query: 407 PASHPSQPPVPSLPPRNIKP 426
+H +P P + P+ + P
Sbjct: 2498 VFTHRPEPSKPPIAPKPVIP 2517
Score = 38.1 bits (87), Expect = 0.032
Identities = 47/178 (26%), Positives = 63/178 (35%), Gaps = 36/178 (20%)
Query: 264 LKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELASGTPPARFPKAPSK---- 319
+K A G G+ E D+K A+ T K + E PP+ P K
Sbjct: 2301 VKKAKKETGNGIILEVLEAYRDKKELEAERT---KSSLSETVFDHPPSSVIALPMKEQLS 2357
Query: 320 ---LTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSS 376
T G +GQ EK S +P LP P+P F ++SS
Sbjct: 2358 TTYFTSGETFGQ--EKPASQLPSGSPSVSSLPA-------KPRP----------FFRSSS 2398
Query: 377 GNSTSKGQTSYSTTSLPPPPPSHPASQPPLPASHPSQPPVPSLPPRNIKPPFDLKSPV 434
+ +++ PPPPP P PP P P PP P K + SPV
Sbjct: 2399 LDISAQPPP-------PPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASPV 2449
Score = 32.0 bits (71), Expect = 2.3
Identities = 39/179 (21%), Positives = 61/179 (34%), Gaps = 25/179 (13%)
Query: 265 KPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELASGTP---PARFPKAP-SKL 320
KP + GPG + ++D + + KI + +G P P + P+ +KL
Sbjct: 217 KPIPKQQGPGR----DPLQQDGTPKSISSQQPEKIKSQPPGTGKPIQGPTQTPQTDHAKL 272
Query: 321 TVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNST 380
+ + D + KQ + ++ P P P++PP T +
Sbjct: 273 PL-----------QRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPGKPPAQQPGH 321
Query: 381 SKGQTSYSTTSLPPPPPSHPASQPPLPASHPSQPPVPSLPPRNIKPPFDLKSPVNEDNQ 439
K Q P PP+ P+ A P P PP KPP P Q
Sbjct: 322 EKSQPG------PAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQ 374
Score = 32.0 bits (71), Expect = 2.3
Identities = 53/227 (23%), Positives = 76/227 (33%), Gaps = 47/227 (20%)
Query: 48 PAGPSNVP-------KFGSPKPPVAVKPSSEEKPDKEPKPPFL--KPTGAGQRFGTPASL 98
P PS++P + KPP+A KP + P KP + KPTG +L
Sbjct: 2487 PPKPSSIPSGLVFTHRPEPSKPPIAPKPVIPQLPTTTQKPTDIHPKPTGLSLTSSMTLNL 2546
Query: 99 TTRDPEAKVGFLKPVGPKP-----------------INLPKEDSKPT--------FPWPP 133
T P+ P I LP E PT WP
Sbjct: 2547 VTSADYKLPSPTSPLSPHSNKSSPRFSKSLTETYVVITLPSEPGTPTDSSASQAITSWPL 2606
Query: 134 GNKPSLHSVNQDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKFMSASQDLEPKPLF 193
G+ PS DL + P PP + E + + + G A Q P+
Sbjct: 2607 GS-PS-------KDLVSVEPVFSVVPPVTAVEIPISSEQTFYISG----ALQTFSATPVT 2654
Query: 194 PKPAFGQKPPLSTENSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKP 240
+F Q P S E VS+++ + +G+ S S + P
Sbjct: 2655 APSSF-QAAPTSVTQFLTTEVSKTEVSATRSTAPSVGLSSISITIPP 2700
Score = 31.2 bits (69), Expect = 3.9
Identities = 44/163 (26%), Positives = 58/163 (35%), Gaps = 14/163 (8%)
Query: 24 TGPNSSSGIQARKNLFNNQGNASPPAGPSNVPKFGSPKPPVAVKPSSEEKPDKEPKPPFL 83
+G S S + A+ F + A P P P PP P P P P
Sbjct: 2378 SGSPSVSSLPAKPRPFFRSSSLDISAQPPPPP----PPPPPPPPPPPPPPPPPLPPPTSP 2433
Query: 84 KPTGAGQRFGTPAS-LTTRDP--EAKVGFLKPVGPKPINLPKEDSKPTFPWPPGNKPSL- 139
KPT ++ T AS +TT P +A + LP T P P KPS
Sbjct: 2434 KPTILPKKKLTVASPVTTATPLFDAVTTLETTAVLRSNGLPVTRICTTAPPPVPPKPSSI 2493
Query: 140 -HSVNQDHDLKPLGPKSGPTP-----PTSENEQKQAFPKLTGV 176
+ H +P P P P PT+ + PK TG+
Sbjct: 2494 PSGLVFTHRPEPSKPPIAPKPVIPQLPTTTQKPTDIHPKPTGL 2536
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 60.5 bits (145), Expect = 6e-09
Identities = 116/478 (24%), Positives = 155/478 (32%), Gaps = 67/478 (14%)
Query: 26 PNSSSGIQARKNLFNNQGNASPPAGPSNVPKFGSPKPPVAVKPSSEEKPDKEPKPPFLKP 85
PN R+ + P P P+ + P P+S P K KP
Sbjct: 1145 PNPGPDGPRRRGRKPTKAKRDGPPRPRGRPRIRPLEVPTTAGPASASTPTDGAK----KP 1200
Query: 86 TGAGQRFGTPASLTTRDPEAKVGFLKPVGPKPINLPKEDSKPTFPWPPGNKPSLHSVNQD 145
G G+ G A EA L+P+ P I L + G+ S D
Sbjct: 1201 RGRGRGRGRKAE------EAGGTRLEPLKPLKIKLSVPKAGEGLGTSSGDAIS----GTD 1250
Query: 146 HDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKPAF--GQKPP 203
H+ S T E + K+ K +K FM++ D P + G PP
Sbjct: 1251 HN----SLDSSLTREKIEAKIKEVEEKQPEMKSGFMASFLDFLKSGKRHPPLYQAGLTPP 1306
Query: 204 LSTENSHEDESPMKNVSSSKGS------PAPLGVRSKSGPLKPAREDSENKDHAGEISSL 257
LS S P + + + P P G G L+ A + G
Sbjct: 1307 LSPPKSVPPSVPARGLQPQPPATPAVPHPPPSGAFGLGGALEAAESE-------GLGLGC 1359
Query: 258 PFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNT-FQSKINQEELASGTPPARFPK- 315
P P L R L ++++ AKN Q I+ A PP PK
Sbjct: 1360 PSPCKRLDEELKRNLETLPSFSSDEEDS----VAKNRDLQESISSAISALDDPPLAGPKD 1415
Query: 316 ---------APSKLTVGGPW--GQSQEKEKGDKNSATPKQKPLP---PLFTLGPPPPKPN 361
AP+ G P G G ++KP P P T P PP P
Sbjct: 1416 TSTPDGPPLAPAAAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPP 1475
Query: 362 RPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPPLPASHPSQPPVPSLPP 421
PP L S T S PPPPP P P +P+ P PP P+ P
Sbjct: 1476 PPPQPALP-----------SPPPLVAPTPSSPPPPPLPPPPPPAMPS--PPPPPPPAAAP 1522
Query: 422 RNIKPPFDLKSPVNEDNQDGVTHSDGAGNLDEEQDSEGETYEDIEASKEREKKREKEE 479
PP + +P ED + T E GET E+ S RE++E
Sbjct: 1523 L-AAPPEEPAAPSPEDPELPDTRPLHLAKKQETAAVCGETDEEAGESGGEGIFRERDE 1579
Score = 40.0 bits (92), Expect = 0.008
Identities = 97/468 (20%), Positives = 147/468 (31%), Gaps = 63/468 (13%)
Query: 62 PPVAVKPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRDPEAKVGFLKPVGPKPINLP 121
PP+A P PD P P G G P++ + PE + KP P P P
Sbjct: 1408 PPLA-GPKDTSTPDGPPLAPAAAVPGPPPLPGLPSANSNGTPEPPLLEEKPP-PTPPPAP 1465
Query: 122 KEDSKPTFPWPPGNKPSLHSVNQDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKFM 181
+P P PP +P+L S P P P PP P
Sbjct: 1466 TPQPQPPPP-PPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPLA 1524
Query: 182 SASQDLEPKPLFPKPAFGQKP---PLSTENSHEDESPMKNVSSSKGSPAPLGVRSKSGPL 238
+ ++ P P P + P PL E + G G+ +
Sbjct: 1525 APPEE----PAAPSPEDPELPDTRPLHLAKKQETAAVCGETDEEAGESGGEGIFRERDEF 1580
Query: 239 KPAREDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRK-----IDAAKN 293
ED + A + P P ++ A + K+G+ + AKN
Sbjct: 1581 VIRAEDIPSLKLALQTGREPPPIWRVQKALLQKFTPEIKDGQRQFCATSNYLGYFGDAKN 1640
Query: 294 TFQ-------SKINQEELAS--GTPPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQ 344
+Q +N+++ P P P + + GQ++ +SA P +
Sbjct: 1641 RYQRLYVKFLENVNKKDYVRVCARKPWHRPPVPVRRS-----GQAKNPVSAGGSSAPPPK 1695
Query: 345 KPLPP------------------LFTLGPPPPKPNRP----PNVDLTKFHKTSSGNSTSK 382
P PP T P PP P +P P + K + G +
Sbjct: 1696 APAPPPKPETPEKTTSEKPPEQTPETAMPEPPAPEKPSLLRPVEKEKEKEKVTRGERPLR 1755
Query: 383 GQTSYSTTSLPPPPPSHPASQPPLPASHPSQPPVPSLPPRNIK---PPFDLKSPVNEDNQ 439
G+ + S P + L P+ +P P +K PP K + E
Sbjct: 1756 GERATSGRQTRP--------ERSLATGQPATSRLPKARPTKVKAEPPPKKRKKWLKEAGG 1807
Query: 440 DGVTHSDGAGNLDEEQDSEGETYEDIEASKER-EKKREKEEKKRLELE 486
+ G+ + + S G ED A R K R E R +E
Sbjct: 1808 NATAGGGPPGSSSDSESSPGAPSEDERAVPGRLLKTRAMREMYRSYVE 1855
Score = 37.4 bits (85), Expect = 0.054
Identities = 85/349 (24%), Positives = 108/349 (30%), Gaps = 68/349 (19%)
Query: 76 KEPKPPFLKPTGAGQRFGTPASLTTRDPEAKVGFLKPVGPKPINLPKEDSKPTFPWPPGN 135
K P PP P A TP L + + P P P LP S P P +
Sbjct: 762 KSPPPP---PPTAQSTQPTPHGLLLEAGGPDLPLVLPP-PPPQLLPSVLSHAPSPSPSAS 817
Query: 136 KPSLHSVNQ-DHDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKFMSASQDLEPKPLFP 194
K +H + D P P P PP Q +A + S LEP
Sbjct: 818 KVGVHLLEPATRDGAPQPPPPPPPPPPPMPLQLEAHLR-----------SHGLEPA---- 862
Query: 195 KPAFGQKPPLSTENSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKPAREDSENKDHAGEI 254
P L E S + M+ + + P + GP +SE KD AG
Sbjct: 863 ----APSPRLRPEESLDPPGAMQELLGALEPLPPAPGDTGVGP-----PNSEGKDPAGAY 913
Query: 255 SSLPFPGVVLK---PAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELASGTPPA 311
S G P S P EE+ + F + EE+ G
Sbjct: 914 RSPSPQGTKAPRFVPLTSICFPDSLLQDEER----------SFFPT---MEEMFGGGAAD 960
Query: 312 RFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFT-----LGPPPP----KPNR 362
+ KA G P + K P P P GP P PN+
Sbjct: 961 DYGKA------GPPEDEGDPKAGAGPPPGPPAYDPYGPYCPGRASGAGPETPGLGLDPNK 1014
Query: 363 PPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPPLPASHP 411
PP + S+ N+ G PPPP P PP PAS P
Sbjct: 1015 PPELP-------STVNAEPLGLIQSGPHQAAPPPPP-PPPPPPAPASEP 1055
Score = 35.4 bits (80), Expect = 0.21
Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 6/114 (5%)
Query: 310 PARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKPNRPPNVDL- 368
P++ P PS L G G + TP +P PP PPPP + P +L
Sbjct: 193 PSQAPTVPSSLGFERLAGGGVLGPAGLGPAQTPPYRPGPP----DPPPPPRHLPTQFNLL 248
Query: 369 -TKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPPLPASHPSQPPVPSLPP 421
+ ++ +S ++S + PPPP + H +P PP
Sbjct: 249 ASSSAAAAAAEQSSPQLYNFSGAAPGPPPPERALPRQDTVIKHYQRPASAQPPP 302
Score = 33.1 bits (74), Expect = 1.0
Identities = 59/246 (23%), Positives = 92/246 (37%), Gaps = 36/246 (14%)
Query: 25 GPNSSSGIQARKNLFNNQGNASPPAGPSNVPKFGSPKPPVAVKPSSEEKPDKEPKPPFLK 84
GP++S + + ++G P+ S + +F SP A+ P P L
Sbjct: 83 GPDAS--VMNLISALESRGPQPGPSASSLLSQFRSPSWQTAMHT---------PGPTELF 131
Query: 85 PTGAGQRFGTPASLTTRDPEAKVGFLKPV--GPKPINLPKEDSKPTFPW-PPGNKPSLHS 141
+GA P S T A + P G +P +P S P+ PP N
Sbjct: 132 ISGA-----LPGSSTFPSSSALSAYQHPASFGSRPFPVPSSLSLQDPPFSPPAN-----G 181
Query: 142 VNQDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKPAFGQK 201
+ HD+ L P PT P+S ++ A + G G + + P P P P
Sbjct: 182 LLSPHDVLHLKPSQAPTVPSSLGFERLAGGGVLGPAGLGPAQTPPYRPGPPDPPP----- 236
Query: 202 PP--LSTENSHEDESPMKNVSSSKGSPAPLGVRSKS-GPLKP----AREDSENKDHAGEI 254
PP L T+ + S ++ + SP + GP P R+D+ K +
Sbjct: 237 PPRHLPTQFNLLASSSAAAAAAEQSSPQLYNFSGAAPGPPPPERALPRQDTVIKHYQRPA 296
Query: 255 SSLPFP 260
S+ P P
Sbjct: 297 SAQPPP 302
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 60.1 bits (144), Expect = 8e-09
Identities = 84/322 (26%), Positives = 102/322 (31%), Gaps = 52/322 (16%)
Query: 111 KPVGPKPINLPKEDSKPTFPWPPGNKPSLHSVNQDHDLKPLGPKSGPT-PPTSENEQKQA 169
KP GP P + +KP P PPG KP D P P P PP Q Q
Sbjct: 56 KPQGPPP----QGGNKPQGPPPPG-KPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQG 110
Query: 170 FPKLTGVKGKFMSASQDLEPKPLFPKPAFGQKPPLSTENSHEDESPMKNVSSSKGSPAPL 229
P G + P P P Q PP + S SP P P
Sbjct: 111 PPPPPGKPQGPPPQGGNRPQGP--PPPGKPQGPPPQGDKSRSPRSP----PGKPQGPPPQ 164
Query: 230 GVRSKSGPLKPAREDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKID 289
G GP P + G+ P P P +G P G++ +
Sbjct: 165 GGNQPQGPPPPPGKPQGPPPQGGKKPQGPPP-----PGKPQGPP---PQGDKSR------ 210
Query: 290 AAKNTFQSKINQEELASGTPPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKPLPP 349
+S +PP + P+ P GG Q G P+ P
Sbjct: 211 ---------------SSQSPPGK-PQGPPPQ--GGNQPQGPPPPPGKPQGPPPQGGNKPQ 252
Query: 350 LFTLGPPPP-KPNRPPNVDLTKFHKTSS--GNSTSKGQTSYSTTSLPPPPPSHPASQPPL 406
GPPPP KP PP +K S G Q + PPPP QP
Sbjct: 253 ----GPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQA 308
Query: 407 -PASHPSQPPVPSLPPRNIKPP 427
PA P PP P R +PP
Sbjct: 309 PPAGQPQGPPRPPQGGRPSRPP 330
Score = 48.9 bits (115), Expect = 2e-05
Identities = 35/113 (30%), Positives = 45/113 (39%), Gaps = 8/113 (7%)
Query: 315 KAPSKLTVGGPWGQSQEKEKGDKNSATPKQKPLPPL-----FTLGPPPP-KPNRPP-NVD 367
++PS L G P G S + + P KP P GPPPP KP PP D
Sbjct: 27 ESPS-LIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGD 85
Query: 368 LTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPPLPASHPSQPPVPSLP 420
++ ++ G + PPPPP P PP + P PP P P
Sbjct: 86 KSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKP 138
Score = 41.6 bits (96), Expect = 0.003
Identities = 54/249 (21%), Positives = 72/249 (28%), Gaps = 20/249 (8%)
Query: 205 STENSHEDESPMKNVSSSKGSP---APLGVRSKSGPLKPAREDSENKDHAGEISSLPFPG 261
S +N +ED S ++ S G+P +P G GP P + G P P
Sbjct: 15 SAQNLNEDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPP 74
Query: 262 VVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELASGTPPARFPKAPSKLT 321
+ +G S K N Q G PP +
Sbjct: 75 GKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPP 134
Query: 322 VGGPWGQSQEKEKG--------------DKNSATPKQKPLPPLFTLGPPPP---KPNRPP 364
G P G + +K + P+ P PP GPPP KP PP
Sbjct: 135 PGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPP 194
Query: 365 NVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPPLPASHPSQPPVPSLPPRNI 424
+ S S PP + P PP P PP P+
Sbjct: 195 PPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGP 254
Query: 425 KPPFDLKSP 433
PP + P
Sbjct: 255 PPPGKPQGP 263
Score = 37.4 bits (85), Expect = 0.054
Identities = 49/181 (27%), Positives = 52/181 (28%), Gaps = 45/181 (24%)
Query: 15 SVNSRPFRVTGPNSSSGIQARKNLFNNQGNASPPAGPSNVPKFGSPKP---PVAVKP--- 68
S S P + GP G Q QG PP P P G KP P KP
Sbjct: 150 SPRSPPGKPQGPPPQGGNQP-------QGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGP 202
Query: 69 --------SSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRDPEAKVGFLKPVGPKPINL 120
SS+ P K PP P G Q G P G KP GP P
Sbjct: 203 PPQGDKSRSSQSPPGKPQGPP---PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGK 259
Query: 121 P---------KEDSKPTFPWPPGNKPSLHSVN------------QDHDLKPLGPKSGPTP 159
P K S + P P P N Q P G GP
Sbjct: 260 PQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPR 319
Query: 160 P 160
P
Sbjct: 320 P 320
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 59.7 bits (143), Expect = 1e-08
Identities = 110/494 (22%), Positives = 165/494 (33%), Gaps = 121/494 (24%)
Query: 67 KPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRDPEAKVGFLKPVGPKPINLPKEDSK 126
K E P P PP+L G P +R P L+ GP+P+
Sbjct: 819 KGMRSETPPVPPPPPYLASYPGFPENGAPGPPISRFP------LEEPGPRPL-------- 864
Query: 127 PTFPWPPGNK--------PSLHSVNQDHDLKPLGPKSG-------------PTPPTSENE 165
PWPPG+ P ++ + GP++G P PP E+
Sbjct: 865 ---PWPPGSDEVAKIQTPPPKKEPPKEETAQLTGPEAGRKPARGVGSGGQGPPPPRRESR 921
Query: 166 QKQAFPKLTGVKGKFMSASQDLEPK-PLFPKPAFG--QKPPLSTENSHEDESPMKNVSSS 222
+ + G S+ + + P+ P P G +KPP T+ P++ +
Sbjct: 922 TETRWGPRPG------SSRRGIPPEEPGAPPRRAGPIKKPPPPTKVEELPPKPLEQGDET 975
Query: 223 KGSPAPLGVRSKSGPLKPAREDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEK 282
P P ++ G L +E N G +S P P + + R GP S G +
Sbjct: 976 PKPPKPDPLKITKGKLGGPKETPPN----GNLS--PAPRLRRDYSYERVGP-TSCRGRGR 1028
Query: 283 KE-------------DRKIDAAKNTFQSKIN---QEELASGTPPARFPKAPSKLTVGGPW 326
E R A F+S + GT P AP T
Sbjct: 1029 GEYFARGRGFRGTYGGRGRGARSREFRSYREFRGDDGRGGGTGGPNHPPAPRGRTASETR 1088
Query: 327 GQSQEKEK-----------------------GDKNSATPKQKPLPPLFTLGPPPPKPNRP 363
+ E E+ DK + TPK+ L + L PPPP P
Sbjct: 1089 SEGSEYEEIPKRRRQRGSETGSETHESDLAPSDKEAPTPKEGTLTQV-PLAPPPP--GAP 1145
Query: 364 PNVDLTKFHKTSSGNSTSKGQTSYSTTSLP---------PPPPSHPASQPPLPASHPSQP 414
P+ +F T++G ++ +P PPP P PP + P +P
Sbjct: 1146 PSPAPARF--------TARGGRVFTPRGVPSRRGRGGGRPPPQVCPGWSPPAKSLAPKKP 1197
Query: 415 PVPSLPPRNIKPPFDLK---SPVNEDNQDGVTHSDGAGNLDEEQD---SEGETYEDIEAS 468
P LPP K P K P++ + G G D E+ G + +
Sbjct: 1198 PTGPLPPS--KEPLKEKLIPGPLSPVARGGSNGGSNVGMEDGERPRRRRHGRAQQQDKPP 1255
Query: 469 KEREKKREKEEKKR 482
+ R K+E+E R
Sbjct: 1256 RFRRLKQERENAAR 1269
Score = 59.3 bits (142), Expect = 1e-08
Identities = 106/509 (20%), Positives = 180/509 (35%), Gaps = 87/509 (17%)
Query: 25 GPNSSSGIQARKNLFNNQGNASPPAGPSNVPKFGSPKPPVAVKPSSEEKPDKEPKPPFLK 84
GP+ G ++ + ++ P+GP P + PP P P P+ P+
Sbjct: 214 GPDELEGPDSKLHHGHDPRGGLQPSGPPQFPPYRGMMPPFMYPPYLPFPPPYGPQGPYRY 273
Query: 85 PTGAG-QRFGTPASLTTRDPEAKVGFLKPVGPKPINLPKEDSKPTFP---------WPPG 134
PT G RF A P ++ ++PVG +P ++ KED+ F W
Sbjct: 274 PTPDGPSRFPRVAGPRGSGPPMRL--VEPVG-RP-SILKEDNLKEFDQLDQENDDGWAGA 329
Query: 135 N-------KPSLHSVNQDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKFMSASQDL 187
+ K D G + ++ E++ P+ G KG ++
Sbjct: 330 HEEVDYTEKLKFSDEEDGRDSDEEGAEGHRDSQSASGEERP--PEADGKKGNSPNS---- 383
Query: 188 EPKPLFPKPAFGQ--KPPLSTENSHEDESPM----KNVSSSKGSPAPLGVRSKSGPLKPA 241
+P PK A+ + +PP + + P+ + + + G P R PA
Sbjct: 384 --EPPTPKTAWAETSRPPETEPGPPAPKPPLPPPHRGPAGNWGPPGDYPDRGGPPCKPPA 441
Query: 242 REDSEN------KDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNT- 294
ED + K + EIS A R + +E+R+ A+
Sbjct: 442 PEDEDEAWRQRRKQSSSEISL----------AVERARRRREEEERRMQEERRAACAEKLK 491
Query: 295 -FQSKINQEELASGTPPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTL 353
K + PA P APS T P + KE + P P P
Sbjct: 492 RLDEKFGAPDKRLKAEPAAPPAAPS--TPAPP--PAVPKELPAPPAPPPASAPTPETEPE 547
Query: 354 GP---PPPKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPPLPASH 410
P PP + P V + G+++S S+ + + P PS +PP
Sbjct: 548 EPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSKEGPEPPEEVPP 607
Query: 411 PSQPPVPSLPPRNIKPPFDLKSPVNEDNQDGVTHSDGAGNLDEEQDSEGETYEDIEASKE 470
P+ PPVP + P+ DG G + S+G Y + S
Sbjct: 608 PTTPPVPKVEPK----------------------GDGIGP-TRQPPSQGLGYPKYQKSLP 644
Query: 471 REKKREKEEKKRLELEKKEQKEKEKKEQE 499
+R+++E +L K++Q+ + ++ Q+
Sbjct: 645 PRFQRQQQE----QLLKQQQQHQWQQHQQ 669
Score = 53.1 bits (126), Expect = 1e-06
Identities = 95/397 (23%), Positives = 133/397 (33%), Gaps = 65/397 (16%)
Query: 69 SSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRDPEAKVGFLKPVGPKPINLPKEDSKPT 128
S EE+P + P T + T+R PE + G P PKP LP P
Sbjct: 365 SGEERPPEADGKKGNSPNSEPPTPKTAWAETSRPPETEPG---PPAPKP-PLPPPHRGPA 420
Query: 129 FPW-PPGNKPSLHSVNQDHDLKPLGPKSGPTPPTSENE-----QKQAFPKLTGVKGKFMS 182
W PPG+ P GP P P E+E +KQ+ +++ +
Sbjct: 421 GNWGPPGDYPDRG-----------GPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARR 469
Query: 183 ASQDLEPKPLFPK-PAFGQKPPLSTENSHEDESPMKNVSSSK----GSPAPLGVRSKSGP 237
++ E + + A +K E + +K ++ +PAP K P
Sbjct: 470 RREEEERRMQEERRAACAEKLKRLDEKFGAPDKRLKAEPAAPPAAPSTPAPPPAVPKELP 529
Query: 238 LKPA---------REDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKI 288
PA + E A S P PGV P GG S E +
Sbjct: 530 APPAPPPASAPTPETEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPV 589
Query: 289 DAAKNTFQSKINQEELASGTPPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPK-QKPL 347
+ + + EE+ T P PK K GP Q + G PK QK L
Sbjct: 590 EPQLPSKEGPEPPEEVPPPTTPP-VPKVEPKGDGIGPTRQPPSQGLG-----YPKYQKSL 643
Query: 348 PPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPPLP 407
PP F R L K + +G S T +PP PP P + +P
Sbjct: 644 PPRF---------QRQQQEQLLKQQQQHQWQQHQQG--SAPPTPVPPSPPQ-PVTLGAVP 691
Query: 408 ASHPSQPP-----------VPSLPPRNIKPPFDLKSP 433
A PP P +PP N P + + P
Sbjct: 692 APQAPPPPPKALYPGALGRPPPMPPMNFDPRWMMIPP 728
Score = 45.1 bits (105), Expect = 3e-04
Identities = 93/407 (22%), Positives = 138/407 (33%), Gaps = 104/407 (25%)
Query: 41 NQGNASPPAGPSNVPKFGS-PKPPVAVKPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLT 99
++ + +P + PK G+ + P+A P P P P + T G R TP +
Sbjct: 1113 HESDLAPSDKEAPTPKEGTLTQVPLAPPP-----PGAPPSPAPARFTARGGRVFTPRGVP 1167
Query: 100 TR--------DPEAKVGFLKPVGPKPINLPKEDSKPTFPWPPGNKPSLHSVNQDHDLKPL 151
+R P+ G+ P P PT P PP +P + L P+
Sbjct: 1168 SRRGRGGGRPPPQVCPGWSPPAKSLAPKKP-----PTGPLPPSKEPLKEKLIPG-PLSPV 1221
Query: 152 -----------GPKSGPTPPTSEN---EQKQAFPKLTGVKGKFMSASQDLEPKPLFPKPA 197
G + G P + +Q+ P+ +K + +A++ E KP PA
Sbjct: 1222 ARGGSNGGSNVGMEDGERPRRRRHGRAQQQDKPPRFRRLKQERENAARGSEGKPSLTLPA 1281
Query: 198 FGQKPPLSTENSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKPAREDSENKDHAGEISSL 257
P E + V+ + PAP +KS L D N++ S
Sbjct: 1282 SAPGP----------EEALTTVTVA---PAPRRAAAKSPDLSNQNSDQANEEWETASESS 1328
Query: 258 PF-----------PGVVLKPAA--SRGG------PGLSKNGEEKKEDRKIDAAKNTFQSK 298
F P V+L P A + GG PG+S R D +K +F S+
Sbjct: 1329 DFTSERRGDKEAPPPVLLTPKAVGTPGGGGGGAVPGISAMSRGDLSQRAKDLSKRSFSSQ 1388
Query: 299 INQEELASGTPPARFPKAPSKLTVGGPWGQSQEKE---KGDKNS-ATPKQKPLPPLFTLG 354
E + P S + GG G + +GDK S +PK + PP
Sbjct: 1389 RPGMERQNRRPGPGGKAGSSGSSSGGGGGGPGGRTGPGRGDKRSWPSPKNRSRPP----- 1443
Query: 355 PPPPKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPA 401
RPP + L PPPPPS A
Sbjct: 1444 -----EERPPGLPL------------------------PPPPPSSSA 1461
Score = 39.7 bits (91), Expect = 0.011
Identities = 91/390 (23%), Positives = 140/390 (35%), Gaps = 88/390 (22%)
Query: 132 PPGNKPSLHSVNQDHDLK-PLGPKSGPTPPTSENEQKQAFPKLTGVKGKFMSASQDLEPK 190
PP N PSL + N+ +D L PK G ++Q+Q+ PK + + + +P
Sbjct: 58 PPANLPSLKAENKGNDPNVSLVPKDG---TGWASKQEQSDPKSSDAS---TAQPPESQPL 111
Query: 191 PLFPKPAFGQ--KPPLSTENSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKPAREDSENK 248
P PA Q +PP + EN +P+ P GV+S + A
Sbjct: 112 PASQTPASNQPKRPPAAPEN-----TPL----------VPSGVKSWA----QASVTHGAH 152
Query: 249 DHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELASGT 308
G SSL L + P L G++ K ++ ++A E +SG
Sbjct: 153 GDGGRASSL------LSRFSREEFPTLQAAGDQDKAAKERESA-----------EQSSGP 195
Query: 309 PPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKPNR---PPN 365
P+ P+ + GG G+ ++ +G + P L GPP P R PP
Sbjct: 196 GPSLRPQNSTTWRDGG--GRGPDELEGPDSKLHHGHDPRGGLQPSGPPQFPPYRGMMPPF 253
Query: 366 VDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPAS--QPPLPASHPSQPPVPSLPPRN 423
+ LP PPP P + P P P V PR
Sbjct: 254 M---------------------YPPYLPFPPPYGPQGPYRYPTPDGPSRFPRVAG--PRG 290
Query: 424 IKPPFDLKSPVNEDN---QDGVTHSDGAGNLDEEQD-------SEGETYEDIEASKEREK 473
PP L PV + +D + D LD+E D E + E ++ S E +
Sbjct: 291 SGPPMRLVEPVGRPSILKEDNLKEFD---QLDQENDDGWAGAHEEVDYTEKLKFSDEEDG 347
Query: 474 KREKEEKKRLELEKKEQKEKEKKEQEIKKK 503
+ EE + + +E+ + KK
Sbjct: 348 RDSDEEGAEGHRDSQSASGEERPPEADGKK 377
Score = 35.0 bits (79), Expect = 0.27
Identities = 32/133 (24%), Positives = 47/133 (35%), Gaps = 12/133 (9%)
Query: 357 PPKPNRP----------PNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPPL 406
PP N P PNV L T + + S S PP S P
Sbjct: 57 PPPANLPSLKAENKGNDPNVSLVPKDGTGWASKQEQSDPKSSDASTAQPPESQPLPASQT 116
Query: 407 PASHPSQPPVPSLPPRNIKPPFDLKSPVNEDNQDGVTHSDGAGNLDEEQDSEGETYEDIE 466
PAS+ + P P+ P P +KS G H DG E + ++
Sbjct: 117 PASNQPKRP-PAAPENTPLVPSGVKSWAQASVTHG-AHGDGGRASSLLSRFSREEFPTLQ 174
Query: 467 ASKEREKKREKEE 479
A+ +++K ++ E
Sbjct: 175 AAGDQDKAAKERE 187
Score = 30.4 bits (67), Expect = 6.6
Identities = 70/327 (21%), Positives = 107/327 (32%), Gaps = 65/327 (19%)
Query: 115 PKPINLPKEDSKPTFPWPPG--NKPSLHSVNQDHDLKPLGPKSGPTPPTSENEQKQAFPK 172
PK + P E+ P P PP + ++ ++Q P G + QA +
Sbjct: 1436 PKNRSRPPEERPPGLPLPPPPPSSSAVFRLDQVIHSNPAGIQ-------------QALAQ 1482
Query: 173 LTGVKGKFMSASQDLEPKPLFPKPAFGQKPP-------------LSTENSHEDESPMKNV 219
L+ +G + KP P+ G P LS++ E+ PM V
Sbjct: 1483 LSSRQGSVTAPGGHPRHKPGLPQAPQGPSPRPPTRYEPQRVNSGLSSDPHFEEPGPM--V 1540
Query: 220 SSSKGSPAPLGVRSKSGPLKPAREDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNG 279
G+P S P + RE K + SLP P + GPG
Sbjct: 1541 RGVGGTPRDSAGVSPFPPKR--RERPPRKPELLQEESLPPPHSSGFLGSKPEGPG----P 1594
Query: 280 EEKKEDRKIDAAKNTFQSKINQEELASGTPPARFPKAPSKLTVGGPWGQSQEKEKGDKNS 339
+ + D +A ++++ T +R PS + PW
Sbjct: 1595 QAESRDTGTEALTPHIWNRLH-------TATSRKSYRPSSME---PW------------- 1631
Query: 340 ATPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSH 399
+PL P + + VDL+ + SSG + + PP
Sbjct: 1632 ----MEPLSPFEDVAGTEMSQS-DSGVDLSGDSQVSSGPCSQRSSPDGGLKGAAEGPPKR 1686
Query: 400 PASQPPLPASHPSQPPVPSLPPRNIKP 426
P PL A P + P S PPR P
Sbjct: 1687 PGGSSPLNAV-PCEGPPGSEPPRRPPP 1712
>gi|148727255 microtubule associated serine/threonine kinase family
member 4 isoform a [Homo sapiens]
Length = 2434
Score = 59.7 bits (143), Expect = 1e-08
Identities = 105/438 (23%), Positives = 157/438 (35%), Gaps = 79/438 (18%)
Query: 53 NVPKFGSPKPPVAVKPSSEEKPDKEPKPPF----LKPTGAGQRFGTPASLTTRDPEAKVG 108
++ K G+ +P +P + P P PP L A Q +P+ + R+P AK
Sbjct: 1921 SLQKDGAKEPERKEQPL-QRHPSSIPPPPLTAKDLSSPAARQHCSSPSHASGREPGAK-- 1977
Query: 109 FLKPVGPKPINLPKEDSKPTFPWPPGNKPSLHSVNQDHDLKPLGPKSGPT----PPTSEN 164
P +P + P++ KP + HS + H +P GP GP P S +
Sbjct: 1978 ---PSTAEPSSSPQDPPKPV---------AAHSESSSHKPRP-GPDPGPPKTKHPDRSLS 2024
Query: 165 EQKQAFPKLTGVKGKFMSASQDL------------EPKPLFP---------KPAFGQKPP 203
QK P + KGK A+Q L +FP GQ
Sbjct: 2025 SQK---PSVGATKGK-EPATQSLGGSSREGKGHSKSGPDVFPATPGSQNKASDGIGQGEG 2080
Query: 204 LSTENSHEDESPMKNVSSSKGSPAPLGVRSKS---------GPLKPAREDSENKDHAGEI 254
+ H D +P+ PL V K GP +PA + GE
Sbjct: 2081 GPSVPLHTDRAPLDAKPQPTSGGRPLEVLEKPVHLPRPGHPGPSEPA---DQKLSAVGEK 2137
Query: 255 SSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELASG---TPPA 311
+L KP+ + P L K + ++ D K+ Q N + A G T
Sbjct: 2138 QTLSPKHP--KPSTVKDCPTLCKQTDNRQTD------KSPSQPAANTDRRAEGKKCTEAL 2189
Query: 312 RFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKPNRPPNVDLTKF 371
P KL G + S+ + KG + A K P GP P KP P D
Sbjct: 2190 YAPAEGDKLEAGLSFVHSENRLKGAERPAAGVGKGFPEARGKGPGPQKP--PTEADKPNG 2247
Query: 372 HKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPPLPAS--HPSQPPVPSLPPRNIKPPFD 429
K S ++ GQ+S+ +T+LP S +S P A S + + +
Sbjct: 2248 MKRS---PSATGQSSFRSTALPEKSLSCSSSFPETRAGVREASAASSDTSSAKAAGGMLE 2304
Query: 430 LKSPVNEDNQDGVTHSDG 447
L +P N D++ +G
Sbjct: 2305 LPAPSNRDHRKAQPAGEG 2322
Score = 32.7 bits (73), Expect = 1.3
Identities = 28/117 (23%), Positives = 48/117 (41%), Gaps = 15/117 (12%)
Query: 331 EKEKGDKNSATP------------KQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGN 378
E EK +K S+ P K++PL + PPPP + + + H +S +
Sbjct: 1909 ESEKSEKLSSFPSLQKDGAKEPERKEQPLQRHPSSIPPPPLTAKDLSSPAARQHCSSPSH 1968
Query: 379 STSKGQTSYSTTSLP---PPPPSHPASQPPLPASHPSQPPVPSLPPRNIKPPFDLKS 432
++ + + +T+ P P P P + +SH +P PP+ P L S
Sbjct: 1969 ASGREPGAKPSTAEPSSSPQDPPKPVAAHSESSSHKPRPGPDPGPPKTKHPDRSLSS 2025
Score = 30.4 bits (67), Expect = 6.6
Identities = 74/365 (20%), Positives = 114/365 (31%), Gaps = 66/365 (18%)
Query: 132 PPGNKPSLHSVNQDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKFMSASQDLEPKP 191
P +K L S P G PP P +G K SA ++L P
Sbjct: 1624 PQASKTELPSPESAQSPSPSGDVRASVPPV--------LPSSSGKKNDTTSA-RELSPSS 1674
Query: 192 LFPKPAFGQKP-----PLSTENSHEDESPMKNVSSSKGSPAPL----GVRSKSGPLKPAR 242
L ++ +P +NS P + P P G +S P +
Sbjct: 1675 LKMNKSYLLEPWFLPPSRGLQNSPAVSLPDPEFKRDRKGPHPTARSPGTVMESNPQQREG 1734
Query: 243 EDSENKDHAGEIS------------SLPFPGVVLKPAAS--RGGPGLSKNGEE------- 281
+++DH + L P L P AS R PGL ++ E
Sbjct: 1735 SSPKHQDHTTDPKLLTCLGQNLHSPDLARPRCPLPPEASPSREKPGLRESSERGPPTARS 1794
Query: 282 KKEDRKIDAAKN---------TFQSKINQEELAS--GTPPARFPKAPSKLTVGGPWGQSQ 330
++ + D + T ++ N + L S T P + + + P G++
Sbjct: 1795 ERSAARADTCREPSMELCFPETAKTSDNSKNLLSVGRTHPDFYTQTQAMEKAWAPGGKTN 1854
Query: 331 EKEKGDKNSATPKQKPLPPLFTLGPPPPKP--------NRPPNVDLTKFHKTSSGNSTSK 382
K+ A P + L + G P K P L + G + K
Sbjct: 1855 HKD--GPGEARPPPRDNSSLHSAGIPCEKELGKVRRGVEPKPEALLARRSLQPPGIESEK 1912
Query: 383 GQTSYSTTSLPPPPPSHPASQPPLPASHPSQPPVPSLPPRNIKPPFDLKSPVNEDNQDGV 442
+ S SL P + HPS P P L + DL SP +
Sbjct: 1913 SEKLSSFPSLQKDGAKEPERKEQPLQRHPSSIPPPPLTAK------DLSSPAARQHCSSP 1966
Query: 443 THSDG 447
+H+ G
Sbjct: 1967 SHASG 1971
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 59.3 bits (142), Expect = 1e-08
Identities = 82/370 (22%), Positives = 131/370 (35%), Gaps = 34/370 (9%)
Query: 47 PPAGPSNVPKFGSPKPPVAVKPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRDPEAK 106
P PS SP+PP +V +K P P KP A+L+ P+ +
Sbjct: 172 PSPEPSKPASVSSPEPPKSVPVCESQKLAPVPSPEPQKPAPVSPE-SVKATLSNPKPQKQ 230
Query: 107 VGFLKPVGPKPINLPKEDSKPTFPWPPGNKPSLHSVNQDHDLKPLGPKSGPTPPTSENEQ 166
F + +GP + P+ P P G P+ S + P+ P+ E
Sbjct: 231 SHFPETLGPPSASSPESPVLAASPEPWGPSPAA-SPESRKSARTTSPEPRKPSPSESPEP 289
Query: 167 KQAFPKLTGVKGKFMSASQDLEPKPLFP-KPAFGQKPPLSTENSHEDESPMKNVSSSKGS 225
+ FP ++ + A KP P P + P ++ + P +VS
Sbjct: 290 WKPFPAVSPEPRRPAPAVSPGSWKPGPPGSPRPWKSNPSASSGPWKPAKPAPSVSPGPWK 349
Query: 226 PAPLGVRSKSGPLKPAREDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKED 285
P P GP KP S + +S + P + + GP E
Sbjct: 350 PIP---SVSPGPWKPTPSVSSASWKSSSVSPSSWKSPPASPESWKSGP---------PEL 397
Query: 286 RKIDAAKNTFQSKINQEELASGTPPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQK 345
RK S + + + +P R P P + P G + + K
Sbjct: 398 RKTAPT----LSPEHWKAVPPVSPELRKPGPPLSPEIRSPAGSPELR----------KPS 443
Query: 346 PLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPP 405
P L+ L P K + P ++D + K+S G S ++S+ + P P P ++ P
Sbjct: 444 GSPDLWKLSPDQRKTS-PASLDFPESQKSSRGGSPDLWKSSF---FIEPQKPVFPETRKP 499
Query: 406 LPASHPSQPP 415
P S PS+ P
Sbjct: 500 GP-SGPSESP 508
Score = 35.8 bits (81), Expect = 0.16
Identities = 45/159 (28%), Positives = 57/159 (35%), Gaps = 37/159 (23%)
Query: 301 QEELASGTPPARFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFT------LG 354
+ +L T P + P P E +K NSA PK P + T L
Sbjct: 96 KNQLNKETDPVKSPPLP-------------EHQKIPCNSAEPKSIPALSMETQKLGSVLS 142
Query: 355 PPPPKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPA--SQPPLPASHP- 411
P PKP LT G+ S T LP P PS PA S P P S P
Sbjct: 143 PESPKPT-----PLTPLEPQKPGSVVSPELQ----TPLPSPEPSKPASVSSPEPPKSVPV 193
Query: 412 ----SQPPVPSLPPRNIKP--PFDLKSPVNEDNQDGVTH 444
PVPS P+ P P +K+ ++ +H
Sbjct: 194 CESQKLAPVPSPEPQKPAPVSPESVKATLSNPKPQKQSH 232
>gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo
sapiens]
Length = 956
Score = 57.8 bits (138), Expect = 4e-08
Identities = 66/275 (24%), Positives = 113/275 (41%), Gaps = 32/275 (11%)
Query: 348 PPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPPLP 407
P + +L P N P ++ + + +S S+TS P PP+ P
Sbjct: 251 PQIKSLPATPQGKNMTPESEVLESFPEEDSVLSHSSLSSPSSTSSPEGPPAPPKQ----- 305
Query: 408 ASHPSQPPVP-SLPPRNIKPPFDLKSPVNEDNQDGVTHSDGAGN---LDEEQDSEGETYE 463
H S P P S P R I F +K ++ + G L E++ + + E
Sbjct: 306 --HSSTSPFPTSTPLRRITKKF-VKGSTEKNKLRLQRDQERLGKQLKLRAEREEKEKLKE 362
Query: 464 DIEASKEREKKREKEEKKRLELEKKEQKEKEKKEQEIKKKFKLTGPIQVIHLAKACCDVK 523
+ + +KE KK+++EEK+ E E++E++EK++KE+ K++ K + +A + K
Sbjct: 363 EAKRAKEEAKKKKEEEKELKEKERREKREKDEKEKAEKQRLKEERRKERQEALEAKLEEK 422
Query: 524 GGKNELSFK-------QGEQIEIIRITDNPEGKWLGRTARGSYGYIKTTAVEIDYDSLKL 576
K E + E+ EI R P+ +T GS G + ++
Sbjct: 423 RKKEEEKRLREEEKRIKAEKAEITRFFQKPKTPQAPKTLAGSCG---------KFAPFEI 473
Query: 577 KKDSLGAPSRPIEDDQEVYDDVAEQDDISSHSQSG 611
K+ + AP R + D+ Q D QSG
Sbjct: 474 KEHMVLAPRR----RTAFHPDLCSQLDQLLQQQSG 504
Score = 30.8 bits (68), Expect = 5.1
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 674 KAKTEEKDLKKLKKQEKEEKDFRKK 698
K K EEK+LK+ +++EK EKD ++K
Sbjct: 373 KKKEEEKELKEKERREKREKDEKEK 397
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 57.8 bits (138), Expect = 4e-08
Identities = 121/553 (21%), Positives = 189/553 (34%), Gaps = 73/553 (13%)
Query: 22 RVTGPNSSSGIQARKNLFNNQGNASPPA----GPSNVPKFGSPKPPVAVKPSSEEKPDKE 77
R P+ G + N++G++ P S P SP+ + SS ++ +
Sbjct: 122 RPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQ 181
Query: 78 PKPPFLK-PTG-----AGQRFGTPASLTTRDPEAKVGFLKPVG-PKPINLPKEDSKPTFP 130
+PP L+ PTG + GTP L T P + P G P P + PT P
Sbjct: 182 AQPPALQAPTGVTPAPSSAPPGTP-QLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAP 240
Query: 131 WP-----------PGNKPSLHSVNQDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGV--- 176
P P PS H PL P +G S Q P L G
Sbjct: 241 VPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQ--PPLHGQGPP 298
Query: 177 ------KGKFMSASQDLEPKPLFPKPAFGQKPPLSTENSHEDESPMKNVSSSKGSPAPLG 230
G + +P L P+ + GQ P ++ + + ++ +S +
Sbjct: 299 GPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQP 358
Query: 231 VRSKSGPLKPAREDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDA 290
R + P P I LP P P G S N A
Sbjct: 359 PREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPP----A 414
Query: 291 AKNTFQSKINQEELASGTPPARFPKA-PSKLTVGGPWGQSQEKEKGDKNSATP-----KQ 344
K + A P P++ P + P G +Q + ++ P +
Sbjct: 415 LKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQV 474
Query: 345 KPLPPLFTL-----GPPP------PKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLP 393
P PP GPPP P + PP T SG + S G + +S P
Sbjct: 475 APQPPFAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIA-GGSSCP 533
Query: 394 PPP----------PSHPASQPPLPASHPSQPPV---PSLPPRNIKPPFDLKSPVNEDNQD 440
P P S PP P S +P V PS ++ + L N +
Sbjct: 534 LPTVQIKEEALDDAEEPESPPPPPRSPSPEPTVVDTPSHASQSARFYKHLDRGYNSCART 593
Query: 441 GVTHSDGAGNL----DEEQDSEGETYEDIEASKEREKKREKEEKKRLELEKKEQKEKEKK 496
+ AG+ EE + + + +A +ERE+++EKE+++ E E++ + E+ K
Sbjct: 594 DLYFMPLAGSKLAKKREEAIEKAKREAEQKAREEREREKEKEKEREREREREREAERAAK 653
Query: 497 EQEIKKKFKLTGP 509
+ +L+ P
Sbjct: 654 ASSSAHEGRLSDP 666
Score = 40.0 bits (92), Expect = 0.008
Identities = 87/428 (20%), Positives = 143/428 (33%), Gaps = 67/428 (15%)
Query: 47 PPAGPSNVPKFGSPK----PPVAVKPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRD 102
PP P +P+ +P+ PP PS P PP LKP + P++
Sbjct: 377 PPTTP--IPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPP-- 432
Query: 103 PEAKVGFLKPVGPKPINLPKEDSKPTFPWPPGNKP--SLHSVNQD-----HDLKPLGPK- 154
P + +P+ P P P PP + P LH V H P GP
Sbjct: 433 PLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPP 492
Query: 155 -------SGPTPPTSENEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKPAFGQKPPLSTE 207
S TPP Q P +G ++ + P P K + +
Sbjct: 493 ITPPTCPSTSTPPAGPGTSAQ--PPCSGAA----ASGGSIAGGSSCPLPTVQIKEE-ALD 545
Query: 208 NSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKPAR-----EDSENKDHAGEISSLPFPGV 262
++ E ESP S SP P V + S + AR + N ++ +P G
Sbjct: 546 DAEEPESPPPPPRSP--SPEPTVVDTPSHASQSARFYKHLDRGYNSCARTDLYFMPLAGS 603
Query: 263 VLKPAASRGGPGLSKNGEEK-KEDRKIDAAKNTFQSKINQEELASGTPPARFPKAPSKLT 321
L + E+K +E+R+ + K + + + E R + +K +
Sbjct: 604 KLAKKREEAIEKAKREAEQKAREEREREKEKEKERERERERE--------REAERAAKAS 655
Query: 322 VGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTS 381
G+ + + P +P P PP P+ P L+++ + + T+
Sbjct: 656 SSAHEGRLSDPQLSGPGHMRPSFEPPPTTIAAVPPYIGPDTPALRTLSEYARPHVMSPTN 715
Query: 382 KGQTSYSTTSLPPPPPSHPASQPPLPASHPSQPPVPSLPPR----------------NIK 425
+ Y P P+ P +P + P + R +K
Sbjct: 716 RNHPFYM-----PLNPTDPLLAYHMPGLYNVDPTIRERELREREIREREIRERELRERMK 770
Query: 426 PPFDLKSP 433
P F++K P
Sbjct: 771 PGFEVKPP 778
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 57.8 bits (138), Expect = 4e-08
Identities = 121/553 (21%), Positives = 189/553 (34%), Gaps = 73/553 (13%)
Query: 22 RVTGPNSSSGIQARKNLFNNQGNASPPA----GPSNVPKFGSPKPPVAVKPSSEEKPDKE 77
R P+ G + N++G++ P S P SP+ + SS ++ +
Sbjct: 676 RPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQ 735
Query: 78 PKPPFLK-PTG-----AGQRFGTPASLTTRDPEAKVGFLKPVG-PKPINLPKEDSKPTFP 130
+PP L+ PTG + GTP L T P + P G P P + PT P
Sbjct: 736 AQPPALQAPTGVTPAPSSAPPGTP-QLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAP 794
Query: 131 WP-----------PGNKPSLHSVNQDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGV--- 176
P P PS H PL P +G S Q P L G
Sbjct: 795 VPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQ--PPLHGQGPP 852
Query: 177 ------KGKFMSASQDLEPKPLFPKPAFGQKPPLSTENSHEDESPMKNVSSSKGSPAPLG 230
G + +P L P+ + GQ P ++ + + ++ +S +
Sbjct: 853 GPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQP 912
Query: 231 VRSKSGPLKPAREDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDA 290
R + P P I LP P P G S N A
Sbjct: 913 PREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPP----A 968
Query: 291 AKNTFQSKINQEELASGTPPARFPKA-PSKLTVGGPWGQSQEKEKGDKNSATP-----KQ 344
K + A P P++ P + P G +Q + ++ P +
Sbjct: 969 LKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQV 1028
Query: 345 KPLPPLFTL-----GPPP------PKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLP 393
P PP GPPP P + PP T SG + S G + +S P
Sbjct: 1029 APQPPFAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIA-GGSSCP 1087
Query: 394 PPP----------PSHPASQPPLPASHPSQPPV---PSLPPRNIKPPFDLKSPVNEDNQD 440
P P S PP P S +P V PS ++ + L N +
Sbjct: 1088 LPTVQIKEEALDDAEEPESPPPPPRSPSPEPTVVDTPSHASQSARFYKHLDRGYNSCART 1147
Query: 441 GVTHSDGAGNL----DEEQDSEGETYEDIEASKEREKKREKEEKKRLELEKKEQKEKEKK 496
+ AG+ EE + + + +A +ERE+++EKE+++ E E++ + E+ K
Sbjct: 1148 DLYFMPLAGSKLAKKREEAIEKAKREAEQKAREEREREKEKEKEREREREREREAERAAK 1207
Query: 497 EQEIKKKFKLTGP 509
+ +L+ P
Sbjct: 1208 ASSSAHEGRLSDP 1220
Score = 40.0 bits (92), Expect = 0.008
Identities = 87/428 (20%), Positives = 143/428 (33%), Gaps = 67/428 (15%)
Query: 47 PPAGPSNVPKFGSPK----PPVAVKPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRD 102
PP P +P+ +P+ PP PS P PP LKP + P++
Sbjct: 931 PPTTP--IPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPP-- 986
Query: 103 PEAKVGFLKPVGPKPINLPKEDSKPTFPWPPGNKP--SLHSVNQD-----HDLKPLGPK- 154
P + +P+ P P P PP + P LH V H P GP
Sbjct: 987 PLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPP 1046
Query: 155 -------SGPTPPTSENEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKPAFGQKPPLSTE 207
S TPP Q P +G ++ + P P K + +
Sbjct: 1047 ITPPTCPSTSTPPAGPGTSAQ--PPCSGAA----ASGGSIAGGSSCPLPTVQIKEE-ALD 1099
Query: 208 NSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKPAR-----EDSENKDHAGEISSLPFPGV 262
++ E ESP S SP P V + S + AR + N ++ +P G
Sbjct: 1100 DAEEPESPPPPPRSP--SPEPTVVDTPSHASQSARFYKHLDRGYNSCARTDLYFMPLAGS 1157
Query: 263 VLKPAASRGGPGLSKNGEEK-KEDRKIDAAKNTFQSKINQEELASGTPPARFPKAPSKLT 321
L + E+K +E+R+ + K + + + E R + +K +
Sbjct: 1158 KLAKKREEAIEKAKREAEQKAREEREREKEKEKERERERERE--------REAERAAKAS 1209
Query: 322 VGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTS 381
G+ + + P +P P PP P+ P L+++ + + T+
Sbjct: 1210 SSAHEGRLSDPQLSGPGHMRPSFEPPPTTIAAVPPYIGPDTPALRTLSEYARPHVMSPTN 1269
Query: 382 KGQTSYSTTSLPPPPPSHPASQPPLPASHPSQPPVPSLPPR----------------NIK 425
+ Y P P+ P +P + P + R +K
Sbjct: 1270 RNHPFYM-----PLNPTDPLLAYHMPGLYNVDPTIRERELREREIREREIRERELRERMK 1324
Query: 426 PPFDLKSP 433
P F++K P
Sbjct: 1325 PGFEVKPP 1332
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 57.8 bits (138), Expect = 4e-08
Identities = 121/553 (21%), Positives = 189/553 (34%), Gaps = 73/553 (13%)
Query: 22 RVTGPNSSSGIQARKNLFNNQGNASPPA----GPSNVPKFGSPKPPVAVKPSSEEKPDKE 77
R P+ G + N++G++ P S P SP+ + SS ++ +
Sbjct: 676 RPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQ 735
Query: 78 PKPPFLK-PTG-----AGQRFGTPASLTTRDPEAKVGFLKPVG-PKPINLPKEDSKPTFP 130
+PP L+ PTG + GTP L T P + P G P P + PT P
Sbjct: 736 AQPPALQAPTGVTPAPSSAPPGTP-QLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAP 794
Query: 131 WP-----------PGNKPSLHSVNQDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGV--- 176
P P PS H PL P +G S Q P L G
Sbjct: 795 VPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQ--PPLHGQGPP 852
Query: 177 ------KGKFMSASQDLEPKPLFPKPAFGQKPPLSTENSHEDESPMKNVSSSKGSPAPLG 230
G + +P L P+ + GQ P ++ + + ++ +S +
Sbjct: 853 GPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQP 912
Query: 231 VRSKSGPLKPAREDSENKDHAGEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDA 290
R + P P I LP P P G S N A
Sbjct: 913 PREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPP----A 968
Query: 291 AKNTFQSKINQEELASGTPPARFPKA-PSKLTVGGPWGQSQEKEKGDKNSATP-----KQ 344
K + A P P++ P + P G +Q + ++ P +
Sbjct: 969 LKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQV 1028
Query: 345 KPLPPLFTL-----GPPP------PKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLP 393
P PP GPPP P + PP T SG + S G + +S P
Sbjct: 1029 APQPPFAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIA-GGSSCP 1087
Query: 394 PPP----------PSHPASQPPLPASHPSQPPV---PSLPPRNIKPPFDLKSPVNEDNQD 440
P P S PP P S +P V PS ++ + L N +
Sbjct: 1088 LPTVQIKEEALDDAEEPESPPPPPRSPSPEPTVVDTPSHASQSARFYKHLDRGYNSCART 1147
Query: 441 GVTHSDGAGNL----DEEQDSEGETYEDIEASKEREKKREKEEKKRLELEKKEQKEKEKK 496
+ AG+ EE + + + +A +ERE+++EKE+++ E E++ + E+ K
Sbjct: 1148 DLYFMPLAGSKLAKKREEAIEKAKREAEQKAREEREREKEKEKEREREREREREAERAAK 1207
Query: 497 EQEIKKKFKLTGP 509
+ +L+ P
Sbjct: 1208 ASSSAHEGRLSDP 1220
Score = 40.0 bits (92), Expect = 0.008
Identities = 87/428 (20%), Positives = 143/428 (33%), Gaps = 67/428 (15%)
Query: 47 PPAGPSNVPKFGSPK----PPVAVKPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRD 102
PP P +P+ +P+ PP PS P PP LKP + P++
Sbjct: 931 PPTTP--IPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPP-- 986
Query: 103 PEAKVGFLKPVGPKPINLPKEDSKPTFPWPPGNKP--SLHSVNQD-----HDLKPLGPK- 154
P + +P+ P P P PP + P LH V H P GP
Sbjct: 987 PLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPP 1046
Query: 155 -------SGPTPPTSENEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKPAFGQKPPLSTE 207
S TPP Q P +G ++ + P P K + +
Sbjct: 1047 ITPPTCPSTSTPPAGPGTSAQ--PPCSGAA----ASGGSIAGGSSCPLPTVQIKEE-ALD 1099
Query: 208 NSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKPAR-----EDSENKDHAGEISSLPFPGV 262
++ E ESP S SP P V + S + AR + N ++ +P G
Sbjct: 1100 DAEEPESPPPPPRSP--SPEPTVVDTPSHASQSARFYKHLDRGYNSCARTDLYFMPLAGS 1157
Query: 263 VLKPAASRGGPGLSKNGEEK-KEDRKIDAAKNTFQSKINQEELASGTPPARFPKAPSKLT 321
L + E+K +E+R+ + K + + + E R + +K +
Sbjct: 1158 KLAKKREEAIEKAKREAEQKAREEREREKEKEKERERERERE--------REAERAAKAS 1209
Query: 322 VGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTS 381
G+ + + P +P P PP P+ P L+++ + + T+
Sbjct: 1210 SSAHEGRLSDPQLSGPGHMRPSFEPPPTTIAAVPPYIGPDTPALRTLSEYARPHVMSPTN 1269
Query: 382 KGQTSYSTTSLPPPPPSHPASQPPLPASHPSQPPVPSLPPR----------------NIK 425
+ Y P P+ P +P + P + R +K
Sbjct: 1270 RNHPFYM-----PLNPTDPLLAYHMPGLYNVDPTIRERELREREIREREIRERELRERMK 1324
Query: 426 PPFDLKSP 433
P F++K P
Sbjct: 1325 PGFEVKPP 1332
>gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens]
Length = 1303
Score = 57.4 bits (137), Expect = 5e-08
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 391 SLPPPPPSHPASQPPLPASHPSQPPVPSLPPRNIKPPFDLKSPVNEDNQDGVTHSDGAGN 450
S PPP P P++ P P S ++P P L + P D + + + ++G DGA
Sbjct: 15 SPPPPSPPPPSTPSPPPCSPDARPATPHLLHHRLPLPDDRE---DGELEEGELEDDGA-- 69
Query: 451 LDEEQDSEGETYEDIEASKEREKKREKEEKKRLELEKKEQKEKEKKEQEIKKKFK 505
+E QD+ G + E+ EEK L++K +KE+EK+++ KK+ K
Sbjct: 70 -EETQDTSGGPERSRKEKGEKHHSDSDEEKSHRRLKRKRKKEREKEKRRSKKRRK 123
Score = 41.2 bits (95), Expect = 0.004
Identities = 98/443 (22%), Positives = 146/443 (32%), Gaps = 102/443 (23%)
Query: 46 SPPAGPSNVPKFGSPKPPV-------AVKPSSEEKP-DKEPKPPFLKPTGAGQRFG-TPA 96
S P GPS+ GS PP A++ + P D P P P Q+F
Sbjct: 907 SSPVGPSSSK--GSGPPPTEEEEGERALREKAVNIPLDPLPGHPLRDPRSQLQQFSHIKK 964
Query: 97 SLTTRDPE-AKVGFLKPVGPKPINLPKEDSKPTFPWPPGNKPSLH-SVNQDHDLKPLGPK 154
+T P A+ P P+ +PK+D+ P P + P+L +++ P +
Sbjct: 965 DVTLSKPSFARTVLWNPEDLIPLPIPKQDAVPPVPAALQSMPTLDPRLHRAATAGPPNAR 1024
Query: 155 SGPTPPTSENEQKQAFPK-------LTGVKGKFMSASQDLEPKPLFPKPAFGQKPPLSTE 207
P T + Q P L V SA+ KP P+ P
Sbjct: 1025 QRPGASTDSSTQGANLPDFELLSRILKTVNATGSSAAPGSSDKPSDPRVRKAPTDP---- 1080
Query: 208 NSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKPAREDSENKDHAGEISSLPF-PGVVLKP 266
+ P + +SS+ +K GP + + A ++ P+ P V+
Sbjct: 1081 ---RLQKPTDSTASSRA--------AKPGPAEAPSPTASPSGDASPPATAPYDPRVLAAG 1129
Query: 267 AASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELASGTP--PARFPKAPSKLT--V 322
+GG G Q + SG R P A K T
Sbjct: 1130 GLGQGGGG-------------------------GQSSVLSGISLYDPRTPNAGGKATEPA 1164
Query: 323 GGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTSK 382
Q + E K+SA+ K PP V + + +G + +
Sbjct: 1165 ADTGAQPKGAEGNGKSSAS-----------------KAKEPPFVRKSALEQPETGKAGAD 1207
Query: 383 GQT---SYSTTSLPPP----PPSHPASQPPLPASHPSQP-----PVPSL-------PPRN 423
G T Y++ + P P P+ + PP P P QP PVP+L P
Sbjct: 1208 GGTPTDRYNSYNRPRPKAAAAPAATTATPP-PEGAPPQPGVHNLPVPTLFGTVKQTPKTG 1266
Query: 424 IKPPFDLKSPVNEDNQDGVTHSD 446
PF SP E QD + D
Sbjct: 1267 SGSPFAGNSPAREGEQDAASLKD 1289
Score = 34.3 bits (77), Expect = 0.46
Identities = 27/85 (31%), Positives = 32/85 (37%), Gaps = 11/85 (12%)
Query: 330 QEKEKGDKNSATPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTSKGQTSYST 389
+E E+ K P KP PP L P PP+P P TS +G
Sbjct: 494 KEVEELKKQGINPLPKP-PPGVGLLPTPPRPPGPQA-------PTSPNGRPMQGGPPPPP 545
Query: 390 TSLPPPPPSHPASQPPLPASHPSQP 414
PPPPP Q P+P P P
Sbjct: 546 ---PPPPPPPGPPQMPMPVHEPLSP 567
Score = 32.0 bits (71), Expect = 2.3
Identities = 114/507 (22%), Positives = 164/507 (32%), Gaps = 156/507 (30%)
Query: 48 PAGPSNVPKFGSPKPPVAVKPSSEEKPD-----KEPKPP-------------------FL 83
P P+ P G P PP P P EP P +
Sbjct: 529 PTSPNGRPMQGGPPPPPPPPPPPPGPPQMPMPVHEPLSPQQLQQQDMYNKKIPSLFEIVV 588
Query: 84 KPTG-----AGQRFGTPASLTTRDPEAKVGFLKPVGPKP-INLPKEDSKPTFP-WPPGNK 136
+PTG G RF P G P+GP P + P P P P
Sbjct: 589 RPTGQLAEKLGVRFPGPG-----------GPPGPMGPGPNMGPPGPMGGPMHPDMHPDMH 637
Query: 137 PSLH-SVNQD-HDLKPLGPKSGPTPPTS------------------------------EN 164
P +H ++ D H P+GP P PP EN
Sbjct: 638 PDMHPDMHADMHADMPMGPGMNPGPPMGPGGPPMMPYGPGDSPHSGMMPPIPPAQNFYEN 697
Query: 165 EQKQA------------------FPKLTGVKGKFMSASQDLEP-------KPLFPKPAFG 199
+Q + +L G G+ + LEP P PKP G
Sbjct: 698 FYQQQEGMEMEPGLLGDAEDYGHYEELPGEPGEHLFPEHPLEPDSFSEGGPPGRPKPGAG 757
Query: 200 QKPPLST-----------ENSHEDESPMKNVSSSK--------------GSPAPLGVRSK 234
L + + E+E + SSK S G S
Sbjct: 758 VPDFLPSAQRALYLRIQQKQQEEEERARRLAESSKQDRENEEGDTGNWYSSDEDEGGSSV 817
Query: 235 SGPLKPAREDSENKDHA--GEISSLPFPGVVLK---PAASR-GGPGLSKNGEEKKEDRKI 288
+ LK R+ + ++ A GE+SS L+ P SR P LS+ + + R +
Sbjct: 818 TSILKTLRQQTSSRPPASVGELSSSGLGDPRLQKGHPTGSRLADPRLSR---DPRLTRHV 874
Query: 289 DAA--KNTFQSKINQEELASGTPPAR-------FPKAPSKLTVGGPWGQSQEKEKGDKNS 339
+A+ S + LA P ++ P PS GP E+E+G++ +
Sbjct: 875 EASGGSGPGDSGPSDPRLARALPTSKPEGSLHSSPVGPSSSKGSGP--PPTEEEEGER-A 931
Query: 340 ATPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTSKGQTS----YSTTSLPPP 395
K +P L P P P R P L +F + SK + ++ L P
Sbjct: 932 LREKAVNIP----LDPLPGHPLRDPRSQLQQFSHIKKDVTLSKPSFARTVLWNPEDLIPL 987
Query: 396 PPSHPASQPPLPASHPSQPPVPSLPPR 422
P + PP+PA+ S +P+L PR
Sbjct: 988 PIPKQDAVPPVPAALQS---MPTLDPR 1011
Score = 31.6 bits (70), Expect = 3.0
Identities = 25/95 (26%), Positives = 35/95 (36%), Gaps = 8/95 (8%)
Query: 346 PLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSL---PPPPPSHPAS 402
P PP PPPP P PP + + S + + SL P A
Sbjct: 542 PPPP-----PPPPPPPGPPQMPMPVHEPLSPQQLQQQDMYNKKIPSLFEIVVRPTGQLAE 596
Query: 403 QPPLPASHPSQPPVPSLPPRNIKPPFDLKSPVNED 437
+ + P PP P P N+ PP + P++ D
Sbjct: 597 KLGVRFPGPGGPPGPMGPGPNMGPPGPMGGPMHPD 631
>gi|54112403 chromodomain helicase DNA binding protein 7 [Homo
sapiens]
Length = 2997
Score = 57.0 bits (136), Expect = 7e-08
Identities = 113/519 (21%), Positives = 185/519 (35%), Gaps = 112/519 (21%)
Query: 47 PPAGPSNVPKFGSPKPPVAVKPSSEEKPDK--------EPKPPFLKP--TGAGQRFGTPA 96
PP P + PP V+P S P + P+P P G GQR P
Sbjct: 394 PPMSPMKAMSNPAGTPPPQVRPGSAGIPMEVGSYPNMPHPQPSHQPPGAMGIGQRNMGPR 453
Query: 97 SLT--------TRDPEAKVGFLKPVGPKPINL--PKEDSKPTFPWP--PGNKPSLHSVNQ 144
++ + P G ++P G + L P+ + P PG +PS +
Sbjct: 454 NMQQSRPFIGMSSAPRELTGHMRPNGCPGVGLGDPQAIQERLIPGQQHPGQQPSFQQLPT 513
Query: 145 DHDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKPAFGQKPPL 204
L+P + P + Q A L P P QK P+
Sbjct: 514 CPPLQPHPGLHHQSSPPHPHHQPWA----------------QLHPSPQNTP----QKVPV 553
Query: 205 STENSHED--ESPMKNVSSSKGSPAPLGVRS-------KSGPLKPAREDSEN----KDHA 251
+ E E P+ +++ G A L V+S + P + ++ N +D +
Sbjct: 554 HQHSPSEPFLEKPVPDMTQVSGPNAQL-VKSDDYLPSIEQQPQQKKKKKKNNHIVAEDPS 612
Query: 252 GEISSLPFPGVVLKPAASRGGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELASGTPPA 311
FPG V +R L + EEKK+ ++ A K+ + K +E+ P
Sbjct: 613 KGFGKDDFPGGVDNQELNRNS--LDGSQEEKKKKKRSKAKKDPKEPKEPKEKKEPKEP-- 668
Query: 312 RFPKAPSKLTVGGPWGQSQEKEKGDKNSATPKQKPLPPLFTLGPPPPKPNRPPNVDLTKF 371
+ PKAP + KEK K +ATPK K N+ P+ + +
Sbjct: 669 KTPKAPKI--------PKEPKEKKAK-TATPKPKS---------SKKSSNKKPDSEASAL 710
Query: 372 HKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPPLPASHPSQPPVPSLPPRNIKPPFDLK 431
K + T + S + PP PP P + S+ + + DL+
Sbjct: 711 KKKVNKGKTEGSENSDLDKTPPPSPPPEEDEDPGVQKRRSSR------QVKRKRYTEDLE 764
Query: 432 SPVNEDNQDGVTHSDGAGNLDEEQDSEGETYEDIEAS--------KEREKKREKEEKKRL 483
++++ D +D AG S+ E E ++A R K++KE + +
Sbjct: 765 FKISDEEAD---DADAAGRDSPSNTSQSEQQESVDAEGPVVEKIMSSRSVKKQKESGEEV 821
Query: 484 ELEK-----------------KEQKEKEKKEQEIKKKFK 505
E+E+ E EK+K+ Q+ K+FK
Sbjct: 822 EIEEFYVKYKNFSYLHCQWASIEDLEKDKRIQQKIKRFK 860
Score = 48.5 bits (114), Expect = 2e-05
Identities = 83/364 (22%), Positives = 133/364 (36%), Gaps = 40/364 (10%)
Query: 161 TSENEQKQAFPKLTGVKGKFMSASQDL-EPKPLFPKPAFGQ--------KPPLSTENSHE 211
T+ Q+ P+ G ++ Q L +P+ P + Q P T S
Sbjct: 335 TNNTPMNQSVPRYPNAVGFPSNSGQGLMHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPP 394
Query: 212 DESPMKNVSSSKGSPAPLGVRSKSG-PLKPAREDSENKDHAGEISSLPFPGVVLKPAASR 270
SPMK +S+ G+P P +G P++ G ++P P +P +
Sbjct: 395 PMSPMKAMSNPAGTPPPQVRPGSAGIPME-----------VGSYPNMPHPQPSHQPPGAM 443
Query: 271 GGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELASGTPPARF--PKAPSKLTVGGPWGQ 328
G G G + + ++ ++ +G P P+A + + G
Sbjct: 444 G-IGQRNMGPRNMQQSRPFIGMSSAPRELTGHMRPNGCPGVGLGDPQAIQERLIPGQQHP 502
Query: 329 SQEKEKGDKNSATPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTSK---GQT 385
Q+ + P Q P P L PP P+ P L S N+ K Q
Sbjct: 503 GQQPSFQQLPTCPPLQ-PHPGLHHQSSPP-HPHHQPWAQL----HPSPQNTPQKVPVHQH 556
Query: 386 SYSTTSLPPPPPSHPASQPPLPASHPSQPPVPSLP--PRNIKPPFDLKSPVNEDNQDGVT 443
S S L P P P S +PS+ P+ K V ED G
Sbjct: 557 SPSEPFLEKPVPDMTQVSGPNAQLVKSDDYLPSIEQQPQQKKKKKKNNHIVAEDPSKGFG 616
Query: 444 HSDGAGNLDEEQDSEGETYEDIEASKEREKKREKEEKKRLELEKKEQKE-KEKKEQEIKK 502
D G +D ++ + ++ S+E +KK+++ + K+ E KE KE KE KE + K
Sbjct: 617 KDDFPGGVDNQELNRNS----LDGSQEEKKKKKRSKAKKDPKEPKEPKEKKEPKEPKTPK 672
Query: 503 KFKL 506
K+
Sbjct: 673 APKI 676
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.306 0.130 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,597,701
Number of Sequences: 37866
Number of extensions: 2944997
Number of successful extensions: 47405
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 1624
Number of HSP's that attempted gapping in prelim test: 18274
Number of HSP's gapped (non-prelim): 17599
length of query: 783
length of database: 18,247,518
effective HSP length: 110
effective length of query: 673
effective length of database: 14,082,258
effective search space: 9477359634
effective search space used: 9477359634
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.