Guide to the Human Genome
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Name: FRG2B Sequence: fasta or formatted (278aa) NCBI GI: 124487405
Description:

FSHD region gene 2 family, member B

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         20           2
 C cysteine            3.6         10           1
 D aspartate           3.6         10           1
 E glutamate           8.6         24           2
 F phenylalanine       2.2          6           1
 G glycine             5.8         16           1
 H histidine           3.2          9           2
 I isoleucine          2.5          7           1
 K lysine              7.2         20           2
 L leucine             6.5         18           2
 M methionine          1.4          4           1
 N asparagine          3.2          9           1
 P proline             6.5         18           2
 Q glutamine           6.5         18           2
 R arginine            6.1         17           1
 S serine             13.3         37           3
 T threonine           6.8         19           1
 V valine              3.6         10           1
 W tryptophan          0.7          2           1
 Y tyrosine            1.4          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FSHD region gene 2 family, member B 
LOC100288255          0.982   PREDICTED: hypothetical protein XP_002343930 
FRG2                  0.982   FSHD region gene 2 
LOC651959             0.948   PREDICTED: FSHD region gene 2-like 
LOC651959             0.948   PREDICTED: FSHD region gene 2-like 
FRG2C                 0.937   FSHD region gene 2 family, member C 
LOC100288801          0.458   PREDICTED: hypothetical protein XP_002342402 
LOC100128827          0.179   PREDICTED: similar to FSHD region gene 2 family, me...
LOC100128827          0.179   PREDICTED: similar to FSHD region gene 2 family, me...
LOC100128827          0.179   PREDICTED: similar to FSHD region gene 2 family, me...
ZRANB2                0.031   zinc finger protein 265 isoform 2 
ZRANB2                0.030   zinc finger protein 265 isoform 1 
RSRC2                 0.030   arginine/serine-rich coiled-coil 2 isoform a 
CYLC1                 0.028   cylicin, basic protein of sperm head cytoskeleton 1...
RSRC2                 0.028   arginine/serine-rich coiled-coil 2 isoform b 
TRIP12                0.028   thyroid hormone receptor interactor 12 
PRPF40A               0.026   formin binding protein 3 
SFRS4                 0.026   splicing factor, arginine/serine-rich 4 
CHGB                  0.026   chromogranin B precursor 
PHF2                  0.024   PHD finger protein 2 
AFF4                  0.024   ALL1 fused gene from 5q31 
CIR1                  0.022   CBF1 interacting corepressor 
PRPF38B               0.022   PRP38 pre-mRNA processing factor 38 (yeast) domain ...
SFRS17A               0.022   DNA segment on chromosome X and Y (unique) 155 expre...
SLTM                  0.022   modulator of estrogen induced transcription isoform ...
SLTM                  0.022   modulator of estrogen induced transcription isoform ...
USP31                 0.020   ubiquitin specific peptidase 31 
SR140                 0.020   U2-associated SR140 protein 
HTATSF1               0.018   HIV-1 Tat specific factor 1 
HTATSF1               0.018   HIV-1 Tat specific factor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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