Guide to the Human Genome
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Name: SH2D6 Sequence: fasta or formatted (175aa) NCBI GI: 38348280
Description:

SH2 domain containing 6

Referenced in:

B cells

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         12           2
 C cysteine            1.7          3           1
 D aspartate           3.4          6           1
 E glutamate           4.0          7           2
 F phenylalanine       2.9          5           1
 G glycine             6.9         12           2
 H histidine           4.6          8           1
 I isoleucine          1.1          2           1
 K lysine              1.7          3           1
 L leucine            13.7         24           4
 M methionine          1.7          3           1
 N asparagine          2.9          5           2
 P proline            13.1         23           4
 Q glutamine           3.4          6           1
 R arginine            8.0         14           2
 S serine             10.9         19           2
 T threonine           4.0          7           1
 V valine              4.6          8           1
 W tryptophan          1.1          2           1
 Y tyrosine            3.4          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SH2 domain containing 6 
BLNK                  0.230   B-cell linker isoform 2 
BLNK                  0.230   B-cell linker isoform 1 
LCP2                  0.140   lymphocyte cytosolic protein 2 
CLNK                  0.131   mast cell immunoreceptor signal transducer 
FRK                   0.061   fyn-related kinase 
PLCG2                 0.058   phospholipase C, gamma 2 
DAPP1                 0.055   dual adaptor of phosphotyrosine and 3-phosphoinosit...
PTPN11                0.044   protein tyrosine phosphatase, non-receptor type 11 [...
VAV3                  0.044   vav 3 guanine nucleotide exchange factor isoform 2 ...
VAV3                  0.044   vav 3 guanine nucleotide exchange factor isoform 1 ...
SH2B1                 0.044   SH2B adaptor protein 1 isoform 2 
SH2B1                 0.044   SH2B adaptor protein 1 isoform 3 
SH2B1                 0.044   SH2B adaptor protein 1 isoform 2 
SH2B1                 0.044   SH2B adaptor protein 1 isoform 1 
SH2B1                 0.044   SH2B adaptor protein 1 isoform 2 
SHC3                  0.041   src homology 2 domain-containing transforming prote...
MLL4                  0.041   myeloid/lymphoid or mixed-lineage leukemia 4 
SHD                   0.035   Src homology 2 domain containing transforming prote...
SH2D3A                0.035   SH2 domain containing 3A 
LOC100291393          0.035   PREDICTED: hypothetical protein XP_002347924 
SHC2                  0.035   SHC (Src homology 2 domain containing) transforming...
VAV2                  0.035   vav 2 guanine nucleotide exchange factor isoform 1 ...
VAV2                  0.035   vav 2 guanine nucleotide exchange factor isoform 2 [...
FMN1                  0.032   formin 1 
RASA1                 0.032   RAS p21 protein activator 1 isoform 1 
HRNBP3                0.032   hexaribonucleotide binding protein 3 
GMIP                  0.032   GEM interacting protein 
LMOD2                 0.029   leiomodin 2 (cardiac) 
IRS2                  0.029   insulin receptor substrate 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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