Guide to the Human Genome
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Name: SH2D3A Sequence: fasta or formatted (576aa) NCBI GI: 208609985
Description:

SH2 domain containing 3A

Referenced in:

Mammary Tissues
Non-Receptor Tyrosine Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.4         60           3
 C cysteine            1.7         10           1
 D aspartate           3.8         22           1
 E glutamate           8.0         46           4
 F phenylalanine       2.8         16           1
 G glycine             8.2         47           2
 H histidine           3.1         18           2
 I isoleucine          0.9          5           1
 K lysine              1.6          9           1
 L leucine            13.9         80           3
 M methionine          2.1         12           1
 N asparagine          1.2          7           1
 P proline             9.7         56           2
 Q glutamine           4.7         27           2
 R arginine           10.1         58           2
 S serine              6.4         37           2
 T threonine           4.2         24           2
 V valine              5.4         31           2
 W tryptophan          1.4          8           2
 Y tyrosine            0.5          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SH2 domain containing 3A 
BCAR3                 0.296   breast cancer antiestrogen resistance 3 
SH2D3C                0.254   SH2 domain containing 3C isoform e 
SH2D3C                0.254   SH2 domain containing 3C isoform d 
SH2D3C                0.254   SH2 domain containing 3C isoform b 
SH2D3C                0.254   SH2 domain containing 3C isoform a 
SH2D3C                0.201   SH2 domain containing 3C isoform c 
SH2D3C                0.201   SH2 domain containing 3C isoform c 
FES                   0.035   feline sarcoma oncogene isoform 2 
FES                   0.035   feline sarcoma oncogene isoform 1 
SHC1                  0.034   SHC (Src homology 2 domain containing) transforming...
SHC1                  0.034   SHC (Src homology 2 domain containing) transforming...
SHC1                  0.034   SHC (Src homology 2 domain containing) transforming...
SHC1                  0.034   SHC (Src homology 2 domain containing) transforming ...
FER                   0.032   fer (fps/fes related) tyrosine kinase 
SHC3                  0.026   src homology 2 domain-containing transforming prote...
LOC100291393          0.025   PREDICTED: hypothetical protein XP_002347924 
SHC2                  0.025   SHC (Src homology 2 domain containing) transforming...
CRK                   0.022   v-crk sarcoma virus CT10 oncogene homolog isoform a ...
CRK                   0.022   v-crk sarcoma virus CT10 oncogene homolog isoform b ...
ABL1                  0.021   c-abl oncogene 1, receptor tyrosine kinase isoform a...
ABL1                  0.021   c-abl oncogene 1, receptor tyrosine kinase isoform b...
SHC4                  0.021   rai-like protein 
ABL2                  0.021   arg tyrosine kinase isoform c 
ABL2                  0.021   arg tyrosine kinase isoform b 
ABL2                  0.021   arg tyrosine kinase isoform e 
ABL2                  0.021   arg tyrosine kinase isoform d 
ABL2                  0.021   arg tyrosine kinase isoform a 
GRAP2                 0.020   GRB2-related adaptor protein 2 
GRAP                  0.020   GRB2-related adaptor protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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